Aleu017825.3


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Argyra leucocephala
Gene Symbol
-
Assembly
GCA_963942445.1
Location
OZ012679.1:81960398-81965113[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 38 4.6e-05 0.0065 18.0 4.4 2 23 463 484 462 484 0.97
2 38 7e-06 0.00099 20.5 1.6 3 23 492 512 490 512 0.98
3 38 6.7e-05 0.0095 17.4 1.5 1 23 518 540 518 540 0.98
4 38 2.2e-07 3.2e-05 25.2 1.1 2 23 583 604 582 604 0.97
5 38 0.0052 0.73 11.5 0.7 3 23 612 632 610 632 0.98
6 38 2.4e-05 0.0034 18.8 0.6 1 23 638 660 638 660 0.99
7 38 0.00016 0.022 16.3 3.3 2 23 674 695 673 695 0.98
8 38 0.00022 0.031 15.8 6.0 1 23 701 723 701 723 0.98
9 38 9.6e-06 0.0014 20.1 3.8 1 23 729 751 729 751 0.98
10 38 0.0011 0.15 13.7 0.4 1 23 756 778 756 778 0.99
11 38 2.1e-06 0.0003 22.2 0.4 1 23 784 806 784 806 0.99
12 38 0.00078 0.11 14.1 0.8 1 23 812 835 812 835 0.97
13 38 7.7e-05 0.011 17.3 2.4 1 23 841 863 841 863 0.99
14 38 2.7e-06 0.00038 21.9 0.4 1 23 869 891 869 891 0.99
15 38 8.2e-06 0.0012 20.3 0.1 1 23 897 920 897 920 0.98
16 38 3.7e-05 0.0052 18.3 8.2 1 23 926 948 926 948 0.99
17 38 0.00022 0.032 15.8 2.5 1 23 954 976 954 976 0.97
18 38 0.00084 0.12 14.0 0.6 2 23 982 1003 981 1003 0.96
19 38 8.7e-05 0.012 17.1 0.0 1 23 1008 1030 1008 1030 0.98
20 38 1.8e-05 0.0026 19.2 0.2 1 23 1036 1059 1036 1059 0.97
21 38 5e-07 7.1e-05 24.1 2.1 1 23 1065 1087 1065 1087 0.99
22 38 0.0012 0.17 13.5 1.0 1 23 1093 1115 1093 1115 0.99
23 38 8.6e-05 0.012 17.1 2.3 1 23 1120 1142 1120 1142 0.98
24 38 0.00013 0.019 16.5 0.9 2 23 1149 1170 1148 1170 0.97
25 38 8.7e-05 0.012 17.1 0.6 1 23 1176 1199 1176 1199 0.98
26 38 9.3e-06 0.0013 20.2 5.2 1 23 1205 1227 1205 1227 0.99
27 38 1.2e-05 0.0016 19.8 3.4 1 23 1233 1255 1233 1255 0.98
28 38 0.017 2.4 9.9 2.8 1 23 1260 1282 1260 1282 0.98
29 38 1.4e-05 0.002 19.6 0.0 1 23 1288 1310 1288 1310 0.98
30 38 0.0011 0.16 13.6 0.2 1 23 1316 1340 1316 1340 0.97
31 38 1.9e-05 0.0028 19.1 4.5 1 23 1346 1368 1346 1368 0.99
32 38 6.4e-05 0.0091 17.5 7.5 1 23 1374 1396 1374 1396 0.99
33 38 0.00038 0.053 15.1 0.8 1 23 1402 1424 1402 1424 0.98
34 38 0.0017 0.24 13.0 1.7 1 23 1430 1453 1430 1453 0.96
35 38 0.14 21 7.0 4.7 2 23 1460 1481 1459 1481 0.97
