Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_963942445.1
Location
OZ012677.1:79621821-79624994[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.2e-15 2.3e-12 47.5 0.0 1 38 8 46 8 50 0.97
2 2 2.5e-18 1.8e-15 57.5 0.0 1 43 491 534 491 536 0.95

Sequence Information

Coding Sequence
ATGACTGGCCGTCGTGCATATACTgaagaagaattaaataatgCCTTACAGGATATTATGAGTGGTAAATTAGGAACAAGACGTGCCGCTGTTGTATATGGTATACCAAGATCAACGCTTCgcaataaagtatataaaattgtatcagAACAAAGACGTGAAACATCAACACCATCATCTGTTCATATATttgatgctgatgatgatgaaaatgataatgataatgataccGATAAAATTGGTTTATCGGATGATGAAGCCAGCGATGATAAACTATTGGAAAGTTCCTTGTTATCTGATCATGAACAATCGTTGCGTTATGCAGCAAACTTACAAAAgcatagaaaattaaataatagcgGTGGTGGTGGTAGTAgtagtggtggtggtggtagtgGTTGTGGTGGTGGCGTTAGTGGTAGTGGTGGTGGCGGTGCTAGTTCTAATGATGAACAAATTAAACCATCAACAACACCTTTAGATTCAGTTTCAACAGCAGCTGGTACAACAATAGCGGCTggtgttcaaaataaaaatttaacaccaCAAACGTCACAAACACCGCCTGTTGGACCAAATTGGCTagatccaaatattttattacaaacttTATTGTTATCGGGTAGATTAACTGGTGGTAATACCAGTGCTGCTGGAGCAATTGCTAATTTAGCTAGTTTATTTACACCAAATACTGATGATACGGCAGCAATACgagatttattaaatgtattaaaattacagCAAGAagaactaattaaaaaattatcaaatgatTCAACAAAtcgagaaaatttaaataatggcaATCCAACATTAGATTCAATGCAattaatgcaaaatttaaaacaacaacagcaactgGGACAAATACACCAACATCATCTTCATCAAGCACATTTACCAAAGTCTGATACACCAGAAACTGGATCATCAATTGATATAAATGAAACAAGCGAAGATggtgttatattaaaaattccgTCCTTCAAACCAGTTGTACCTGCATCATCATCGTCAACAGCATCATCAATAAAAAGTTgcgatcaaaatcaaatttcacCATCGTCAACATCAGCACATCATACAATTGCACCAATATTATCAAGAAGTCCAcatcaaccaaataatttatcTGGAATATCACCACCATTAATGCGTCAAAGTAGTGAATCACAATCACCACCAGGTGTGTCGATGCGTGAAATTATTGCAAATAGTTTAAATCGttttaatcaacaaaatatcaaaGATAATAGTATGGGTAAATCATCGCATCCTTATAGTGTTAGCGATTTAAATGAACAATATGCTAAAAGAGCTAGTAtatcagtaattaaaaatattggtggtactgatataacaaaatttgctGCAActccaaatttattaaataattatcaaaattcagCAAATCAGTGTGCAGCTGGTAAAGGTACAAGACCAAAACGAGGAAAATATCGTAATTATGATCGTGATAGTTTAACTGAAGCTGTTAAGGCTGTGCAACGTGGTGAAATGTCTGTACATCGTGCTGGTAGTTATTATGGTGTACCACATTCAACATTAGAATATAAAGTTAAAGAAAGGCATTTAATGCGTCCTAGAAAACGTGAACCAAAACCACAACCATTAGATGGGGGTAACAATACTGGTAGtacatcatcaacaacaaattcaaaacaTTCAAACATTCCAGGTTTAACGGCTgttaataatatagataaattaaaaacatcagTAGgacatcaacaacaaaaaacagcTTTAAAACCAAATCAAACATCAGCATTCCCAAATACATCTCCAAATGGTATGAAAGTACCAATGTTTGATCCCACCTTAACGGCACAATTACAATATGCTGCGCCGCATATATTTTGGCAACATTCTGCAGCTGCAGCTGCCGGCTTTAATGCATTACCAATGGAATTTTCACCAACCGGTCGAACAACATCAACAGGTCCTGGTAATGGATCATCAGGAAATTCAACTGCCACATCACCCGGTCAACAACCAAATCCATTTTCACCAAATACAGATAGTTTTCTTGCAACACAAATGATTCAACGTTTCCATGAGGAATCAAGAATGAATGCTGCTGCAAACAATAATAGCAAATCACCTTCATTAGCTGGTAacaatgttaatataaataataataataataacaataataataataatagtaatagtataaataataacaacaataatagtaCGTCAAATGTGCCTCTTAAGACAGCTCGTGAAATTGCCCAAAGTTTATATGACAGTGGTAGCGCAAATGGATCATTTCTAGATGGTATTATAAGACAAACATTAGATCGTAAAACAAATAGTGATATATCACATGGAGCGTTATTcgatcaattaataaaaaatacaaaacctcCATTATTATCATCAGCAAGTACATTAGCTGGTGGTTcaacaccatcatcatcatcatcatcttctgAAATCCATTCGCATGCATTAGTCAATGCGCTAACAAGTAATAAAAGGTCAGCCAGTCCAAATATGTATCCTGtgattaatataaaaagagaACGATCAAATTCTCCATCACCATTAACATCAAATGCTTTAATTGGTAATAATTTGAGAGATGATCGTGATttacatcatcatcaccatcatcagcAACATCAGCATCACCACCATCATTCGAAACGTAATTCAATAAATGATGATACAGATTCAAATAcagatgttaaattaattagagAAGCATCTGCAGATAGTTTAATTAAAGCACGATTAGAAGGTATTATGATTAAAACAGAAACAAATGAACAACATCATAATCAACAACATCATACAGATACAATACAACAAAGACATCACACAAATACATCaacgtcatcatcatcatcatcatcatctggtGTTAATCAAACTATTAATACAAATTCTACTGGTCCAGTTAATATTAGTCATACAATTACCTTAGATGATTTAAAtggtaataataacaataataataacggcGAAGGTAGTACAAGTTGTAGTACAGGTGTAAGTCTAAGAActgataatgaattaataaataaagacaGTAGTAGAGGTACAGGTGTaacaactaataataatattaataatcccAGTGATGATCTTATTCTTAAAAGTAAATTAGGTCTTATTAAATCCGAAACGGATGAAAATTTATAG
Protein Sequence
MTGRRAYTEEELNNALQDIMSGKLGTRRAAVVYGIPRSTLRNKVYKIVSEQRRETSTPSSVHIFDADDDENDNDNDTDKIGLSDDEASDDKLLESSLLSDHEQSLRYAANLQKHRKLNNSGGGGSSSGGGGSGCGGGVSGSGGGGASSNDEQIKPSTTPLDSVSTAAGTTIAAGVQNKNLTPQTSQTPPVGPNWLDPNILLQTLLLSGRLTGGNTSAAGAIANLASLFTPNTDDTAAIRDLLNVLKLQQEELIKKLSNDSTNRENLNNGNPTLDSMQLMQNLKQQQQLGQIHQHHLHQAHLPKSDTPETGSSIDINETSEDGVILKIPSFKPVVPASSSSTASSIKSCDQNQISPSSTSAHHTIAPILSRSPHQPNNLSGISPPLMRQSSESQSPPGVSMREIIANSLNRFNQQNIKDNSMGKSSHPYSVSDLNEQYAKRASISVIKNIGGTDITKFAATPNLLNNYQNSANQCAAGKGTRPKRGKYRNYDRDSLTEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPLDGGNNTGSTSSTTNSKHSNIPGLTAVNNIDKLKTSVGHQQQKTALKPNQTSAFPNTSPNGMKVPMFDPTLTAQLQYAAPHIFWQHSAAAAAGFNALPMEFSPTGRTTSTGPGNGSSGNSTATSPGQQPNPFSPNTDSFLATQMIQRFHEESRMNAAANNNSKSPSLAGNNVNINNNNNNNNNNNSNSINNNNNNSTSNVPLKTAREIAQSLYDSGSANGSFLDGIIRQTLDRKTNSDISHGALFDQLIKNTKPPLLSSASTLAGGSTPSSSSSSSEIHSHALVNALTSNKRSASPNMYPVINIKRERSNSPSPLTSNALIGNNLRDDRDLHHHHHHQQHQHHHHHSKRNSINDDTDSNTDVKLIREASADSLIKARLEGIMIKTETNEQHHNQQHHTDTIQQRHHTNTSTSSSSSSSSGVNQTINTNSTGPVNISHTITLDDLNGNNNNNNNGEGSTSCSTGVSLRTDNELINKDSSRGTGVTTNNNINNPSDDLILKSKLGLIKSETDENL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-