Basic Information

Insect: Argynnis bischoffii
Gene Symbol: Mtf1
Assembly: GCA_033884665.1
Location: CM066618.1:13575742-13587661[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 6.8e-06 0.00057 20.8 0.8 1 23 114 138 114 138 0.99

2 7 0.0057 0.48 11.6 0.3 1 23 144 168 144 168 0.95

3 7 0.00011 0.0094 17.0 0.8 1 23 174 198 174 198 0.98

4 7 1.2e-06 0.0001 23.2 1.5 1 23 203 227 203 227 0.97

5 7 1.1e-05 0.00093 20.2 2.5 1 23 233 257 233 257 0.97

6 7 0.013 1.1 10.6 0.1 1 22 263 286 263 286 0.92

7 7 1.1 91 4.5 3.1 2 23 621 644 620 644 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	6.8e-06	0.00057	20.8	0.8	1	23	114	138	114	138	0.99
2	7	0.0057	0.48	11.6	0.3	1	23	144	168	144	168	0.95
3	7	0.00011	0.0094	17.0	0.8	1	23	174	198	174	198	0.98
4	7	1.2e-06	0.0001	23.2	1.5	1	23	203	227	203	227	0.97
5	7	1.1e-05	0.00093	20.2	2.5	1	23	233	257	233	257	0.97
6	7	0.013	1.1	10.6	0.1	1	22	263	286	263	286	0.92
7	7	1.1	91	4.5	3.1	2	23	621	644	620	644	0.93

