Aleu028149.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Argyra leucocephala
Gene Symbol
bab1
Assembly
GCA_963942445.1
Location
OZ012681.1:40862206-40865189[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-12 1e-09 39.0 0.0 3 45 534 576 532 576 0.92
2 2 1.5 1.1e+03 0.5 0.8 4 20 688 703 687 703 0.91

Sequence Information

Coding Sequence
atgggTAGCAGCGAAGGACAGACGTATTGTCTGCGATGGAATAATCATAAATCGAATTTAGTTGAAATTCTTGATGCCCTCATTAAAATGGAATCATATGTTGATTGTACAATTGTTGTTGAtgaacaaattcaatttaaggcACATCGTGTTGTATTAGCAGCTAATTCACCATATTTTCAATCTATTTTACAAGATGTTCCAATGGATCATTGTAGTATATTATTTCCGGGTGTACAAGCATTTGAAATGCGTGCACTTCTCGAATATATGTATACGGGTGAGGTAAACGTAACACAAAGTCAAATACCAAGAATTATGAAAATAGCTGAACAACTTGAAGTCAAAGGTTTATTTGACATGACTGatttaaaagagaaatttacaaaatttgaagaTAATGGTCCAACAAatcattcatcatcatcatatacaGTTCCTTTTCCACCACcattaccaccaccaccaccaccaccaccacaatCAACTAAATTAACAGGTGTTACACCAACTGCATTTACACCACCTACATTCAGAGAAACATCAAAAGATATCAATAGAGATTTAAATGAAAGAGTTAGTCATCATCAATATTCACATTCTCATTCTCCGCAACCACATCAATCGCATTATCGTtcattatcatcaataaatttAGATCGTAATATTAATGAAAGACGTCTTAGTAGTTCTGAACGACGTATGAGTGGAGATGGTGGACATCGATTGTCATCAGCTTCAGCAATAGCAGCTATAACAGATCtccatcatcaacaacaacaacaacatcaacaacaacaacagtcaTCACCTATcatatcaacatcatcaaatatAACTCAATATCAGGCACAAAGCAGTAGTTCACCACCGccatcttatttatataaatcacCGTATTCTAGTCTATATACAAAAAGTCCAGGTCCATCAGAGAGCAGACGTAGCGCTGAAGATCGCAGTGAACGTTATAGTTCATCAAGTGATAGACACGAAAGACAAGAACGTGGATTACATAATGATCGCAACACAGAAAGACTTCAAGATAGACAAACGgtccaacaacaacaacgacaaatatcaaattcaccaacaccaccaccaccaccaccaccacctgcatcaacacaacaacaacatacAACATGGCCGATCTCATCAGTAATTCCGCCCAGTTCAATTCCAACTTCTGCGGCTGCAGCTGCTATGTTAAGTTCCGTTTATGAAAGTGCATCTGACATGAATCCTCTAAAACGTAAAAAGTTATCATCGATCTCAAGTATGTTAATGGCAAGTGATACAccaattttaagaaatgttttgGCGCAAAGTCATGCAGCTGATTCATCTCACCCGATGCCATTAGTTAAGCAGGAGAGAGAAAACGAAAAACAAACGCCACTTAATTGTTCTGGACCATCAGACTATAATAATGATAAGtatGGAAAGTATGATGAACCACATTCACCATTCATTGATAAGTCATTCGATGATGAAGGACTAGATTGTTCACCAAATGAGCGTCTTGGAAATATTTCGTATTCCTCAAGTAATAACTCGCAAAAACCAGAATGGAAACGTTACAAACAATATACTAGAAGTGATATTTTAGCTGCTATTGAATGTGTTCGTAACGGTATGAGTGCTTTACAAGCATCCCGTAAATTTGGTGTACCATCTCGAACTCTCTatgataaagtaaaaaaattaggaaTCACAACTGGTCGTCCAATGAATCGTACGATGAAACGAAGTCCAAGTACTGGTAGTAGTTCGGCTAGTTTTCCATTTGGTATAAGTGGAACAACACATCCTGCTTACAGTCAAGCAGAGGCAATGCTTTCACAAATGCATGAATCAAATGAATTGCATTCAAGTCATTTACGAAATAGTAGTAATGGTAATGGCAACAATACTGATAAAGAACATCGTAATGAGCATCATTTACCTCCTAATTTACCACATCCAGCAGCTGCTGCATTACTTGATCCGACATTTTTACAACAAGCATTCGAATCACGTGGTGGTGATATAGCTGGACGTGAAGCATTACATGCAATGGCATTAGCAGCTGCAGCTCATGCTGCTGTAAATGGTATTTCAACAAGTCCAGGTACTAATGGAACAGCTAGATCACCAAGTCCAGGATTTGCTCTTAAATATTCTCGATCTCATCAAGACTCTCCACCACCACCttcgacaacaacaacaacaacaacaacaagtttAAATAGAACCTCATCGTCAGTATCATCACAACAACATCAGTCAAATGTTTCTCATCATCAAGATTATGATAGAGATAGAAATAGAGAAATAGATAACAAAATGGATTATGAACATGAATCGAaagatgatggtgatgatgacgatgatgatgatgatgatgatgatgatgatggtgatgaaaGTTCAAGATCACCTGGTCATCATAGAAATCGAATAGATGATAATAATGTATCTGAACGACGAGAACTTGAATTTGTAGAGCGTGGTATTAGAAATAGACTTAGTAGAAAacgtaatttaattaaaattgagcaTGAACAGGATCGTGTTGAAGATTTATCTGTCAATCGAAAAGAAACAATAACAGCAAGACAACAAGAAGTACATTCACCAACACCTCAACCGCTGTCACCACAATCATCTTCTTTACATGCACCACATTCACCTTCATCACTTCAaacaaataatgataataatcatCAGCGTAATCAAAATCCATCATATAATAGTGGCAGCAATCAACAATCATCTGGCGGTGTAATAATGCCaccaattattacaaaattatctgGACATAATATTAACGAATCAACCGAATATCCAGTTAGTCTTGAATCATCGAcaactttatcaaatataaaaagagAATTATCAAATTCGGATGAAATAAGAGACTAG
Protein Sequence
MGSSEGQTYCLRWNNHKSNLVEILDALIKMESYVDCTIVVDEQIQFKAHRVVLAANSPYFQSILQDVPMDHCSILFPGVQAFEMRALLEYMYTGEVNVTQSQIPRIMKIAEQLEVKGLFDMTDLKEKFTKFEDNGPTNHSSSSYTVPFPPPLPPPPPPPPQSTKLTGVTPTAFTPPTFRETSKDINRDLNERVSHHQYSHSHSPQPHQSHYRSLSSINLDRNINERRLSSSERRMSGDGGHRLSSASAIAAITDLHHQQQQQHQQQQQSSPIISTSSNITQYQAQSSSSPPPSYLYKSPYSSLYTKSPGPSESRRSAEDRSERYSSSSDRHERQERGLHNDRNTERLQDRQTVQQQQRQISNSPTPPPPPPPPASTQQQHTTWPISSVIPPSSIPTSAAAAAMLSSVYESASDMNPLKRKKLSSISSMLMASDTPILRNVLAQSHAADSSHPMPLVKQERENEKQTPLNCSGPSDYNNDKYGKYDEPHSPFIDKSFDDEGLDCSPNERLGNISYSSSNNSQKPEWKRYKQYTRSDILAAIECVRNGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRTMKRSPSTGSSSASFPFGISGTTHPAYSQAEAMLSQMHESNELHSSHLRNSSNGNGNNTDKEHRNEHHLPPNLPHPAAAALLDPTFLQQAFESRGGDIAGREALHAMALAAAAHAAVNGISTSPGTNGTARSPSPGFALKYSRSHQDSPPPPSTTTTTTTTSLNRTSSSVSSQQHQSNVSHHQDYDRDRNREIDNKMDYEHESKDDGDDDDDDDDDDDDDGDESSRSPGHHRNRIDDNNVSERRELEFVERGIRNRLSRKRNLIKIEHEQDRVEDLSVNRKETITARQQEVHSPTPQPLSPQSSSLHAPHSPSSLQTNNDNNHQRNQNPSYNSGSNQQSSGGVIMPPIITKLSGHNINESTEYPVSLESSTTLSNIKRELSNSDEIRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00160839;
90% Identity
iTF_00160839;
80% Identity
iTF_00160839;