Aleu007874.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Argyra leucocephala
Gene Symbol
-
Assembly
GCA_963942445.1
Location
OZ012678.1:6826178-6841568[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 3.4e-05 0.0048 18.4 1.1 1 23 117 140 117 140 0.95
2 25 0.02 2.8 9.7 2.1 3 23 147 168 146 168 0.93
3 25 0.00036 0.051 15.2 5.2 2 23 178 200 177 200 0.95
4 25 1.4e-07 2e-05 25.9 0.7 1 23 360 382 360 382 0.98
5 25 5e-06 0.00071 21.0 1.8 1 23 389 412 389 412 0.94
6 25 3.2e-06 0.00045 21.6 1.3 1 21 418 438 418 439 0.95
7 25 0.0092 1.3 10.7 0.5 1 23 453 476 453 476 0.95
8 25 0.93 1.3e+02 4.4 3.0 1 23 482 504 482 504 0.93
9 25 0.00024 0.035 15.7 0.5 1 23 512 534 512 534 0.96
10 25 0.0008 0.11 14.1 1.3 1 23 540 562 540 562 0.98
11 25 1.3e-06 0.00019 22.8 2.0 1 23 568 590 568 590 0.98
12 25 2.8e-06 0.00039 21.8 2.0 1 23 596 618 596 618 0.99
13 25 0.00059 0.083 14.5 0.5 1 23 623 646 623 646 0.96
14 25 7.8e-05 0.011 17.2 0.5 1 23 753 775 753 775 0.96
15 25 0.00057 0.081 14.5 0.3 1 23 781 803 781 803 0.98
16 25 4.7e-06 0.00066 21.1 2.0 1 23 809 831 809 831 0.98
17 25 0.00018 0.025 16.1 3.5 1 23 837 859 837 859 0.99
18 25 0.027 3.9 9.2 1.1 1 23 949 972 949 972 0.96
19 25 0.41 58 5.5 7.9 1 23 1072 1095 1072 1095 0.94
20 25 0.00039 0.055 15.1 0.8 1 23 1149 1172 1149 1172 0.96
21 25 0.00017 0.024 16.2 1.3 1 23 1234 1257 1234 1257 0.96
22 25 8.7e-05 0.012 17.1 4.9 1 23 1409 1431 1409 1431 0.98
23 25 0.0004 0.057 15.0 0.4 1 23 1435 1458 1435 1458 0.92
24 25 2.7e-06 0.00039 21.8 3.4 1 23 1631 1653 1631 1653 0.98
25 25 9.3e-05 0.013 17.0 0.3 1 23 1659 1682 1659 1682 0.96

Sequence Information

Coding Sequence
atgtttaacatATTTAAGCCAAAACTTCCtccaaattttgaattattagaaCTAGAAACTGTATGTCGAATATGTTTGCACACGGGAAACAATTTATTACCATTGtttgtaaatgaaattgattttcTAATATCAGAATTTTTGCCACAAAAGatTTTACGGGAACCTTTACAACCTCATCAAATATGCGGCAAATGTTTTGAAGAAGCCAAGATtgcttatatatttaaaaaacaatgtgAATATTCCGATGAACTAATTAAATCAATACTCAATGAACcatcaaaaaacaacaatacaaTCAAAAGTTTAGAAAAACAAACCCAAACTGATATTAATAACTATGTATATCCATGTGAGAAATGCGAAAAAACATTTGATtcctttgaaaatttaagaaaacatcGTTTAAATGAGCATTTTAAGACACAAAACAATTGTCGAAAAtgtggtaaaatttttaaaaaaatttgtgctCTAAGAAATCACTTGGGATCTGTTCATCCGGAACTTGgttttacaaataataacaagtgtcatttatgtaacaaaaattttaatagaaaatatcatttggatagacatttaattaatatacattctGTAAATGAGAAATTAAAGATAAagagtaaaaatgtaaaaataaataaagtgtcTGAAGTAGAAGAACATACATTTGATGAAATTGGTCAATATGATTTTTCTTGTGGCAATTGTTTTGATTCTTTAAACAGTGAAGATGATGTTAAAAgtcaaaaatgttcaaaaaatttcATTTTAGAAGCCGATTCAACTAATAAATTTCTTGAACTTACGGTAGATATTGATAAAGTTaaggaaaatttgaattctcctGGAAATGATATAGAACGTAATCCACTTTTCGAAGATAACTCAAAAACAGATGGAGAAAATGATGAAGAATCTTTCAAAACAAATCCAGAAATACaagtgaaaaatgaaaataaactaattttaggGGAATTTAAGGCTACGCAAGAAATACTGAAATCTATGATAAGagaatcaaaaaagaaaattcccAAAGTGAAAGTTAAACCCAATGCGGATGGAAACTACGTTTGTGAAATATGTCAAAAAGTTTTTACTAGAGCAGCCCATTTAACTCGTCATCAATTAATACATTCTGGTGATCCAAAACCATATGCTTGCACTATGTGTTCTAAATCATTTTCAAGGCCAgatcatttaaaaaatcatgTTAATGGTTTTCATGCTGATTTAAgattatataaatgtttaacATGTGAAAAATCTTTTACACGAAATGAACATCTTAAACgtcatatattaatttgttcaactgGAATAAAAAGAcgtagaaaagaaaaacttttttcatgTGAAATATGTTTGAGAAAATTTTCTAGTGAAAAATATGTACAAGATCATATAGATGTTAAACATAATGAAACAGGAGAATTTGCTTGTAAATATTGTGGAGAGAAAATTATTGGTTCAactgaatataaaaaacattgtaaGAAACATTATAATGCCACTTCAAAACAGTTTCTTTGTTCAGAATGTGGTGGCAGTTTTACAAAATTGCAATATCTTATGATTCATATAAGAAGACATACCGGTGAAAAACCATACAAATGTCGATATTGTGATAAAGCTTTCCCACGAACAACAGATCAATATGCACATGAAAGATCGCACACTGGAGAGAAAAATTTTCACTGTACAAATTGTCCAAAAGCATTTTCAACAGCGTATAAATTACGTGTCCATATGCGAATACACACAGGAGAGagaCCCTATAAATGTTTGTATTGTCCTAAAGCATTCGCACAAAATAATGATCTTAAAGCCCATCATAGACGTCATACTGGTGAACgattttattgcaatatttgtGATGTTGGTTTTGTACAAATGTATTTATTAAGGCAACATAAACGTCAAGCTCATGGTATTGATGAACCTCGTGGTAGAACTTCCTTGTTGGACAAGGTACAAGTTATATCGGAAGATCAATCTGTAGTTAGGAATTTGATAATGgatgataaaatttcaaatattactgTACAGATGGAGCAAACTGTAACGAATGTAAATcatgatattaaaaatgaaataattgtttgtgggAAATGTGTTCAAGATCATATAGCAGTCCAACATAATGAAACTAAAGAATTTTCATGTAAGCATTGTGCAGAAAAAATTATAGGCGCCACTGAGTTTAAAAAACATTGCAAAGATCGACACAATACAGATTCTAAGCAGTTTCTTTGTTCAGAATGTGGTGGCAGTTTTACAAAATTGCAGGACTTGAAAATTCATATCAGAAGACATACAGGTGAAAAACCATATAAATGTCGATATTGTGAAAAGGCTTTTCCAAGAGCAGCAGACCAATATGCTCATGAAAGatCACATACtggtgaaaaaaattttcattgtacaAGTTGTCCGAAAGCATTTTCAACAGCATATAAATTACGAGTGCATATGCGAATTCATACAGGCGAAcgACCTTATAAATGTTCATATTGTCTTAAAGCATTTGGGAAGAACAATGACTTAAAAGCACATCATAGGCGTCACACTGGTGAACGGTTTTACTGTAATCTTTGTGATgTTGATCTACAAGATAATTTCCCCCATCAAATTTGTATTAAGTGTGCAGAAGATGTTAAAATAGCGTACGCTTTTAAAAAACAGGCGGAATATTCTCatgaagttattaaaaaaatgttagatgGCAAAAGATTACCCCGTTcatctaataaaaaatcatatgaaGAAATCAATGAAGATAATATTTTTCGAACAAAAAGTTTGCCTACGGATACACTTAATGGTGGGACAAGTTTTATATGTCACATTTGTGAAAGACGTCTAACACGAAGAgtcattttacaaaaacatttgGAAAGAgtgcataaattttataattttgaagaacGTTATAGTCATCTGTTCGACAATAATACTCCAAATAAAAGTAGCACTAATTATAATAAAGGATTTACCGAAGAAAGTTATGTAGAAGAAATGACTTTTCCAATTCTTCCTCAAGTTATAATGGTGGATGATGACAATGACATGCAaggtgatgataatgatgatgattattcgATGGAAGAAAAAGATGATCCATTCAAAACTCACGCTGAAGATATAGCTAACAGTAATtctgataaattaaaaagtagtaCACCCTATCAGCAGCAACATCCATTTGATTGTCATATATGTCATAAGCGTTTAACAAGACGATATTATCTCAAATGCCATTTGGAAAGAGTGCATCAATTCTACGATATTGATGCTATTAAACCAAAATTGATAccaatgaaaaattcaaaattaaatgagtCACTTGAGAAATTCAAATCTTCAATAGCTGCATCATCATCACACATAAAACCAAAACATGATGATAGAAATGATGACAGCAATATAGGTCATTTTGAATGCCGTATTTGCAGAAAAGTTTTAACACGACGTTatggtttaaaaaaacattatgaaaTAGTTCACAATATTATTGACAATGATAATAAACCTATTGATTTAACTTATGATGGGTCAAGTGATGAACATGAAGCTTTTGTACCACTACCAGTACTACCACGCTTAGAAACACCCAAGATtaagttagaaaaaaataagtcagAGAGCATTccaaatatgaataaaaatcaaCCGAAAAATGTCAATGTGTATATTTGCCATATATGCGAAAAAGAGTTTTCTGGTCGGGCAACAATGAGAAGACATTTGAAAAATGTAcacaaatttaaagattttgaaaataatatttggttATCCAAAGTCTATCAAAAAAATCCTGAAATACAATTACCATTATATACGACACCTGCAACTGTTCATGATGACAACGAATTTGATCAgAGTTATAAacatgatgatgatattgacaTGCATGCATACTTGCTTTGTCCAGAAGTAGTATTAACAACCGGCGACGATAACCATCCTGGAATTGGAAATGTCAAACATGGTGCAGGTGGTGGTGGTGGAAGTTCTTTAAATGCTGGCTCTACTAGTGGCGGAGGGAATCATTTCAATCCTAATAGATTCAGAAACGACTTAAAAGTTAAACATGCaaaggacaaaaaaataaagaataaagtcgaaccacttaaattaaaattaggtgtgctttcagttaaaaatattagtccaccaaaacagaaaaaaccaccaaaaattcgtaaaaatattttttcgtgcAAACACTGTCAGAAACCATTTGATCGTGTAGATCATTTGAGACGTCATGAATTAACACACACTAAACCATTTAATTGCCAATTTTGTGGTAAAGGTTTCTATCGTAAAGATCTTCTAGGCAGACATGAAAATGCAGCACATTCGAAATTAATACAACAACAGCAAGTACAGTTGCAACCAAATGATCAAAATTCAGGATTTTATTCTGTGGGCAATTCTAATAATGATCACAAATCAAATCCACCAaattttgataatgaaaattcgtttgaagataatgaaaattcaatggaaaataatgaaaatgaacattataatgatgaagatgatgttgatgataatgatggtaatgatgatgatgatgacgatgatgatggtGGTGATGATAATCatcatgaaaattttgaagatgaacaaaatttaaatgaaggtAGTAATTCCGCAGATATTCATAAAGAGGATTCTAATGAAGATAGTGTtgaaaaagatgaaaataattcaaatgcagacacggaagaaaataatattaaagacgCTCAAGAagaaaattctaattcaaataAGATTATAATGGAAACTAATGAACCGGCATCAACATCGacagaaattgtaaacaaaaaaaaatttaaagaatcaTCGAGAAGAGTTGCTGGTACATATAAATGTGAAACTTGTGGACGAAAATTCAATCGTCGAGATCATTTACGAAGACATGAGTTAATTCATAATGGTTTAAGaccatatatttgtaatatatgttCGAATACATTTCGAAGAGTAGATTCTTTACAAAAGCATGTTAGGGCTATACATTCGTATAAGGATTAA
Protein Sequence
MFNIFKPKLPPNFELLELETVCRICLHTGNNLLPLFVNEIDFLISEFLPQKILREPLQPHQICGKCFEEAKIAYIFKKQCEYSDELIKSILNEPSKNNNTIKSLEKQTQTDINNYVYPCEKCEKTFDSFENLRKHRLNEHFKTQNNCRKCGKIFKKICALRNHLGSVHPELGFTNNNKCHLCNKNFNRKYHLDRHLINIHSVNEKLKIKSKNVKINKVSEVEEHTFDEIGQYDFSCGNCFDSLNSEDDVKSQKCSKNFILEADSTNKFLELTVDIDKVKENLNSPGNDIERNPLFEDNSKTDGENDEESFKTNPEIQVKNENKLILGEFKATQEILKSMIRESKKKIPKVKVKPNADGNYVCEICQKVFTRAAHLTRHQLIHSGDPKPYACTMCSKSFSRPDHLKNHVNGFHADLRLYKCLTCEKSFTRNEHLKRHILICSTGIKRRRKEKLFSCEICLRKFSSEKYVQDHIDVKHNETGEFACKYCGEKIIGSTEYKKHCKKHYNATSKQFLCSECGGSFTKLQYLMIHIRRHTGEKPYKCRYCDKAFPRTTDQYAHERSHTGEKNFHCTNCPKAFSTAYKLRVHMRIHTGERPYKCLYCPKAFAQNNDLKAHHRRHTGERFYCNICDVGFVQMYLLRQHKRQAHGIDEPRGRTSLLDKVQVISEDQSVVRNLIMDDKISNITVQMEQTVTNVNHDIKNEIIVCGKCVQDHIAVQHNETKEFSCKHCAEKIIGATEFKKHCKDRHNTDSKQFLCSECGGSFTKLQDLKIHIRRHTGEKPYKCRYCEKAFPRAADQYAHERSHTGEKNFHCTSCPKAFSTAYKLRVHMRIHTGERPYKCSYCLKAFGKNNDLKAHHRRHTGERFYCNLCDVDLQDNFPHQICIKCAEDVKIAYAFKKQAEYSHEVIKKMLDGKRLPRSSNKKSYEEINEDNIFRTKSLPTDTLNGGTSFICHICERRLTRRVILQKHLERVHKFYNFEERYSHLFDNNTPNKSSTNYNKGFTEESYVEEMTFPILPQVIMVDDDNDMQGDDNDDDYSMEEKDDPFKTHAEDIANSNSDKLKSSTPYQQQHPFDCHICHKRLTRRYYLKCHLERVHQFYDIDAIKPKLIPMKNSKLNESLEKFKSSIAASSSHIKPKHDDRNDDSNIGHFECRICRKVLTRRYGLKKHYEIVHNIIDNDNKPIDLTYDGSSDEHEAFVPLPVLPRLETPKIKLEKNKSESIPNMNKNQPKNVNVYICHICEKEFSGRATMRRHLKNVHKFKDFENNIWLSKVYQKNPEIQLPLYTTPATVHDDNEFDQSYKHDDDIDMHAYLLCPEVVLTTGDDNHPGIGNVKHGAGGGGGSSLNAGSTSGGGNHFNPNRFRNDLKVKHAKDKKIKNKVEPLKLKLGVLSVKNISPPKQKKPPKIRKNIFSCKHCQKPFDRVDHLRRHELTHTKPFNCQFCGKGFYRKDLLGRHENAAHSKLIQQQQVQLQPNDQNSGFYSVGNSNNDHKSNPPNFDNENSFEDNENSMENNENEHYNDEDDVDDNDGNDDDDDDDDGGDDNHHENFEDEQNLNEGSNSADIHKEDSNEDSVEKDENNSNADTEENNIKDAQEENSNSNKIIMETNEPASTSTEIVNKKKFKESSRRVAGTYKCETCGRKFNRRDHLRRHELIHNGLRPYICNICSNTFRRVDSLQKHVRAIHSYKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-