Aleu012670.1
Basic Information
- Insect
- Argyra leucocephala
- Gene Symbol
- -
- Assembly
- GCA_963942445.1
- Location
- OZ012678.1:143734836-143736026[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6 1.2e+03 0.5 0.0 27 37 243 253 239 258 0.79 2 2 1.2e-10 8.5e-08 32.9 0.0 3 41 281 318 270 320 0.92
Sequence Information
- Coding Sequence
- atgTCTACCAAATTGGTTTATAAAGAACACTTGGATAATCTGTTTGATATGCAGCgaaaatttttacaagaaaatttatatccaGATGTTAAAATTGCTTTTGGTGAAGATAGTTTTCTTCTTGCCCATAAAATTCTGTTATCAATGAATAgtgaagttttcaaaaattgtttaaaaaacttACCAGTAACGTCAGATGCCCTAACTGTTTTAATTATCCCTGAATATGAAGAGAtcaaagattttgaaaatttagataattCTTTTGAAGTAGAAGAACAAAATGATAcaactatacataataatttattaaaggaAAAATCTGAAGTTAGTATAAACAATAGTCAACTAATTATTACAAATGGTACTTCGGTAGACTCAAACGATAAAAATAATGAGAAATGGAATTTAGTGTCTGAAAATTTATCTGATTCAGAATCAGACatgcttgaaataaataacttaccaaatacaaaaactaataaCAAATCACTTGATTGTTATggttatactttaaaaaatccTACATGCTTAGAAGCTGATGAAATCGAAATAAATGAAGTAAATTTAgatagaaaattagaaatatatttagCAGATGAATTAGAAATGCAATCTGAACATGACCAAACTGaggaaaaaaacgaaataaaagaaaatattacttCTGAATTAATAGAACGATTTACAAATGGTGAAAAACTTCAAAGTATAagtaaactattaaatattccATTGTCCACATTACATTGGCATAAGGTACGTTTAATTAAGAGAGGTTTAATACCTGATGGAGTTCTTTCAGTTAGAACCACTCTTAGAACAAatcaaaagcaaagaaataatttagaaaaagcaATTGAAGCTTGCAAAATGGGTATGGCACAAAATAGAGCTGCAATAAAATTTGGTGTTTCCAAAGCAACATTAAATCGACGTATGAAAAAGATAAATGATActtaa
- Protein Sequence
- MSTKLVYKEHLDNLFDMQRKFLQENLYPDVKIAFGEDSFLLAHKILLSMNSEVFKNCLKNLPVTSDALTVLIIPEYEEIKDFENLDNSFEVEEQNDTTIHNNLLKEKSEVSINNSQLIITNGTSVDSNDKNNEKWNLVSENLSDSESDMLEINNLPNTKTNNKSLDCYGYTLKNPTCLEADEIEINEVNLDRKLEIYLADELEMQSEHDQTEEKNEIKENITSELIERFTNGEKLQSISKLLNIPLSTLHWHKVRLIKRGLIPDGVLSVRTTLRTNQKQRNNLEKAIEACKMGMAQNRAAIKFGVSKATLNRRMKKINDT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00160868;
- 90% Identity
- iTF_00160868;
- 80% Identity
- iTF_00160868;