Aleu013508.1
Basic Information
- Insect
- Argyra leucocephala
- Gene Symbol
- -
- Assembly
- GCA_963942445.1
- Location
- OZ012678.1:173845788-173846177[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-09 1.9e-06 28.6 0.0 3 40 17 53 15 55 0.90
Sequence Information
- Coding Sequence
- atgcGAAAACAGTACATTAGGAAAACGTCTATAGGCAGTTGGACTGCTGAGGAAATCAAAAAGGCTCTAAATGCATTAAATGGTGGTATACCAATTAGAAAAGTTGCAAGGCTTTACAATATACCCGAATCCACGATTCGCAAAGCTAAAAAGGGGCATTGTTATGACACCACTCCAGCCTTAGGAAGAAGACCCGTATTAAATATGGAGCAAGAAAAAGAGCTATCGAACCATTTGATTACGTTATCCCACAAGTTTTATGGACTCCAACCAATCGAGCTTAGAAAACTTCTATTTGATTACGCAGAATCAAATAAGATTCCACATAATTActcaaaagataaaaaactaGCTGGATCCGATTGGTATCGGGCATTTctgctaaaataa
- Protein Sequence
- MRKQYIRKTSIGSWTAEEIKKALNALNGGIPIRKVARLYNIPESTIRKAKKGHCYDTTPALGRRPVLNMEQEKELSNHLITLSHKFYGLQPIELRKLLFDYAESNKIPHNYSKDKKLAGSDWYRAFLLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00160583; iTF_00160618; iTF_00160584; iTF_00160596; iTF_00160594;
- 90% Identity
- -
- 80% Identity
- -