36 38 0.0001 0.015 16.9 0.5 1 23 1487 1510 1487 1510 0.98
37 38 5.5e-07 7.9e-05 24.0 1.6 1 23 1516 1538 1516 1538 0.99
38 38 0.00064 0.091 14.4 3.6 1 23 1544 1566 1544 1566 0.99

Sequence Information

Coding Sequence
atgCATTTATATATTCTTAAAGGGAGATATCCGAAAACGAAAATAACACCTAAAAGATCAACCTTgtcaatattagaaaatttttcaaaaccacCTCCAACCCCTCGGGAGTTAAACATTAATTATGAGCATTCAGGAGATGAATATTTGCCTCTTCAGCATGAATTACCAGTAGCAATTCGGAAAATTGGTGCACCATGGAATTCCCATTTAATGCATAATAGTTCATCAAACATAATTGGACGAAATCAAAATAATCAGTGGATACATTCTGCTCAATCGTCTCAAAATGATGCCAACaatcataatttttctaaaaataacagaaatttaaGTTCATGGGGAACGTCTGCACAAGATTATCAGAACACTAACCAGTGGATTGCACAAATTTCCACTCCTCAACAATATCCAATGCACCCGCCACCTATACCACCACCTAGAACAGACAATCGAAGTACGTGGGCTGCTCAACTTGCACATGAACAATTTTCACCACTTTCTCAATCCGCTTTACGACCTCACCATCATACTCAAACAACTTCTCCTTTACATTCTTCCCAAGCTACATGTTcttcaatatcaaattttaccTGCAGCTCTCCCCCGTCTAAATCCTCGAATTCGACACATtcttcaaaaacattttcacaTGCCATTAACTCTTCAGAAAGCTCAAATATCGAAaatcaagataaaaaaattttacctgTTACTAATTCAAAAGTTGAAACGAATAGTATTTGGATTCCACCAGCagtaaaaagtaataataatgaaattgaaccAAAAAGTGATTCAAGGCATGTAACTTCTCAACCAATTAGCGAAGAAACAGTTATTCCTAACATTCTTGAAAATCAGCAACCTTCAAACCTcgataatttatatgaaaaagaaGCCGATGAtcaaaaaactacaaaacacaATGAAAACTTATTAATTAAGAAAGAAATATTCGaagaaaataattcgaaaacagaaatttatttagaaaataatatatttcctTCATCAAAAGACactttttttgaagaaaatataacTCAAGTATATAACCCTGAAAATGATATGTCATTAATGTTATCTAAAAAAATTGCtgctgaaaatgaaaaaaaaatatacgacGATCAGAGtaaagaaattgaattattaaaaacaaaaaaagctatTTCTTTCATTTATATTCCGAAACCGGAAGAAATTCATAAAATAGCCTTTCCAGATCGAAATGAGGACCCTAAACTACTAATTGAGCCTGTCGTAAGAATTGAAGAAATTTCAAAGGATATTTTAGATGAATATTTACCGAAATATACTTTAGCAAAAAACTTTTTACAGGATTTAGTTTGTTATAAAAagggtaaaaaatttaaatttcggaAGCAGTGTAAATTGTGCCATAAAAAATTCTCCACTCCGACTTATCTTCGTATTCATTTAAGACAACACACTGGTGAAAAACCTTTTGGTTGTAATTTCTGTGGAAAATTTTTTGCGGATAAAAGCTCGTTAACTACTCATACAAGAAGTCATACTGGTGAAAAGCCTTACAAGTGTAATCAATGTGATATGAGTTTCGCATACACAACTAGCTTAAAATGGCATTTAAGTAGACATGATGACCCAGATGCAAAATTTCGAGCAAGACCCTTGTCTAAGGGACTAGAtagtgaatattttattatatatgataaGTCGAATGCTATAGATCCAAAAGAAATGTCCGAAATGCTAAAAACGAAAACTTGTAAAATTTGTGGTAAAAGTTTTTCATCATcaggatatttaaaaatacatttacgATCTCACACTGGTGAAAAGCCATATGGATGCAAaacatgtaataaattttttgctgATATAAACGTTTTGCGAATGCATTTGCGTAGTCACACTGGAGAAAAACCTTACAAATGTGACGCATGTGATATTAGTTTTGCATATTCAAGTAGCTTAAAAGACCACTTAAAAAAACATGAGGatcctaattttaaaatagaagaGTTTACACAAAAGCAATGTCAATATTGTTATAGAAATTTTACAAGTTCGCGATATTTAAGAATACATTTAAGAAAACATACTGGCGAGAAACCACACCGATGCAAACTTTGCGGAAAGCACTTCATGtatgcaaaaaatttacaaactcATTTAAAAAGTCACACTGGAGAAAAGCCGCACAAATGTGATCAATGTGGAATGAGTTTTACACACTTAGTATCACTAAAATCACATATAAGAATGCACAATGGTATTGGCTTTAAATGTGATGTTTGTAGCTTGCTATTTCCGACGCGTTCAAAAGCAAGAATTCATATGCGCGTTCACATTGGAATTAAACCATACAAATGCAAAATATGTGGAAAAGGTATTACTACTGCTAGCAGTTTAAGTTATCATATGCGAATTCACACAGGGGAAAAACCTTTCAAATGTGAAGAATGTAATGTTTCATATAAATCAACTGGACAGCTTATCTTACATAATCGAATGAAACATACTGGTGAGAAACCTTATAAGTGCAGTTATTGTGAAAAAGCATTTTTTCAATCATCATCGATGAAATACCATGAAAGAATTCATACGGGTGTGAAAccttataaatgtaaaatttgtgaaataagtACCACAACTTCAGGAAGTCTACGAGTACATATGAGAATTCATACGGGGGAAAAGCCATATGTATGCAATGAATGTGGTGCTGCCTACACTAATTCTGGCCAATTACTTGTTCATCGAAGAACGAAACATACAGGAGAAAAACCATTTAAATGTACTCACTGTGATAAGGATTTCCATCATTCATCGTCTTTAAAATCACACATACGAATACATACTGGTGAAAAACTTCACAAATGCAGTAAATGTAATGCAGTTTTTACTCAATTTAGTGCACTTCGTAGTCATGTTAAATTGCATAATGAAATCGCATTAAACTGTGAAATTTGTAACAAACCTTTTGAATCAGTATCTAGATTTCGATATCATATGCAATCTCATAAAAAACGTCGTTACGTATGTCAAGTTTGTAATTACAAAGCAGTGACACCCAGTTCTTTAGCAGTTCATATGAGAATACATACCGGTGAAAAACCATATAATTGTAAAGATTGCCCTATCGCCTTTGCTACTTCGTCCCAACTGTTACTACATACTCGTGTAAAACATACAGGTGAAAAGCCATATCAATGCACACATTGTGATAAAGCATTCTTCTCATCAGCTTCCCTTAAAGTTCATATTCGCATGCATACGGGAGAAAAACCTTACAAATGTGATAAATGTGAAATGAGCTTTGCATATTTAGCCAGTATTAAATCACATCGTAAAATGCACGATGGTTCCGTTTACAATTGCAAATATTGCGAAAAATCATTCCCTTCAATTCGTTATTATAGAATTCACATGAAATCTCACAATGCGGGAAAGTCTCTTAAATGTGAAATTTGTGATCATAAGGTCCGTTCCGCAAGTAATATGGTGATTCATATGCGAAGACATACAGGAGAAAAACCTTTCAAGTGCAACACATGTGAAGCAGCATTTACAACTTCCGGTCAATTAGTTCTACACACAAGAATGAAGCACACTGGAGAACGACCATTTAAATGCACATACTGTGACAAAGCGTTCTATCAATCTGCTTGCTTGAAAAGTCATACTCGAACTCACACTGGCGAAAAGCCATTTAAATGTGATTTGTGCAATCTTTCTTTTAGTCAAAAATCATCTttaaagaatcataaaaaaaaccatGTTAATCCAGATTTCAAATGTCATATATGTTGTAAACCACTTCGTACAGACGAAGCCCTAAAAGCGCATATTCGTCAACATAATGGTGAACCGAAGTATAACTGTGAAATTTGTGGTCAAAAAGCTCCAACTCCAAGTAGTTTAGCAATACATATGCGAACTCATACTGGCGAAAAACCTTACAAATGTCCAGAATGTGAAAATGTTGCATTTGCCACATCAAGTCAATTGACTTTGCATACTCGTGTTAAACATACAGGTGAGAGACCTTATAAATGCAGTCATTGTGATAAGGCTTTCTTCCAATCAACTAGCTTAAAATCCCATGAAAGATCACATACTGGAGAAAAACCTTATAAATGTAAGTATTGTGAAACTTGTTTTAGTCATTCCGGTAGTCTTAAAACGCATCAACTACGGCACACAGGAAAATCACCGCACAAATGTGAAATATGTGGACAATATTTATCTACTGCAAATGCTCTTCTAAGTCATACCAGAACTCATACGGGAGAAAAACCGTTTAAATGTAAAGAATGTGAATTCTCCAGTGCTACGCGATCACAATTATCTGTTCATAAGCGTGAAAAGCATATGAATATAACTCCATTAAAATGTActttttgttcatatgtaacAAAGAATAGGTGCAGTTTTAAAACGCATTTACTGATACATACAAAAAAGAAACCATATCGTTGTGAAGAATGTGATGGACGTTTTAATacatcttcaaaattattaatacataaacGCGTTGAACATACCGGTGAGAGACCTTTTCAATGTACTTATTGTGATAAGGCATTTTACTTATCAGCATCATTAAAATCGCATATGCGAACTCATACTGGTGAAAAACCTTATAAATGTGATCAGTGTGAAATGACATTTGCACATTACAGTAGTTGGAAATATCATATTAAGAAACACGATGCTGttcaagattaa
Protein Sequence
MHLYILKGRYPKTKITPKRSTLSILENFSKPPPTPRELNINYEHSGDEYLPLQHELPVAIRKIGAPWNSHLMHNSSSNIIGRNQNNQWIHSAQSSQNDANNHNFSKNNRNLSSWGTSAQDYQNTNQWIAQISTPQQYPMHPPPIPPPRTDNRSTWAAQLAHEQFSPLSQSALRPHHHTQTTSPLHSSQATCSSISNFTCSSPPSKSSNSTHSSKTFSHAINSSESSNIENQDKKILPVTNSKVETNSIWIPPAVKSNNNEIEPKSDSRHVTSQPISEETVIPNILENQQPSNLDNLYEKEADDQKTTKHNENLLIKKEIFEENNSKTEIYLENNIFPSSKDTFFEENITQVYNPENDMSLMLSKKIAAENEKKIYDDQSKEIELLKTKKAISFIYIPKPEEIHKIAFPDRNEDPKLLIEPVVRIEEISKDILDEYLPKYTLAKNFLQDLVCYKKGKKFKFRKQCKLCHKKFSTPTYLRIHLRQHTGEKPFGCNFCGKFFADKSSLTTHTRSHTGEKPYKCNQCDMSFAYTTSLKWHLSRHDDPDAKFRARPLSKGLDSEYFIIYDKSNAIDPKEMSEMLKTKTCKICGKSFSSSGYLKIHLRSHTGEKPYGCKTCNKFFADINVLRMHLRSHTGEKPYKCDACDISFAYSSSLKDHLKKHEDPNFKIEEFTQKQCQYCYRNFTSSRYLRIHLRKHTGEKPHRCKLCGKHFMYAKNLQTHLKSHTGEKPHKCDQCGMSFTHLVSLKSHIRMHNGIGFKCDVCSLLFPTRSKARIHMRVHIGIKPYKCKICGKGITTASSLSYHMRIHTGEKPFKCEECNVSYKSTGQLILHNRMKHTGEKPYKCSYCEKAFFQSSSMKYHERIHTGVKPYKCKICEISTTTSGSLRVHMRIHTGEKPYVCNECGAAYTNSGQLLVHRRTKHTGEKPFKCTHCDKDFHHSSSLKSHIRIHTGEKLHKCSKCNAVFTQFSALRSHVKLHNEIALNCEICNKPFESVSRFRYHMQSHKKRRYVCQVCNYKAVTPSSLAVHMRIHTGEKPYNCKDCPIAFATSSQLLLHTRVKHTGEKPYQCTHCDKAFFSSASLKVHIRMHTGEKPYKCDKCEMSFAYLASIKSHRKMHDGSVYNCKYCEKSFPSIRYYRIHMKSHNAGKSLKCEICDHKVRSASNMVIHMRRHTGEKPFKCNTCEAAFTTSGQLVLHTRMKHTGERPFKCTYCDKAFYQSACLKSHTRTHTGEKPFKCDLCNLSFSQKSSLKNHKKNHVNPDFKCHICCKPLRTDEALKAHIRQHNGEPKYNCEICGQKAPTPSSLAIHMRTHTGEKPYKCPECENVAFATSSQLTLHTRVKHTGERPYKCSHCDKAFFQSTSLKSHERSHTGEKPYKCKYCETCFSHSGSLKTHQLRHTGKSPHKCEICGQYLSTANALLSHTRTHTGEKPFKCKECEFSSATRSQLSVHKREKHMNITPLKCTFCSYVTKNRCSFKTHLLIHTKKKPYRCEECDGRFNTSSKLLIHKRVEHTGERPFQCTYCDKAFYLSASLKSHMRTHTGEKPYKCDQCEMTFAHYSSWKYHIKKHDAVQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-