Aleu012669.1
Basic Information
- Insect
- Argyra leucocephala
- Gene Symbol
- -
- Assembly
- GCA_963942445.1
- Location
- OZ012678.1:143728700-143734223[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3e-11 2.2e-08 34.8 0.0 4 39 324 359 321 364 0.91 2 3 0.16 1.2e+02 3.6 0.0 27 37 393 403 389 408 0.88 3 3 3.6e-14 2.7e-11 44.1 0.0 5 40 434 468 432 473 0.92
Sequence Information
- Coding Sequence
- atggaaaataatttgaaatggaTGGGACATACCTCAACAATATTTGAAATGCAAAGAGATATATTAAAGGAAGGAAGCTATTATGATGTtaaacttgtttttattaatggtGAATTTTTATATGCTCATAAAGCAATTCTAATATCATATAGCGATGTATTTAAGGAATGTTTGAAAAATATACCAGAAACATCAGATCGGGAAACCGTTATACTTTTAccggatattaaaaaaaatataatgttaaaaattttagaatttgtatATTTGGGTGAAGTAATATTAAACTGCACTGATTTAGCAGAATTCTTAGAAAGTAATACATTTTTGGGCATAAAGAACTCGATTAGTTTTGAATGCTCTTATCAGAACAGTTTCAATAATACACCACAACGTAGTGAAGAAAGTATAGAAATAACAACACAAACTGTCGAAATTCAAGATAAAGTGGTTTCTGACCCAATCAGTGATGAAATTAAGGATGATCAGCAACAAAAGGAATTTATTGTTTCAAAAGAAAGTgaagaacaaacaaaaagtaattcaacagttcatttgaaattaaatacagatGCGGAAATTATATCAAGCACACAAGATCAATTTACCACTATCGAAGAATTTGAGCAAGTTACCGTAAAAGATGGAGGTGATGGAGGAGAAAGTGAATATATAATAGCTGATAATCCTGAGACTTATCAAAAATCATTTACttataaacaagaaaaacattCACAAGGTTTGATTAAAATTGAAGTGTCTTCTATGCCAGTTGCAACAACATCTCAACAAAATCCATCTGAtacaacaatttataaaataactgaaGATGGCAATGTTGAAGGAGGAGGTGAATCATCTTCTTCACAATcagaatacaaaatatatagtatTGAAACAGCTTCACCTAcatcaacaaaatcaaaagGACTATATGGTggacaaaaattttatacagaaaGAGAACGTAATATTGTTTTGGCAATTAGAGATGTTTTAAAAGATAGGCTTAGTTTATCAAAAGctgcaataaaatataatatttctaaaacagtTTTATGGCGTAGATTAAGAAACGATCCACTATATAAACATGGTAGGCAACATCCATTGTTATCAGCTGCACATGAAAGATTAGGCAGAGGTGAATCTTTAAAGAGTATTAGTCAATCATTAAATATTCCAATGTCTACATTACATAGACATAAAGTTCGTCTGTTAGAGCAGGGATTCTTTCCCGATACTGGAATACAAGTTAAAAGAAGATTAGAAGAGGATaaacttaatacaaaaataaaattagaacaaGCTATTAAGGCATGTCAAATGGGTATGACACAAAATAAAGCAGCTCAAGATTTTGGTGTATCTAAATCAACTTTATGGAGACATTTTAAACGAACAAAAGCTTCAGAAACGTTAGATGACGATCAGTCGGGtgataattcgaaaaaatttgatGGATTAGAATATAGTACAATAGAATATACAATTGAAGAGCAGGATGTTGATCAAGAAATTGTTGAGGAAGAACAAGAATATTCTATATCTGAATTTGaagatgaagaaaataaatatagatcaattATATCTAAAACTAAACTTGAAAATCCAATAACGCTTTATGACGGATTAATTAGAGGTGATGAAGAACTTAAATATAGTCCGCGAACTCATTTTTGTGGTAAAACTAATATGGAACAACATGATCAAGTAAAATTTGTTGGGAATcgattagaaataaaatatcaaaaaaatgtttcaactaTGTCTGAAAATATTGAAGCAAAATATCAACcaactcaaaaattattaaataaatcatcacCACCATCACCGCCATTACCTCAATACGAAATTATATTCTCTAATttgaatactaaaattataaataataataatgcaaatgaaatacaattaGCTACAAATTTAGATTATCGACCTATAACATGTCCAATTTCACATTgtaaacataaacaaatttgtatttcagACTTTTCGAAACATATAAAAGTTGATCATGTCAGAATTCCAATTGAAACTATAAAATCAGGACAATgtcGTTTAGTATCATTAGATTTACCTATATTGTATACATTAGTTGTATGGTCAAACAATAACGGTAAATTTCCAATTACTAATTTAGTACAATCTGGTGAATTACTATCAATTAGAGAAGAACAAAaacctgaaaatatttttaaatgtggtAAAGGAATTTATTTAACATCAGATCAGTGTAAACGACTTACAAATAATggtaaaaatatgattaatttaCAAGTGTCAATTcgatgttaa
- Protein Sequence
- MENNLKWMGHTSTIFEMQRDILKEGSYYDVKLVFINGEFLYAHKAILISYSDVFKECLKNIPETSDRETVILLPDIKKNIMLKILEFVYLGEVILNCTDLAEFLESNTFLGIKNSISFECSYQNSFNNTPQRSEESIEITTQTVEIQDKVVSDPISDEIKDDQQQKEFIVSKESEEQTKSNSTVHLKLNTDAEIISSTQDQFTTIEEFEQVTVKDGGDGGESEYIIADNPETYQKSFTYKQEKHSQGLIKIEVSSMPVATTSQQNPSDTTIYKITEDGNVEGGGESSSSQSEYKIYSIETASPTSTKSKGLYGGQKFYTERERNIVLAIRDVLKDRLSLSKAAIKYNISKTVLWRRLRNDPLYKHGRQHPLLSAAHERLGRGESLKSISQSLNIPMSTLHRHKVRLLEQGFFPDTGIQVKRRLEEDKLNTKIKLEQAIKACQMGMTQNKAAQDFGVSKSTLWRHFKRTKASETLDDDQSGDNSKKFDGLEYSTIEYTIEEQDVDQEIVEEEQEYSISEFEDEENKYRSIISKTKLENPITLYDGLIRGDEELKYSPRTHFCGKTNMEQHDQVKFVGNRLEIKYQKNVSTMSENIEAKYQPTQKLLNKSSPPSPPLPQYEIIFSNLNTKIINNNNANEIQLATNLDYRPITCPISHCKHKQICISDFSKHIKVDHVRIPIETIKSGQCRLVSLDLPILYTLVVWSNNNGKFPITNLVQSGELLSIREEQKPENIFKCGKGIYLTSDQCKRLTNNGKNMINLQVSIRC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00160858;
- 90% Identity
- iTF_00160858;
- 80% Identity
- iTF_00160858;