Basic Information

Insect: Argynnis bischoffii
Gene Symbol: stc
Assembly: GCA_033884665.1
Location: CM066615.1:3570663-3583026[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 2.9e+04 -4.3 1.6 15 19 490 494 489 494 0.81

2 13 0.049 7e+02 1.0 1.4 2 10 522 530 522 530 0.92

3 13 3.7e-05 0.53 11.0 18.1 4 19 538 553 536 553 0.93

4 13 5.6e-08 0.0008 20.0 14.1 1 19 589 607 589 607 0.97

5 13 0.00011 1.6 9.5 16.4 1 19 648 666 648 666 0.99

6 13 1.2e-05 0.17 12.6 12.5 1 19 707 729 707 729 0.88

7 13 2 2.9e+04 -4.7 1.7 6 10 759 763 759 763 0.95

8 13 0.015 2.2e+02 2.7 7.3 1 11 769 779 769 780 0.93

9 13 0.058 8.4e+02 0.8 0.6 4 10 784 790 783 790 0.92

10 13 1.4e-06 0.02 15.6 15.8 3 19 798 814 796 814 0.92

11 13 0.00066 9.5 7.0 10.8 9 18 860 869 858 870 0.92

12 13 2.5e-08 0.00036 21.1 12.9 1 17 906 924 906 929 0.86

13 13 0.015 2.2e+02 2.7 14.4 1 18 936 958 936 959 0.74

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	2.9e+04	-4.3	1.6	15	19	490	494	489	494	0.81
2	13	0.049	7e+02	1.0	1.4	2	10	522	530	522	530	0.92
3	13	3.7e-05	0.53	11.0	18.1	4	19	538	553	536	553	0.93
4	13	5.6e-08	0.0008	20.0	14.1	1	19	589	607	589	607	0.97
5	13	0.00011	1.6	9.5	16.4	1	19	648	666	648	666	0.99
6	13	1.2e-05	0.17	12.6	12.5	1	19	707	729	707	729	0.88
7	13	2	2.9e+04	-4.7	1.7	6	10	759	763	759	763	0.95
8	13	0.015	2.2e+02	2.7	7.3	1	11	769	779	769	780	0.93
9	13	0.058	8.4e+02	0.8	0.6	4	10	784	790	783	790	0.92
10	13	1.4e-06	0.02	15.6	15.8	3	19	798	814	796	814	0.92
11	13	0.00066	9.5	7.0	10.8	9	18	860	869	858	870	0.92
12	13	2.5e-08	0.00036	21.1	12.9	1	17	906	924	906	929	0.86
13	13	0.015	2.2e+02	2.7	14.4	1	18	936	958	936	959	0.74

Sequence Information

Coding Sequence: ATGTCTCAGTGGAATAACTCTTATAACTACAACAATCAATATCAGGCACCTAATAATTGGAATGGTGATTACAATAATCAATATGTAAATCAAGCTTACTATCCTAATAGACAATATGACCCTAGTAGTCAATATGTTAGTTTTGATGAATTTTTGTCTCAAATGCACATTTCAAATGTTCCTCAAACAAATCCTGCGAGCTACAATAATATGCAATATCAGAATTACCCTAACactcaatataataatatacctaattatcAAAATGGATCTACAGCACATAACTCGCAAACAGAATATATGTATGGATCAAACACTGCCAGTTATTCTAATAATGAAGAATCTTATCAACCAAACATGCAAAATCAATATAATCCAGTGACCTCAGATCAGaataattatacaaatgaaATGGTTTTTAAATCAAAGTTAACACCAACAGCTACTGAATTTGTTCCTAAAAACTCAAAGGAAAAACCAGTTAGTAATTGTAACAAAGAATTAGCTCAAGAACCAAGCTCATCAAGTATAGCAGTAAGTGAATCATCTAGTAATTACTCTAAACCATCTAGTTCAAGTAATTGGAGGGAAAGACCTCAAAGTTCTCATCAGGGCAACAGTTCAACTTCTACAGAAACTAATAACTCATTCCACAAAACCTCTAAAAATCAGGATTCTAACAATAGGAATATGAAAAATGAATCAAGAAATCGTAATCAAGAATATCATAATAGTCAGACTGAACCTGTAAGTAACAGTTCTAAAAACAAAGACTCTTCAAGCCGTCCCAATGAATTAAATTCTCGTAACAGAAAATCTAAAAACCGATTACCTGAAAATAATCATGATGCAAATTATCGTAACCAAGATCATCAAGAATTTACTAACAACCATAGATCAAATCGTAATAATGATCTTAATACATATAACCAAGATAGTAGAAGTTATCAGGATGATTATGGTTTTTCACATGATACTAATAATTATGAAGGGGGCCAATCAAAACATTCAAAGGCTAAAAATAAAGAGTCTGATGTAGGGCGCACTTTTTACAATAGCGCAATGCCTAAAGAAAGTCAAGATGTGAGGAATGGAAGAGAGGGATCTGGAAAAAGTCGTAAATGGGCTGGTAGTCAAAGACTAAGACCTGCAGAACGCAATTTTGTTGAAGATGAGCAGTATGCTAGCTCATATGTGCAACCTAGAGAGGAAAAAGTAAAAGATAATGTACCAAGCCCAATGAAAGCAAGGAATAAATTAGTTGTTAATACAGGAGcaaACATAGAGATGACACAGCGTGAACGTCTCAGTGAACAGCTAGATAAAGGGACGCTTGAATGCCTTGTGTGCTGTGAAAGGGTAAAACAGATAGATCCAGTGTGGTACTGTGGAAATTGCTACCATGTATTCCATCTCCGTTGCATTAGAAAATGGGCTATGAGCAGCATGGTTGAAAGCAAATGGCGGTGTCCAGCCTGTCAGAACACAAATCAGGATATTCCAACCGAATACAGATGTATGTGCGGGGCGGTGCGCAACCCGGAGTTCCAACGAGGTTCCAGCGGTGCACACACTTGTGGCAAAGCATGTAAAAGATCAAGGAACTGTCCTCATCCTTGCACTTTGCTTTGTCACCCTGGACCTTGTCCACCATGTCAAGCTACAATTAGCAAACAATGCGGATGTGGCGTCGAGACCCGCTCAGTGCTCTGCAGCAGCAAGCTGCCCCAAGTGTGCGGCCGGCAGTGCAACCGCAAACTCGAATGTGGCGTGCATTCCTGCACTAAGGACTGTCATGAAGGACCCTGTGACCCTTGCACGGAGACTGTTACACAAATCTGCCACTGCCCCGCTGCCGCGTCGCGCACCGTGGCGTGCACGGCGGGCACGGGCGGGGAGCGCGCGTGGGCGTGCGGCGCGGCGTGCGCGCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCACGCCCTGCCACGCGCCGCCCTGTCCGCCCTGCCCGCTGCGCCCGGACAACGTGCCCACCTGTCCTTGTGGGAACACTAGAATTCATAAGGACCAACGTAAATCTTGTACGGATCCAATACCGTTGTGCGGCAACATCTGCGCCAAGCCTCTGCCGTGTGGGCCTCCAGGAGACAAACATTTCTGTAAAGAAAAATGTCAtgaagGTAGTTGTCGCGTGTGCCCCGACACCACGCTGCTGCAATGCCGCTGTGGACACTCTAGCCGCGAGGTGCCGTGTGCAGACCTGCCGCAgatgtacaataatatactgTGTCAGAGGAAGTGTAATAAGAAGCTGTCGTGCGGGCGGCACCGCTGCCGCACGGCGTGCTGCGCGGCGGCGTCGCACCGCTGCGCCGTGGTGTGCGCGCGCTCGCTGCCCTGCCAGCTGCACCGCTGCGAGGAGTTCTGCCACACCGGCCACTGCCCGCCCTGCCCGCGCGTCAGCTTCTCGGAGCTCCGGTGCGAGTGCGGGCGCGAGGTGGTGCTGCCGCCCGTGCGCTGCGGCACCAAGCCGCCGCCGTGCGCCGCGCcgtgccgccgccgccgcgcctgCGCGCACCCGCCGCACCACGCCTGCCACCCGGGCGACTGCCCGCCCTGCGTCGTGCTCACCACCAAACGATGCTATGGGGATCACGAGGAACGTAAAACGATCCCGTGCTCGCAAGAGGAGTTCTCGTGCGGGCTGCCGTGCGGCAAGCCGCTGCCTTGCGGGAAGCACACCTGCATCAAGATATGCCATAAGGGACCTTGTGATACTGGCAAATGCACGCAGCCGTGTGCGGAGAAGCGTCCGATGTGCGGACACCCGTGCGCGGCGCCGTGCcacgcgggcggcggcggcgcgtgccccgcgcccgcgccctgCCGCCGCCCCGTGCAGGCCACGTGCCCGTGCGGCCGCCGCTCCGCCGAGCGCGCCTGCTGCGACAACGCCAGGGACTATGCTAAAATGATGAGCACGTTGGCTGCTGCGAAGATGCAAGAAGGTGGTACAGTCGATTTGTCTGACCCTCAACGTCCCGGAAACATGTTGAAAACACTGGAGTGCGACGAGGAGTGCTTAGTAGAGGCGCGTTCGCGGCGCTTGGCGCTGGCGCTGCAGATCCGCAACCCGGACGTGTCCGCCAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCGCCACCGCCGCGCGCGAGCCCGCCTTCGCGCAGCACGTGCACGACCGCCTTACCGAACTCGTGCAGCTCGCTAAAAAGTCGAAACAAAAGACGCGTGCGCATTCCTTCCCCTCAATGAATAGACAGAAGAGACAGTTCATACACGAGCTGTGCGAGCACTTCGGCTGCGAGAGTGTGGCGTACGACGCGGAGCCCAACAGGAACGTTGTAGCTACTGCTGATAAAGAAAAGTCGTGGCTGCCGGCGATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGCCGCGTGCCGGGGCCCGTGctgcgcgcgccgccgcccgccgcgccggccgccgcgcccgccgccgcctcCGCCCAGAAATCATCCGGAGGCTGGGCGACATTGACGTCGACTAACGCGTGGGCGGCGCGCAACGCTCGCAAGGAGGAGCCCAAGATCGACTACTTCGACAACCCGCCCGAAAACTAA
Protein Sequence: MSQWNNSYNYNNQYQAPNNWNGDYNNQYVNQAYYPNRQYDPSSQYVSFDEFLSQMHISNVPQTNPASYNNMQYQNYPNTQYNNIPNYQNGSTAHNSQTEYMYGSNTASYSNNEESYQPNMQNQYNPVTSDQNNYTNEMVFKSKLTPTATEFVPKNSKEKPVSNCNKELAQEPSSSSIAVSESSSNYSKPSSSSNWRERPQSSHQGNSSTSTETNNSFHKTSKNQDSNNRNMKNESRNRNQEYHNSQTEPVSNSSKNKDSSSRPNELNSRNRKSKNRLPENNHDANYRNQDHQEFTNNHRSNRNNDLNTYNQDSRSYQDDYGFSHDTNNYEGGQSKHSKAKNKESDVGRTFYNSAMPKESQDVRNGREGSGKSRKWAGSQRLRPAERNFVEDEQYASSYVQPREEKVKDNVPSPMKARNKLVVNTGANIEMTQRERLSEQLDKGTLECLVCCERVKQIDPVWYCGNCYHVFHLRCIRKWAMSSMVESKWRCPACQNTNQDIPTEYRCMCGAVRNPEFQRGSSGAHTCGKACKRSRNCPHPCTLLCHPGPCPPCQATISKQCGCGVETRSVLCSSKLPQVCGRQCNRKLECGVHSCTKDCHEGPCDPCTETVTQICHCPAAASRTVACTAGTGGERAWACGAACARVLACGAHVCRTPCHAPPCPPCPLRPDNVPTCPCGNTRIHKDQRKSCTDPIPLCGNICAKPLPCGPPGDKHFCKEKCHEGSCRVCPDTTLLQCRCGHSSREVPCADLPQMYNNILCQRKCNKKLSCGRHRCRTACCAAASHRCAVVCARSLPCQLHRCEEFCHTGHCPPCPRVSFSELRCECGREVVLPPVRCGTKPPPCAAPCRRRRACAHPPHHACHPGDCPPCVVLTTKRCYGDHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKICHKGPCDTGKCTQPCAEKRPMCGHPCAAPCHAGGGGACPAPAPCRRPVQATCPCGRRSAERACCDNARDYAKMMSTLAAAKMQEGGTVDLSDPQRPGNMLKTLECDEECLVEARSRRLALALQIRNPDVSAKLAPRYSEHVRATAAREPAFAQHVHDRLTELVQLAKKSKQKTRAHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRRVPGPVLRAPPPAAPAAAPAAASAQKSSGGWATLTSTNAWAARNARKEEPKIDYFDNPPEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00213096;
90% Identity: iTF_00213096;
80% Identity: -