Aleu010350.1
Basic Information
- Insect
- Argyra leucocephala
- Gene Symbol
- ttk
- Assembly
- GCA_963942445.1
- Location
- OZ012678.1:84843469-84845730[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.9 7.2e+03 -2.1 0.2 10 20 349 358 348 358 0.83 2 2 3.2e-17 2.4e-14 53.9 0.0 2 41 597 637 596 641 0.94
Sequence Information
- Coding Sequence
- atgtcggTTCAACAGTTTTGTTTGCGATGGAATAATCATCAACCAAATTTTATATCTGTTTGTTCGTCTCTACTACATAATGGAACGTTAGTGGATGTCACTTTGGCTGCTGAGGGAAAGCAACTACAGGCCCATAAAATAGTTCTTTCAGCATGTAGTTcatattttcaaacattatttacTACTAATCCCTGTAAACATccaattgtaatattaaaagatGTCCAATATAACGATTTAAAAACAATGGTGGATTTTATGTATTATGGTGAAGTAAATGTTTCTCAAGAACAACTTCCACATATCTTAAAAACAGCAGAGATGCTAAAAATTAAGGGATTAGCAGAAATGCCTGCTGATGCTGCAACATTAACAAAATCTGATAATAAAACTGATCACACCGATCAATTACAAGGTAGCGGTGGTATAGGTACTGATTCAATATGGGGTAGTGCAGAAtttcaacagcaacaacaacaacatcaacagcagcaacaacaacaacaacagcaacaacaacaacagcaacaacaatctCAGCATCATCTGCATGGGACTCAACAACAAGTAAATCAAACACAAAATTTACATCAGTTAAGAAGAAGCCCGTCTCCAGGATCTATATCGTCACCTGTTGCAAGAAAGAAACGCGCCCGGAAAACTTCAAATAATGGACAAAATACAGATATAAGTAACAAAAGTTGTAATATGGATCAgtcaactaatataaatttaaatcaaataaatcaaatgcCCTTTAGTAATAATACTAATGTAACTCAGACTTTACacacaaaaattgtaaaagatatgTCCACCTCTGATCAACAACAAGAAACTTCATTAGAAGATATTGATTCCCATCAACACCATATAAAACCAGAGAATGATATCGGAGTACAACAATCAATACAGCAGGATATTTCTGGTGCTGCATCACCATCCGATTATGGTACAACAAGGGTAAGTTCTCAACCGCAATCAGCCCATTCTGGAGTACAATGGACAGTTGTTGATTCTAACTATAATCCAAgattttcattatcatcatgCCAATCTGGAATGTCATTGAGTGGCAATGGTGGTGGAAATGATAATCAAGATAGtggaaataaatcaaataatgacGGAAACGAAAATCATGCTGACGAATCTACaaaccaacaaaaacaaacaacaaatacAGTAACAAGtaatcaacaacaacagcaagGTCATATTCAAATTCCTTATCAAGATTCGCAATATTCATCTCAAATTATTTCTGTAAATAATCTGGTTGGTGGATATTCCCAACAccaacagcaacagcaacaacaacagcaacaacaacaacagcaacaacaaaatttatcaacTCCAACATCACCAAATGAATCCGCTATGGTACAATCGGTATATAGTCAAGGACCAACACCAACTCCATCTCCAGTATCTCATCAAATTTCACAATCTAACTCATCCACCCGAAATGCAACATCAACTGTAGCTGTTGTTGCTGCGTCTATAGCAACAACTCCAACTGCTAATAATACATCTTTAAACAGTTCTTtacaaaattcatcaaattcaaataatttttcaggaAGTAATGCTTCAGCGAATAGTTCAACGGGCGGTAATAACGTTTCTATGATTATAGGAACATCAGTAGCAAGTGGAACgcagcagcagcaacagcaaccacaacaacaacagcaacaacagcaacaacaacagcagcaacagcaacaaGGTACATCATCTTCCGCAGTAGTTAAGAGAAAACGTTCCGTAAATCCTCAAGCTGATGAAAACTTCATCAAAGCTTTGGAAGCTGTTCGTACTGGTGGTATAGGATTTTGTAAAGCAGCTCGAATATATGGTGTTAATAATCGTACATTATggttagaatataaaaaaagaggTTATTTAATTAGTCGACCAAGTATAAAAAATCGTATAAAATTAGAGCCAAATATGTCACCGCCCCCACCATCAACACCCACAAATGAAGAAACTagtattgaaaattatgaacatTTAAATCAGTCAGCTTTAAATATACAAGTACCGCCACCATCTGAAACACCAACGCCAATTATGTGTACACCACATACCCATATGGGTGTTATGAGTTTCTTGGACACAAGACATATTTCAGAATTTCCAACAACAACTGGAATTCATTCAATGTCAAGGCAACGGTATACAGATACTGGTTCAGTAAATGTTAATTCAGGAGCAATGAACTTACAAGGATTAAATTTTAACTCAATGTAG
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGKQLQAHKIVLSACSSYFQTLFTTNPCKHPIVILKDVQYNDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPADAATLTKSDNKTDHTDQLQGSGGIGTDSIWGSAEFQQQQQQHQQQQQQQQQQQQQQQQQSQHHLHGTQQQVNQTQNLHQLRRSPSPGSISSPVARKKRARKTSNNGQNTDISNKSCNMDQSTNINLNQINQMPFSNNTNVTQTLHTKIVKDMSTSDQQQETSLEDIDSHQHHIKPENDIGVQQSIQQDISGAASPSDYGTTRVSSQPQSAHSGVQWTVVDSNYNPRFSLSSCQSGMSLSGNGGGNDNQDSGNKSNNDGNENHADESTNQQKQTTNTVTSNQQQQQGHIQIPYQDSQYSSQIISVNNLVGGYSQHQQQQQQQQQQQQQQQQNLSTPTSPNESAMVQSVYSQGPTPTPSPVSHQISQSNSSTRNATSTVAVVAASIATTPTANNTSLNSSLQNSSNSNNFSGSNASANSSTGGNNVSMIIGTSVASGTQQQQQQPQQQQQQQQQQQQQQQQGTSSSAVVKRKRSVNPQADENFIKALEAVRTGGIGFCKAARIYGVNNRTLWLEYKKRGYLISRPSIKNRIKLEPNMSPPPPSTPTNEETSIENYEHLNQSALNIQVPPPSETPTPIMCTPHTHMGVMSFLDTRHISEFPTTTGIHSMSRQRYTDTGSVNVNSGAMNLQGLNFNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00363353;
- 90% Identity
- iTF_00160826;
- 80% Identity
- iTF_00160826;