Sequence Information

Coding Sequence: ATGGCCGTTTGGCTCGGTGACAGCGGCTTTTCAAAAATTGATACACAAAACGATTTAGATAGTTTGCTAggtgataattttaatttaaattgcaataTAAAATGTGAATCATCTGACAGACTTTCTAGAGATTTCCCTCAGATCACTTGCGACATAAAACTCTTAGATAGTGTGACGTCGGAGATTAAAGTAGTTCCCAAGGACAAAACTACAGATTGTAGAATTGAAATAGTATCAAGTAATAATGAGAGATTGCCTGATGCACCACAAGCAACTGTTGAACTACCAAAATCAGTCATGGATAAGCACAAAAGAAAAGTGGAGGATAACAGTGCAAGATATAAGTGTGAATATGAAGGCTGTGAAAGAACATACAGTACTGTGGGCAATTTACGAACCCACATGAAGACACATAAAGgTGAATACAGGTTTATATGTCCAATGCAAAGTTGTAATAAAGCATTTCTCACATCATACAGTCTAAAAATACATGTGCGGGCACACACTAAAGTAAAACCATTTACATGCAATATCGGGAACTGTAACAGAGCATTCAATACATTGTACAGACTCAAAGCACACCAAAGACTACACAGCGGCGACACATTCAATTGCAAAGCAGACGGCTGCTCGAAATTCTTTACAACACTAAGCGATCTGAAAAAACACATACGAACACACACACAAGAAAGGCCTTATAAatGCGTAACAGATGGATGTGGCAAGTCTTTTACAGCGTCGCATCATCTCAAAGCGCACGCGCGCACGCACTCGGGCTCGCGGCCTCACGCGTGCTCCGAGCTCGGATGCGGGAAGCTGTTCTCTACTGTTACCAGTATGAAGGCGCATATTAATACCGAAGCACCAAAAGTCGAAGTCGTAGAAAACGAACCGACAAAACCTGATGTAAACGTCATGAATTGGGACAGTTTACTCGAATCTTTTGGAAAAATTACAACTGAGTCTAATTCAACAGACGGCAGCCTAGAAGATATTGCGAGTGTCAACCTTAACAACAACATGGATATTACCGAACTTTTATTTGATAACGCGACAAATAACACTAAATTTGACAATCCCGATTATGATTTGAGTAACCTAGAACTTTCGCCGTTCattgttaaaaatgaaaaagagcAAAACACGTGGAATGTTggcaataaaattgaaattaaatctaAGGCATTACAATTGGCGTTAGCAAATGAAGTAGAAGTACAGGCACCATGGATAGATGTCACGGCATTAGCGTCTTCCATACAAGAAACACCTGTTAGTATCAAAGATAATACACCAGAAAGTATTTTCACTCTAGCAACATCAGTACCAACACATATGCAAAGCTACATAGATCTTAATTCAGAAATACCTACCGCTAATATTATATCTGAGACATTTGATTTAGATACGCCTAACATACTTGATGTAAGTGACAAAGTTTTCAATGACAGTGAATTAGTAACAAATATAACGACTAAACTAACAGATGTAGAGTTTTTGAAAAACGACGAAATTAATGAGAACGATAGAACATTGAATACACCATCTCCtaaaatacaacataatatcgaaataaatccAGCTAACTCGGTGTTATTTAACACAGATTTGACTCTTGAAGACACATTGTTGTTTGATAATGAACCTCCATCAAATATGTATGTTGTTAAAACTGAGAAcatatttggtaagaaaatcaaaaatccATTAGAGCAATTAACATCGGATGCAGGAATTTGCTCGTGTAACAGTTGTAAATGTGACCCGAACAATGGTGAATGTAGAAATTGTAATCAAAAACAAACCTGTACAGATGATAAGTGTTCGTGTATTGACTGCAAATGCGATCACGCTCAAATGAAATGCGCAGTTGGATGCGGAAAAGCTACTGATACCAACCATAACACATTTTTACACTACCATAAAAGGCATAACGATTCAAATCTTGAAGATTTTGGTGTTTACACTCATGAATGTGATGATAACTTCccagaaattattaataatttaaaatgctcGTGTGATAGTAAAAGTAAGTGTGGTTCGAATAAAATGGAAGATGGTTCTACAAAGAAATCGTGCTGTGTGACAATTTGCTTTAAAAAAGTCGAAGCGTTCAAACAATTTCTGTCAGATACTGAACTGTTAAATGCTCTTAATGTAAATAACTTGAATCTGACAACAACATAA
Protein Sequence: MAVWLGDSGFSKIDTQNDLDSLLGDNFNLNCNIKCESSDRLSRDFPQITCDIKLLDSVTSEIKVVPKDKTTDCRIEIVSSNNERLPDAPQATVELPKSVMDKHKRKVEDNSARYKCEYEGCERTYSTVGNLRTHMKTHKGEYRFICPMQSCNKAFLTSYSLKIHVRAHTKVKPFTCNIGNCNRAFNTLYRLKAHQRLHSGDTFNCKADGCSKFFTTLSDLKKHIRTHTQERPYKCVTDGCGKSFTASHHLKAHARTHSGSRPHACSELGCGKLFSTVTSMKAHINTEAPKVEVVENEPTKPDVNVMNWDSLLESFGKITTESNSTDGSLEDIASVNLNNNMDITELLFDNATNNTKFDNPDYDLSNLELSPFIVKNEKEQNTWNVGNKIEIKSKALQLALANEVEVQAPWIDVTALASSIQETPVSIKDNTPESIFTLATSVPTHMQSYIDLNSEIPTANIISETFDLDTPNILDVSDKVFNDSELVTNITTKLTDVEFLKNDEINENDRTLNTPSPKIQHNIEINPANSVLFNTDLTLEDTLLFDNEPPSNMYVVKTENIFGKKIKNPLEQLTSDAGICSCNSCKCDPNNGECRNCNQKQTCTDDKCSCIDCKCDHAQMKCAVGCGKATDTNHNTFLHYHKRHNDSNLEDFGVYTHECDDNFPEIINNLKCSCDSKSKCGSNKMEDGSTKKSCCVTICFKKVEAFKQFLSDTELLNALNVNNLNLTTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00780594;
90% Identity: iTF_00213900;
80% Identity: -