Basic Information

Gene Symbol
ct
Assembly
GCA_963942445.1
Location
OZ012681.1:123134574-123157310[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.6e-27 3.5e-23 82.5 0.0 3 75 548 621 546 625 0.94
2 3 3.4e-32 4.5e-28 98.2 0.0 2 77 959 1035 958 1037 0.96
3 3 8.3e-31 1.1e-26 93.7 0.0 3 76 1195 1269 1193 1272 0.96

Sequence Information

Coding Sequence
atgcAGCCATCTTCGCCACAAACTAACGGTGGAACAGCCGATATGGATTTAACGGCTGTTCAATCAATggattggtttttaaaaaaagaacgaATCTATTTATTAGCACAATTTTGGCAACAGaGAGCTTCGTTAGCTGAAAaagaagtaaataatttaaaagaacaaaTATCATCAAATACAGTAGgagcaacaacaacaccaagtacaaatacaacaacaaataattcattaaatttaaaacaacaacaacaacagctaCAACAAACAAATCCTATTACAACAGATTTATCATCACGTATTAGTATATCAATACCACCAACAacacaacagcaacaacaacaacaaaataacggTGCATTTATTGCTGAAGCACCGTCACCATCACCACCTCTATCGGATACTGGTAGTACAACAAGTACTGCCAAAgataaagaaatcaaaatattagCAAATGAAGTATTACGCTTGAAAACATTAAATGATGAGCAAggaaaagaaattgaaaaattacaagaaagtattaaagataaaatagagataatagttaaattagaagctaaaaaattacaacaaaataaacaaaatgaattaaaagaatcaaataatagtcaaattaatgaaatactAAAAACAACAACGCAACCATCATCCATAATAACACAAtcatcaattattaataattcaatattaacaGCTACATCATCAGTTACATCATCAGAAACAATGAAAccaaatgaaatagaaaaaataattgatactCCATCAATAATAATTCCACCACCGACagatatagaaattaaaaaagaaaaaatagttgatACAACTGCATCAGAAGATGGTGGTGATATTGATGATGTACATGATATAATGTcatcaccaccaccaccaccaccaccaccaccaccaccacaacTACCACTACCAATATCAACAATTCCACCTTTACCGTCCGAACCAAAAGATTTTcaagaattattatttgaacgTACTAAAGCTCTAGTTGCTgcacaacaacaacatcaacatcaacaacaacatcaacaacaacatccACAACATCCTTTACAACATTTACATCATCCACATCATCTTCATTATCAATCTAATGATAAATTAAGTAGTTTAagtaattttgttgaaaataccGGTTTAAAAACACCATCACTTGACTATAATGACAAATCAAATAATCATTTGGGTGGTAGTAGTGGTACAACATCTGATTCAAAAACAAGTACACCAAATTTACAAGATGATCGTAGATCAGATGATATTTTATCACAAACAGTTgctcaacaacaacaacaacaacagcagcagcaacaccaacagcaacaacagcatcaacaacaacaacaacaacgaaataatgatattttaaatggtAGTGGTATTAATAGTAATGATCCAATGACaccaaatacaaatatattcagTCCATTACAACATATGCCAAGTGGATTTTTACGTGCATTACCATTTCCATTTCAAAATCgtccaaattttcaatttcctgATGATTTACCAATGCATGGTTCAATGACATCACGTTTGGGTGAATCGCTAATACCAAAAGCTGATCCATTGGAAGCTAAATTACAAGAAATGTTAagatataatattgataaatttgcaaatcaaaatttagaTACACTTTATATATCGAGAAGGGTACGTGAACTGTTATCAGTTCATAATATTGGTCAAagaatatttgcaaaatatgttCTGGGTTTATCACAGGGTACTGTTTCAGAATTATTATCAAAACCAAAACCATGggaaaaattaactgaaaaagGACGTGATAGTTATCGTAAAATGCATGCATGGGCATGTGATGAATCAGCGGTGCTAATGTTAAAAACAATGATACCCAAAAAAGATTCTGGACTTCCTCAATATGATTCAGATGATCGTAGCCATAGTATAATGTCAGAATCGGGAGCTGCAGCTGCTGCAGCCGCTGCTGCTGCCGCTATTATGAATCGAGGTAATCATCCGGGACAACATAATGAACATAGCTTAGATATTAGTAAAGATAATGATATGCAACAGCATAATGATGAATCACGTTCACCGTTACCGAATGCATGTTCATCAccaatttataaagaaaatatgaaatttaataaatctgatGAATTTGCTGCACGTGATAAAATTGCCAGAAGTTATCAAGAAGAATTTGCTAAAATGATGATGAGATCTCAAAAAGATGAATTCCAAAGttcattttttcCACAATTCCACAGTGGTGGTATGCCACCAAATCCCCAACTTCACAATGAGAATATACGATTAGCAATTGAAAATTATCATCGGGAATtagcaaaattacaaaattttccaaGTTTACTTGCCTTACAACATCAAAATGCATTGGCAATGAATGGTTCTGTACAGGATTTATCCGTGTCAAAAGATAAAGATACAAATAAATCGATAAATGATAATCATTCAAAagattcattttcaattaatgagcaatcaaatcaaaaatctgATGATCCAAATGATTTAAGTCGTGATTCATTTAAACATGAtagttcatttaatttatcatcatcacaatcaaaacaacagcaacaacatcaacaacaacaacaacaacaactcgattcaaataaatcaaataatagtttttcacgTAGTGATACACCAATGTCAGCTCCCAGTCCAttagtaaattcaattttaccaCCAGCAATAACACCAAATGATGATTTTTCAGCATCAGTAAGTCCACTTCAAAGAATGGCATCAATAACAAATTCATTAATAACACAACCACCAATACCACAACATCATCAACAACCTCAACGACCAAAAACTGTTTTACCACCAATTACACAACAACAATTCGATATGTACAATAATCTAAACACTGAAGATATTGTTCGTCGGGTCAAAGAAGCTTTATCACAGTATTCAATTAGTCAGCGATTATTTGGTGAATCAATATTAGGACTATCTCAAGGTTCGGTATCAGATTTGTTGGCAAGACCAAAACCCTGGCATATGTTAACGCAAAAAGGACGTGAACCCTTCATTCGAATGCAAATGTTCTTAGAGGATGATAATGCTGTTCATAAATTAGTTGCCAGTCAATATAAAATAGCTCCAGAGAAATTAATGCGTACCGGAAGTGCTTATAATACAAGTCCACAAATACCATCGAATTTGGCACCTAAACTTGATGGTATGGTTGGTATGTCAATGCCAAAAGGTTTACCAGATATGAAAAATCCTCCAGAATCACTTCCCCAACATATAATGCAACAGATGCGTGCTTCAATAATGGCAAGATTTCCAGGATCAGCAGCAGCAGCTGCTGCAGCTGCCGCAGCCGCTGTTAGTGGAGGTAATAATAATCCGGGGGGTGCTGGTGGTCCACATCAAGGTATGCTTTTAACACCACCCGGATTACCACCACATCATGCTATTACATTACAAAGTAGTCAAGAAAAGAAACCACTACAACAAATGATGCCATCTCATATACAACAACAAGTGAATTCAATGCGTGGTCAAAATCAACATGTTTCACCAACCGTTTATGAAATGGCAGCACTAACACAAGATCTTGATACACAAGTAATAACAACACGTATTAAAGAGGCATTACTGGCCAATAATATTGGTCAGAAAATTTTTGGTGAAGCTGTATTAGGTTTATCACAAGGATCCGTCTCAGAATTATTATCAAAACCAAAACCTTGGCATATGTTAAGCATTAAAGGTCGAGAACCATTCATTCGTATGCAATTATGGTTGTCGGATGCAAATAATGTTGAACGCTTGCAAACAATAAAGACTGAAAAACGTGAGGCTAGCAAAAGACGTCGTTCAATTGGTATGGGTGGCAGTCATGATAACAATTCCGATTCAAATAGCAATGATACAAatgatttttatacaaatagtCCAGATCCGAATTCGGTTGGTTCGTCCGGTACACcaccaaataaaaaacaacgtGTTCTATTTTCTGAAGAACAAAAAGAAGCTTTACGTTTAGCATTCGCATTAGATCCATATCCAAATGTAGCTACAATAGAATTTTTGGCAAATGAATTAGGTTTAGCAACAAGGACAATAACAAATTGGTTCCATAATCATCGAATGCgtttaaaacaacaaatgcCACATGGTGCACCAAATGAACCGATACCATCACGTGAAAATCAAACTGGTGCCCCATTAAATCcagttcaatttaaaattttattaagtcaaAGACTTATGGAATTACAAAAAGAGAAATTAGGTTTAAGTGGTATGCCATTATTATATCCACCATATTTTGCTGCAAATCCAAATTTAGCTGCATTAATTGGTGGCGGTTTACTTCCATCCaatgaaaatgaattacaaGCATTAAATGCTGCATTTAAAGAGCAAATGAATTGTTTAGATTTATCAATAAGTCATCCAGGTGGTGTTGAAATGccaagaattaaaaaagaagaTGATCTAATTGATAATGATTATGGTGATGATGATAGTAAAACTGATGTTAATGATAATGATACAACatcaaatattgatttaagtgaattacataataataataataataacaataataatataaaatcaccATCAGAACatgataatttttcaaatcaaagaaaTCAAGAAGATGaatcaaataatacattaaCATCAATTGAATCACAATCACAAAGATCATCACGTAGAAAAACCAATGCACCACAATGGGTTAATCCTGATTGGCAAGATGAAATCggtaatatatcaaaaaattcatCTACAGTTGGACAACCATTGGTATCTAGTATTAATTtagtacatgaaaaaaatttaattaataataataataacaacaacaacaacaacaacaacaacaatgaagaaatatctataaaagaaTCTATATTATGTGAAAGTGATAATGTTGCGGTTGTCACAAATGACAATTCACAATCTGAAGTTAACAGTGAAGATAAACAAACGTTATTAGATGACAGCAATGTTGAAGCtacagattaa
Protein Sequence
MQPSSPQTNGGTADMDLTAVQSMDWFLKKERIYLLAQFWQQRASLAEKEVNNLKEQISSNTVGATTTPSTNTTTNNSLNLKQQQQQLQQTNPITTDLSSRISISIPPTTQQQQQQQNNGAFIAEAPSPSPPLSDTGSTTSTAKDKEIKILANEVLRLKTLNDEQGKEIEKLQESIKDKIEIIVKLEAKKLQQNKQNELKESNNSQINEILKTTTQPSSIITQSSIINNSILTATSSVTSSETMKPNEIEKIIDTPSIIIPPPTDIEIKKEKIVDTTASEDGGDIDDVHDIMSSPPPPPPPPPPPQLPLPISTIPPLPSEPKDFQELLFERTKALVAAQQQHQHQQQHQQQHPQHPLQHLHHPHHLHYQSNDKLSSLSNFVENTGLKTPSLDYNDKSNNHLGGSSGTTSDSKTSTPNLQDDRRSDDILSQTVAQQQQQQQQQQHQQQQQHQQQQQQRNNDILNGSGINSNDPMTPNTNIFSPLQHMPSGFLRALPFPFQNRPNFQFPDDLPMHGSMTSRLGESLIPKADPLEAKLQEMLRYNIDKFANQNLDTLYISRRVRELLSVHNIGQRIFAKYVLGLSQGTVSELLSKPKPWEKLTEKGRDSYRKMHAWACDESAVLMLKTMIPKKDSGLPQYDSDDRSHSIMSESGAAAAAAAAAAAIMNRGNHPGQHNEHSLDISKDNDMQQHNDESRSPLPNACSSPIYKENMKFNKSDEFAARDKIARSYQEEFAKMMMRSQKDEFQSSFFPQFHSGGMPPNPQLHNENIRLAIENYHRELAKLQNFPSLLALQHQNALAMNGSVQDLSVSKDKDTNKSINDNHSKDSFSINEQSNQKSDDPNDLSRDSFKHDSSFNLSSSQSKQQQQHQQQQQQQLDSNKSNNSFSRSDTPMSAPSPLVNSILPPAITPNDDFSASVSPLQRMASITNSLITQPPIPQHHQQPQRPKTVLPPITQQQFDMYNNLNTEDIVRRVKEALSQYSISQRLFGESILGLSQGSVSDLLARPKPWHMLTQKGREPFIRMQMFLEDDNAVHKLVASQYKIAPEKLMRTGSAYNTSPQIPSNLAPKLDGMVGMSMPKGLPDMKNPPESLPQHIMQQMRASIMARFPGSAAAAAAAAAAAVSGGNNNPGGAGGPHQGMLLTPPGLPPHHAITLQSSQEKKPLQQMMPSHIQQQVNSMRGQNQHVSPTVYEMAALTQDLDTQVITTRIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQTIKTEKREASKRRRSIGMGGSHDNNSDSNSNDTNDFYTNSPDPNSVGSSGTPPNKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLANELGLATRTITNWFHNHRMRLKQQMPHGAPNEPIPSRENQTGAPLNPVQFKILLSQRLMELQKEKLGLSGMPLLYPPYFAANPNLAALIGGGLLPSNENELQALNAAFKEQMNCLDLSISHPGGVEMPRIKKEDDLIDNDYGDDDSKTDVNDNDTTSNIDLSELHNNNNNNNNNIKSPSEHDNFSNQRNQEDESNNTLTSIESQSQRSSRRKTNAPQWVNPDWQDEIGNISKNSSTVGQPLVSSINLVHEKNLINNNNNNNNNNNNNNEEISIKESILCESDNVAVVTNDNSQSEVNSEDKQTLLDDSNVEATD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00160554;
90% Identity
iTF_00160554;
80% Identity
iTF_00160554;