Aleu015439.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Argyra leucocephala
Gene Symbol
-
Assembly
GCA_963942445.1
Location
OZ012679.1:41548510-41556547[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 1.7 2.4e+02 3.6 1.0 2 23 164 186 164 186 0.92
2 22 0.00034 0.048 15.3 4.8 1 23 204 226 204 226 0.99
3 22 0.045 6.3 8.6 2.0 2 23 318 339 317 339 0.97
4 22 0.076 11 7.8 2.6 2 23 346 367 345 368 0.95
5 22 0.87 1.2e+02 4.5 0.6 2 23 418 439 417 439 0.88
6 22 0.002 0.29 12.8 0.7 1 21 445 465 445 466 0.96
7 22 3.7e-05 0.0052 18.3 3.2 1 23 523 545 523 545 0.99
8 22 0.00011 0.015 16.8 1.0 1 23 550 573 550 573 0.97
9 22 7.4e-05 0.011 17.3 2.4 1 23 637 659 637 659 0.99
10 22 0.00049 0.069 14.7 1.5 2 23 664 686 663 686 0.93
11 22 0.0053 0.75 11.5 1.4 2 23 763 783 763 783 0.98
12 22 3.8e-05 0.0054 18.2 1.5 2 23 791 813 790 813 0.93
13 22 0.028 4 9.2 2.4 1 23 853 877 853 877 0.96
14 22 0.0012 0.17 13.5 7.3 1 23 881 903 881 903 0.97
15 22 0.00077 0.11 14.1 0.8 1 22 909 930 909 930 0.96
16 22 0.00014 0.02 16.4 0.4 1 20 945 964 945 966 0.94
17 22 0.34 48 5.8 0.1 2 21 1004 1023 1004 1024 0.93
18 22 0.0011 0.16 13.6 1.2 1 22 1067 1088 1067 1088 0.95
19 22 0.0017 0.25 13.0 0.6 1 23 1152 1175 1152 1175 0.97
20 22 0.0028 0.39 12.4 0.3 1 22 1233 1254 1233 1254 0.97
21 22 6.1e-05 0.0087 17.6 2.3 1 21 1282 1302 1282 1303 0.96
22 22 9.9e-05 0.014 16.9 0.8 1 22 1374 1395 1374 1395 0.96

Sequence Information

Coding Sequence
ATGGGACGAACTCATTAttatgataatgaaaaaaaaactaatcgaTATCCCATAGAAAATATAGTCTCTGTTGCAACTTTTTCATTAGCAGTTTGTTCCActccaattgaaaaaaatgaacCTAATATTAGAAGAACACGAAGTTATTCCTATGAAAATTCTGAAATAGGAAAAACTAAGAGGGTTACTGAATCTACTTCTCATAAACAGTCACAGTCAGTTCAGGATGGTTTTAATAATCCATTATCTACATTTTCAATCAAAGAAAGTCCGAAGTATGCTGTAAAATCAACAACTccaattattataacaaaatcttcTGGAATTTATTCAGCTTCAAATAAATATACAGGATCTACAATTCCACATGGTATTTCGAAGATTTCTAGTGGTCCTGTAATAAAAGCATCAGCTACAATTGCAGAAATATCGAATATTGAAACATCTGAAGAAATCAACATTAATGCTGCGCCAGAACAAATACCAGGAAGTTGTCCATATTGTccagtaaaatttcaaaaaatgaaatatttgaattttcactTACAAAAATATCATCCAGAAAAAATGCatgaaaatgaaatggaaaTTCTTGAATCAGGAAATTGTTACAAAtgtgaattttgtaaaatgatatttagaagacttgatttttataaaaaacacatGAGAAAACATCCAAGAAATAGATATAAATCTGTTTATGATGGTATTTCTTTAACACTTAAAAAGGAAAAGCTTCAGGATgacaaagatataaaaaatatggcaattttaaaaaatgaatatttggtGCAACatgaattcaaaaaagaattggaaaaaCAAGATTCAAATTCTATTAATCCTGAATTATTTTTGTCTGATTCTAATATTGAggatataaatttcaaaaaaaatttggaatccAAAAAACctcaaaaatccaaaaataaatcaaaaaaaaaattgaaatgtcaatATTGTGGTAAAACAGTACTGAAATTATATCATTTAATATTGCATGAACGTAAACATAAAGCGGGCAGCTCAGTTAAATGTCGTGTGTGCGAACAACGATACTATATTAGAAGTACATATGAAAACCATATGAATCGTCATCATCCAGAAGTGGAATATGAACTTACTgaagatgaaataaaacaattatccTGGCGAAAAAATTTGGTATCTACGGAAAAGCTTCAAAAACCAGATCATGTTATTCAGCATCAAATGGAAAAAACCGAAACACCAATTGTTAAAAGTAAAAGCTGTAGCTTTtgtccaaaaatttttaaaacggtTGAATATAGAGTTTTACATGAAAAAGCACATACTGGTACTGGTAATTTTACTTGTAAATATTgtgaacaaaaattcaattctatAGGAACTTTATGGTCACATCagagaaattgttttaaaaaattagaggATGAAAATATTGAAGTAAGAGAAACACGATTAAGATCAGAAAAaagagagaaagaaaaattagatgACGATAAAAAAGGAACTGAGTTCAGTCAACTTCCCACCGAAAGTATAAAATTAGAACGAgaaaagttttctttaaaatctcATTTTAAGTGTACATATTGCAAAAAACTCTTTACTAgaaAATCAAATTGGGTTGATCATGTTCGTAAACATACTGGcgaaaaatttgaatgtaataTTTGTGATTATAAAACAACCagtccattttatttaaaatcacatATGTTAAAAATACATGATTATAGCAAAGCAAATAAAAGCatcacaaaagaaaaagaatcaGGCAATGCAGCAAATTTAAATACCGCAATAGAAGTTGCGACAAAAACTTCACtacttaaatctaaattattattacaatcgTTAGCTAAATTTGATTCAATCACATCTGAAGAAAAAGCTGAAAGTTTTAtacgattaaaattatttaaatgtaaattttgccaagaggtttatacaaaaaaatatgatctaGAGGAGCATTTAAAAACACACTTAAAgaTTTTGAAATGTCAATCTTGTGAAAAGGTTTTCAGACGCTTAAAAAACTTAAGAACACATGAAAATTTAATGcataatgaaaatgatataaatCTTGATAAAGAAAATGAGGTAGCTAAGAGCGTTCACATGAATGATAAACTTTCGTACGAAAACTGTCAAAAATCAAATGAACTTGAGAAAATTTTACCAGAATCAAATCAAATTGTAGATAACATTAAAGAGAAAGCAACAATAGAAGACAAATCTATAACATttgaacaaatggaaaatcCAAATGACCCTAATTGGAAAGTAAAAGAACAATGTAAAATATGTAgagaaaattttgacaacaattaTTTAACCACTCatatgaaaatacataaaattgataaaaatcgtcaaaaatgtgatttttgcgatcgtacttttaaatttaaaagtaatttaattcgTCATACGTTAGCTGATCATAACACAACAAAATTTCCTTCTCCAAATGCTACTTCAACTCCAacaaataaatccaaaaaaattactattcgTACGttactaaaagaaaataagataCCAACTATAAACGGTCCGCCTTTTGAATGTCCACATGAAAGTTGTAGTAAATCATTTGGACGACGCACAggttttaataaacattatttactgCATTTAGATACATTTAAGTGCAAGTATTGTAATAGgtgttttcaaacaaaaaaagttttacaaaaacatATCAATTTTCACATTGAAAATTTACCATACAAATGTAAGACATGTTCTAAAGCTTTTCCAGTGAAACATGCGCTTATTTGGCACAAACGTAGAAATAATTGTGGGAATCCCTTAGCAGAAGAATCGAGTATATCATATGATTGTGAAAAATGCTCAAAATCATTTATATCAAAATCAAGTCTTAGTCAACATTTATTAGAAGATTCTTGTGTATTTGTAAACAAGGATTCTAGCATTCCTGTAATAACTGGTTCAAAGTTACAAGAACCACCTTCATTGAATGATGACACAAAAATAAGCGAAATGAAACCAAAATGTGATTCAtgtggtaaaatttttttgagtccAGCTTATTTAGCTAtgcattataaaaaaacaaattgtgtctctcaaatttcaattcataaCGATGTAGATTTGAAGGATAATATTGAGAGTGATGTTCGATCTAATGATTCTAGCAATTCTTCTTGGATACATACACAAATTGGAGATTccaaatatatttgtaaaatttgctcTAAAAAGTTTAAGTCCAAACTGATGTTGTCTTGGCATACTAGAAGAAGAACATGTAAAGTATCCAGTGAATCATACGAAAGTAAGGACGAAgaagacaataataaaaatgaaaatagtccTACAAAAGATATTGCAAACAGTGCTAATAtggaacaaacaaaaattattccaGAAGACGAAAATCAAAATACTACATTACAAACTGATGAAAATATTgacaacaaaaaagaacaatatcAGTGTGAAGTTTGTTTGCGAATATTTGTTGTCAAAGGATTTCTTTTGAGACATATGAAATATTATCACCCACCTCTAATTGAAAAAGATTGTgtaaaagaaatgaaagaaaataataatacgaCAAATGATATAGAAAATACTAAGACTGAAAACGTGAGTACTGAAATTACAACTGACATAGAAGAGAATTACAATAGAAGGTCTACACGtaaaagaatagaaaatgaggatatcaaatttcaatgtcaaatatgcttgaaaaaatttgaaacgaAAGGTCTTTTAGCTGGTCACACTAGAACAAAGGCATGTTTTAAATCGAGCAGTTGTATGTCTACTTTAAGAGCACAAAAATCTCCTACAAAAGATGGAAATGATTCGTTACATAAGTGTAatctttgtaataaaatatttacaactgACGGACATTTAACCAATCATATGCGTAATCaagtatgtattattaaaaaagaaaatcaaaatataactctagataattcaaataatgttcaatcaaataatgatgaaaattcaACTGAAGTTAACAACACAATCACtgaagaaaacaaagaaaaatgtaCCACagattcaaatgaaaataaaattgaatctgttCTTGAAGGTTCAAATACTGTAATTGATTcatatgttgaaaaatattatacttgtaaaaaatgtaacaaacaATTTCCAACCAAAGTCTCATTAGCTTGGCATACTCGAAGAaaagaatgtttttataaaCGAAAGAAATTCAAAGTTAAAACTGCATTTGGATTAAATCCACAAGCaacaaaaattcgaaaaaagtTTATTGAAGGTATTGTAAGCTCTCGAAAAGTTAGTGCAGAACGAttgattttgcaaaaaaaaataaggaaagccGCTATTCAAGTTTATAAGCATAATAAAACCGTTACGGAAATGGCTAATAAATATCACATttctaaaactattatttatagaaaacttCATgcatttaaaagtttgaatgaGAGCACTGCAGATTGTAATATCGAGAATCTAGTAAATTCAGATCCAgcagaaattaaagaaaaagtaGAAGACAATGAACCGGACCcagaaattttcattaatgagCAGAACAAAATTGAAGATCATAATAAAACGAAACCGAAAATTGATTTGGGTGTTCTGCGAAacgaaaaagataaaaacatgGTAAGAGCAATCAGAAATTACATAAGAGACAGAAAAAAGGGTACAAAACTTCCACAGCGATTTTATTGTGACAGATATCAAATtcgaaaaatacatttttatcgAAAATTGTTCAAATTGGGTATGGTTAGAAAAAAAGGTAAGCCTAAGCGAGATCCGGAAAATAATTCTTCAGAAAACCtaaaattgcatataaataATGACAAAGTTGAAAATGAAAGTCAaagtattgtaaataaaactagTTGTTCATCACTAGAGTCGGATCTTTCACATATACATGAATTAGGGGAACATAAACGAAGAAAAGGCCGAAAGCCTAACAGTCCGGAAGAACTAGTACGGAAAGCTGTAATGGATTATCGTATGGGTAAAGGTACACAATTAGAAATGTGTGAAAAATATCAGGTTGGTATTTGGTCATTTCATCgcgtaaaaaaaatagttcaagaTGAAATGCCAGATCTAAAATTTCCTACCGcagaaaatgatgaaattataGAATCAAAAACTATGGAAAACATTGATAGTACTTCAATTTTAGAAGATAATTCTTCCCAATCTGCAACTAAAAAATCCGTTACAAACTTACAgttgtacaaaataaataaaacgaaaagaagaataaaaatgatgaaaactAGTGATTTGAGAAAGAGACGATTAGAGATGTTGGAAGCTTGTGGAGGTCTTATAAGTAATAGAAAATCGAAGTATAATATTCCGGGTACAAAAGAAAATGCTACTTTGATGGATGCTATTAGCGATATTGTAACTGGTGTTAGAGCTTTTTCAAATGCTgtaaaacattacaaaatatcTTTCTATACTTTACAAAGAtatctgaaaaaatataaagaaaaaatgtcaaataaaaagaGTGGCTTAGTATTacataaaaaaggaaatttaaatttaaataaagctgCAATTGACAATAATCAACAAAATACAGATGTTATAAATAAGAAATCTCTTTCGTTGATTTCCTCTAATTCAATTTCATCTTCATCAGATGATGAAAGTAGCTCTGATTCCGAATCAGAAACAAAGTCTAAAaacgataaaattattaaaaaatcgatCGTGAGTAATAATGacacttcaaaaaatatttcaagcaaTTCAAATTCCCAAGAAAGAACTGTATTTGATCCAGTTACAGGACAATATGTTGTTAGGAAGAAGTTTCAAGGAAGAGGTGGTAGAGGGAAAATGCGTCAAACCGTTTATTCAAAACCTGGCactaaggaaaataaaatattaatggaaGCAATTAACGAAATAAGAAACAAAGGAAAAAGTATTGGACACGTTTCTAGAAAGTTTCAGATATCTATACAGACTGTTAGTAAATATAtcgatttatttgaaaaacaaggTGTGTTAGCAAAAACTGGTggattaaaaaaagataaaagcgaaaaaattaaattttcagaaaatatggaatcaaaaaaaacaatattagaaaATCAAGGATCCGAAAAGACtgacaaaaatatacaaatagaaaatagtaaatCTGATACAAATGAAACGTCAttgaatgataataaaaatgatgagaATATTAAAAGTGATTTAAGTCTTCCTATATCAACAAAAACTAACCTGCCCGATGAGAAGTACtctctaaatttaaaatctaattctGATGCTttattaaaaagtgaaaatgaTTCGAATAATTCTGcacaaaattatattgcaaATGATTTAGTTGAAGAAAATGTATCAGAatgtacaaaacaaaatgttttgaaagaaaactcTATTAGTTCCACAAAAAaggaagttgaaaattttaaggaCTCTATTAGAAAACCTACTTATATAACGCAAAAATTAACCACCAGTCAATGTATGGGATCTGATAACGTTAAAAATAGAACGGTTTTAACTGGGCAAACTTCAAAACAAagtgaaaatatacaaaaagataataaattaattaaaagcacAATTGAAATTAGGAAACCAACGTACTTAACACAAAAACTGTCAACACCAATTGTCAAAATATTAGAGACAAAACAAACACCTTCATTAAGTACACAAAGTACAGAAgatgatttaatttcaaaaaattccgAATTAATAGAATCAAGTAAAATTTCTGGAGCAATagaatctaaaatattaaatgacaaTTTAACAGTTGCGTCATCCATTTcccaaatttcaaataaaaattcccCAAATGTATGTCCAAATGTATCTTCAAATGAAACTCTAAAATcagttgaaattgaaaaaccGGAACCACATTTAGTAAAATCCGAAGTTGTTGATAACATTCAAAAATTAGATGAAATCAATAAGAAAAATGataaagaaatggaaaataatgcaaataaaattaaaattggcgaatCTATGAAAATGGACAAGGATAGTTTGcagaagaaaaattcaaatattaaatttcgaaaaCCAACTTATATAACTCAAAAATCAATTCCATTGAATAcatctaataaaaacaaatcagaagatattccaaaacaacaaacaatttataaatcatcagaacaaattaaacaaatttatccTTCCATAACAACACAATCATCAAATTTATGTGACCAAAAAACTGatacaattaaattgaataaaattaatttagatagaCAAACACCAGGtacatcgtcatcatcatcatcatcggtAATTAAATCGCGGGACATTATTATACGTACAACAACAGAATTACGCGATCAAACAATTACAGAATTTTTAAATGCTAAACcgaatgaaattgaaattcaacCAGAAATGTATGAAGATGATTTAATAATTGAGCATGCAATGCGTAGTCTTTTGGAACAAGATGCCGAATTAGATTTAGGAAATGTGGAATCTTTAGCTAACAAAACGGAAATAAAGAAATCATCTTATACTACTGGTAATAGCAGTAACAGTAACAGTAATGATAGTAATACTAGTACTAGTACCGGTAGCAGTAGTAACTGTAGTATTGATTTAGGAACAAGCACAAAATCTTTAACCActgcatataaaatattaaatgaatgtGAAGATTGTGATGATAATGTTGatcaatatgaaaatacatcaaattttcagtctggttaa
Protein Sequence
MGRTHYYDNEKKTNRYPIENIVSVATFSLAVCSTPIEKNEPNIRRTRSYSYENSEIGKTKRVTESTSHKQSQSVQDGFNNPLSTFSIKESPKYAVKSTTPIIITKSSGIYSASNKYTGSTIPHGISKISSGPVIKASATIAEISNIETSEEININAAPEQIPGSCPYCPVKFQKMKYLNFHLQKYHPEKMHENEMEILESGNCYKCEFCKMIFRRLDFYKKHMRKHPRNRYKSVYDGISLTLKKEKLQDDKDIKNMAILKNEYLVQHEFKKELEKQDSNSINPELFLSDSNIEDINFKKNLESKKPQKSKNKSKKKLKCQYCGKTVLKLYHLILHERKHKAGSSVKCRVCEQRYYIRSTYENHMNRHHPEVEYELTEDEIKQLSWRKNLVSTEKLQKPDHVIQHQMEKTETPIVKSKSCSFCPKIFKTVEYRVLHEKAHTGTGNFTCKYCEQKFNSIGTLWSHQRNCFKKLEDENIEVRETRLRSEKREKEKLDDDKKGTEFSQLPTESIKLEREKFSLKSHFKCTYCKKLFTRKSNWVDHVRKHTGEKFECNICDYKTTSPFYLKSHMLKIHDYSKANKSITKEKESGNAANLNTAIEVATKTSLLKSKLLLQSLAKFDSITSEEKAESFIRLKLFKCKFCQEVYTKKYDLEEHLKTHLKILKCQSCEKVFRRLKNLRTHENLMHNENDINLDKENEVAKSVHMNDKLSYENCQKSNELEKILPESNQIVDNIKEKATIEDKSITFEQMENPNDPNWKVKEQCKICRENFDNNYLTTHMKIHKIDKNRQKCDFCDRTFKFKSNLIRHTLADHNTTKFPSPNATSTPTNKSKKITIRTLLKENKIPTINGPPFECPHESCSKSFGRRTGFNKHYLLHLDTFKCKYCNRCFQTKKVLQKHINFHIENLPYKCKTCSKAFPVKHALIWHKRRNNCGNPLAEESSISYDCEKCSKSFISKSSLSQHLLEDSCVFVNKDSSIPVITGSKLQEPPSLNDDTKISEMKPKCDSCGKIFLSPAYLAMHYKKTNCVSQISIHNDVDLKDNIESDVRSNDSSNSSWIHTQIGDSKYICKICSKKFKSKLMLSWHTRRRTCKVSSESYESKDEEDNNKNENSPTKDIANSANMEQTKIIPEDENQNTTLQTDENIDNKKEQYQCEVCLRIFVVKGFLLRHMKYYHPPLIEKDCVKEMKENNNTTNDIENTKTENVSTEITTDIEENYNRRSTRKRIENEDIKFQCQICLKKFETKGLLAGHTRTKACFKSSSCMSTLRAQKSPTKDGNDSLHKCNLCNKIFTTDGHLTNHMRNQVCIIKKENQNITLDNSNNVQSNNDENSTEVNNTITEENKEKCTTDSNENKIESVLEGSNTVIDSYVEKYYTCKKCNKQFPTKVSLAWHTRRKECFYKRKKFKVKTAFGLNPQATKIRKKFIEGIVSSRKVSAERLILQKKIRKAAIQVYKHNKTVTEMANKYHISKTIIYRKLHAFKSLNESTADCNIENLVNSDPAEIKEKVEDNEPDPEIFINEQNKIEDHNKTKPKIDLGVLRNEKDKNMVRAIRNYIRDRKKGTKLPQRFYCDRYQIRKIHFYRKLFKLGMVRKKGKPKRDPENNSSENLKLHINNDKVENESQSIVNKTSCSSLESDLSHIHELGEHKRRKGRKPNSPEELVRKAVMDYRMGKGTQLEMCEKYQVGIWSFHRVKKIVQDEMPDLKFPTAENDEIIESKTMENIDSTSILEDNSSQSATKKSVTNLQLYKINKTKRRIKMMKTSDLRKRRLEMLEACGGLISNRKSKYNIPGTKENATLMDAISDIVTGVRAFSNAVKHYKISFYTLQRYLKKYKEKMSNKKSGLVLHKKGNLNLNKAAIDNNQQNTDVINKKSLSLISSNSISSSSDDESSSDSESETKSKNDKIIKKSIVSNNDTSKNISSNSNSQERTVFDPVTGQYVVRKKFQGRGGRGKMRQTVYSKPGTKENKILMEAINEIRNKGKSIGHVSRKFQISIQTVSKYIDLFEKQGVLAKTGGLKKDKSEKIKFSENMESKKTILENQGSEKTDKNIQIENSKSDTNETSLNDNKNDENIKSDLSLPISTKTNLPDEKYSLNLKSNSDALLKSENDSNNSAQNYIANDLVEENVSECTKQNVLKENSISSTKKEVENFKDSIRKPTYITQKLTTSQCMGSDNVKNRTVLTGQTSKQSENIQKDNKLIKSTIEIRKPTYLTQKLSTPIVKILETKQTPSLSTQSTEDDLISKNSELIESSKISGAIESKILNDNLTVASSISQISNKNSPNVCPNVSSNETLKSVEIEKPEPHLVKSEVVDNIQKLDEINKKNDKEMENNANKIKIGESMKMDKDSLQKKNSNIKFRKPTYITQKSIPLNTSNKNKSEDIPKQQTIYKSSEQIKQIYPSITTQSSNLCDQKTDTIKLNKINLDRQTPGTSSSSSSSVIKSRDIIIRTTTELRDQTITEFLNAKPNEIEIQPEMYEDDLIIEHAMRSLLEQDAELDLGNVESLANKTEIKKSSYTTGNSSNSNSNDSNTSTSTGSSSNCSIDLGTSTKSLTTAYKILNECEDCDDNVDQYENTSNFQSG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-