Aleu021109.1
Basic Information
- Insect
- Argyra leucocephala
- Gene Symbol
- ZFX
- Assembly
- GCA_963942445.1
- Location
- OZ012680.1:5278871-5283706[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.0038 0.53 12.0 3.0 1 23 419 441 419 441 0.96 2 15 0.00013 0.018 16.5 5.7 1 23 457 479 457 479 0.98 3 15 0.00021 0.03 15.9 3.8 1 23 485 508 485 508 0.93 4 15 0.48 68 5.3 2.1 1 23 514 538 514 538 0.88 5 15 4.9e-08 6.9e-06 27.3 3.4 1 23 544 567 544 567 0.98 6 15 7.1e-06 0.001 20.5 7.8 1 23 575 597 575 597 0.99 7 15 0.00065 0.092 14.3 0.3 1 23 603 625 603 625 0.98 8 15 0.00065 0.092 14.3 0.0 1 23 631 653 631 653 0.98 9 15 2.4e-05 0.0035 18.8 1.9 1 23 766 788 766 788 0.98 10 15 0.0053 0.76 11.5 7.8 1 23 794 817 794 817 0.95 11 15 5.3 7.5e+02 2.0 0.3 1 12 823 836 823 844 0.90 12 15 2.1e-07 3e-05 25.3 2.3 1 23 853 876 853 876 0.98 13 15 0.022 3.1 9.6 8.4 1 23 884 906 884 906 0.96 14 15 0.00022 0.03 15.9 0.1 3 23 914 934 912 934 0.98 15 15 0.00021 0.03 15.9 0.1 1 23 940 962 940 962 0.98
Sequence Information
- Coding Sequence
- atgagctcacttaaaaaaaagaaaaacgcaaaaacaaatttagataaGGAATATGAATCGCAATTAATTgcagaaataaagaaaagacCATATCTTTATGATAGAACTCATGAATTTTACTCTGAAATTCAGCTTCGTACTGATGCATGGCAAGCAATTTcagaagaattaaataaatcggtcAACGAAGTTAAGAAAAAATGGGAAACTTTAAGGGATAGTTACAGAaggtttcataaaaaaattaatcataatctAAACGAAGAAAATTCTATAAAAGAATGGATTCATTATGAAAATATGGAATTTTTGAATGGtcatattaaaataGATCATGGTTTGTCATCTGAACAagttgaaaaacagaaaaaattcgATGCTAAATTAATATCAGAAGTAGTTAAGCATAAAAGTTTATATGATCCAATGGATGAAGCTTTTAGAAATATGAAAGAACGAGCAATCACTTGGGaagaaatttctaaaattatgaattcatctgTTGAAGTATGTAAAAAAAGATGGAATTATTCCAGAGATACATTTAGAAAATtccataaaaaagaaattaaagataataaaaaaattaactggaTTCATTACAACAGTTTgaagtttttattgaaatatgattCTGCAaataattctGATTTAAAACCACCTCATACTTACAATCCATCTAAACCAAAAATTCCAccggaattaaaaattttacctttGCTAAATGATATTTCAAtgaaattcgaaaataatattttggatGAAGAAGTAAAATTAGActgtaatttagaatatttagaaaaacaaaaatgtggagaaattctaataacaaaaactggaattttttcatataaatgctGCATTTGTAATGATAATATgggaaaaattgacaattttgttGAACATATGTTAGAAAGTCACATGGGTCGAAATggaaatatttctatattcaaAATGCATCCTAATGATAATCTAGAAAATAATGAAactgatgatgaagatgattaCTTCAATGATATTacaaataatgatgatgattcaaatgaagaaaaaatttcggatgatgaaacaaataattcgacaatgaaaaatgttataaagaaattacctttaaaatatataaaaaatgaaaaaagaaaaaaatcacttacagaagaagatttaaaagaaaattccagTGATGATTTAGAAACGGCTACTTTAAAACGaattaaaagacaaaataaattagttaaaattaaaaaaattggtaaatatcCTTGCAATATGTGTTCTTTTTCGTTTGATAAAGAAGAGAATTTGCATAAGCATAAAGAATATCATAGAAAAGCTATACcttatatttttgaacaaaaaaaaggacGTGTATTTCGATGTGATGAATGTGATAGAAGATTTCAATATCGACATCAATTGCAAAAACATAAACGTTTACATACTGGTGAACGACCATATCAGTGTACGATATGTGAACAAAAATTTAGGcattatgataatttaaaagaacATTATATTTTTCGACATACAGAGGACAGACCttattCATGTAGACATGATGgttgtgataaaaaatttaaaacaattaaaactagAACAGAGCATGAAGCTCTTCACAGTACCGATTTACCATTCCAATGTGATGAATGTGGTAAATGTTTTCCAagaaatagttatttaaaaaggcATCGAAATACATGGCATATGGATAAAAATGATCGACCGTATAAATGCCCTCATTGTACAAAATCATTTTGTAcccaacaaaatttaaaatatcatatttacaCACATACTGGAGAAAGACCATTTAGTTGCCCAAATTGTccatcaaaatttacaaaacctTGGACAATCAAAGAACATATGAAAATACATTCTGGTGAAAGAAATTATGTTTGTCTGGTGTGTGGTGCAGCTTTCAATCAAATAGCAGGATTAATAAAGCATAAAAAAAGACATGAACTAAAAATACATTTCGAATCAAATAACAGTAGTTCTACAATATTAGAAAATCAATTATCCATTCAAAATGCAGCTAAAGAAATTGAATTAGATCATGATTTTCCATTTGAGAGCacagaaattgaaattaactaCAAAAATGAATCCAATGAAATGCCAGTAAATGAAGAACCAATAAGTGAAAAAAATGGTCAAATAAtttcattagaaaataaatttttgaaacaagaaacaaattacaaaaagaaaagagGAAGAAAAAAACTTCAAGAACTATCAGCGAATTGTTTTGACAcaaaatctgaaaaaattaaagattcaaAACGTGGTATTTTTTCATGTGAACAATGTGATAGAATATTTGAATATCAAAGTCAATTATATCGTCATAAACGTTTGCATACTACAGATAGACCATATAAATGTGAAGTTTGTGAACAAACATTTAGACATCATCGTAATTTAAAAGATCATTTTTCAGTTTGTCATACTGAAGAGAGACcgTTTCCTTGCAGACACGAaggatgtaataaaaattttaaaacagttcGAATACGTAAATTACATGAAATATTACATACAAATGATTTACCATTTCAATGTCAAGATTGCGGTAAATGTTTTCCACAAAGTAGTTATTTAATAACACATCGAAATACATGGCATGTAGATAAGAAAAATCGACGACACAAGTGTGAACATTgtgaaaaaacattttattcaaaacaaaatttaaaatttcatacatatacacatactgGAGAACGACCTTACGGATGTCCAGTTTGTCCAACAAGATTTACGAAACCATGGAGCGTCAAGGAACATATGAAAATACATTCTGGTGAACGAAATTATGTTTGTCAGGTGTGTGGTGCAGCTTTTAATCAAATAGCAggattaataaaacataaaaaaagacatgaagaaattttggaataa
- Protein Sequence
- MSSLKKKKNAKTNLDKEYESQLIAEIKKRPYLYDRTHEFYSEIQLRTDAWQAISEELNKSVNEVKKKWETLRDSYRRFHKKINHNLNEENSIKEWIHYENMEFLNGHIKIDHGLSSEQVEKQKKFDAKLISEVVKHKSLYDPMDEAFRNMKERAITWEEISKIMNSSVEVCKKRWNYSRDTFRKFHKKEIKDNKKINWIHYNSLKFLLKYDSANNSDLKPPHTYNPSKPKIPPELKILPLLNDISMKFENNILDEEVKLDCNLEYLEKQKCGEILITKTGIFSYKCCICNDNMGKIDNFVEHMLESHMGRNGNISIFKMHPNDNLENNETDDEDDYFNDITNNDDDSNEEKISDDETNNSTMKNVIKKLPLKYIKNEKRKKSLTEEDLKENSSDDLETATLKRIKRQNKLVKIKKIGKYPCNMCSFSFDKEENLHKHKEYHRKAIPYIFEQKKGRVFRCDECDRRFQYRHQLQKHKRLHTGERPYQCTICEQKFRHYDNLKEHYIFRHTEDRPYSCRHDGCDKKFKTIKTRTEHEALHSTDLPFQCDECGKCFPRNSYLKRHRNTWHMDKNDRPYKCPHCTKSFCTQQNLKYHIYTHTGERPFSCPNCPSKFTKPWTIKEHMKIHSGERNYVCLVCGAAFNQIAGLIKHKKRHELKIHFESNNSSSTILENQLSIQNAAKEIELDHDFPFESTEIEINYKNESNEMPVNEEPISEKNGQIISLENKFLKQETNYKKKRGRKKLQELSANCFDTKSEKIKDSKRGIFSCEQCDRIFEYQSQLYRHKRLHTTDRPYKCEVCEQTFRHHRNLKDHFSVCHTEERPFPCRHEGCNKNFKTVRIRKLHEILHTNDLPFQCQDCGKCFPQSSYLITHRNTWHVDKKNRRHKCEHCEKTFYSKQNLKFHTYTHTGERPYGCPVCPTRFTKPWSVKEHMKIHSGERNYVCQVCGAAFNQIAGLIKHKKRHEEILE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -