Basic Information

Insect: Argynnis bischoffii
Gene Symbol: -
Assembly: GCA_033884665.1
Location: CM066625.1:13712154-13719221[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.16 14 7.1 2.1 1 23 255 277 255 277 0.96

2 24 0.46 39 5.6 0.2 6 23 289 307 289 307 0.95

3 24 1.1 91 4.5 0.1 3 23 318 339 316 339 0.93

4 24 3.2e-07 2.7e-05 25.0 0.3 2 23 364 385 364 385 0.97

5 24 5.4e-05 0.0046 18.0 2.0 1 23 392 415 392 415 0.96

6 24 0.00027 0.023 15.8 0.1 1 23 421 443 421 443 0.98

7 24 0.023 2 9.7 4.1 1 23 449 471 449 471 0.97

8 24 1.4 1.2e+02 4.1 1.5 1 13 477 489 477 491 0.86

9 24 0.047 4 8.8 3.5 1 23 586 608 586 608 0.96

10 24 0.00026 0.022 15.9 2.1 2 23 615 637 614 637 0.92

11 24 2.2e-06 0.00019 22.4 2.0 1 23 643 665 643 665 0.98

12 24 1.4e-06 0.00012 23.0 4.2 1 23 671 693 671 693 0.99

13 24 0.0012 0.1 13.7 2.1 1 23 699 721 699 721 0.96

14 24 3.6e-05 0.003 18.6 3.9 1 23 727 749 727 749 0.97

15 24 0.031 2.6 9.3 4.6 1 23 755 778 755 778 0.90

16 24 0.91 77 4.7 0.7 2 23 845 865 845 865 0.93

17 24 3.9e-05 0.0033 18.5 0.9 1 23 871 894 871 894 0.95

18 24 2.5e-05 0.0021 19.1 9.4 1 23 900 922 900 922 0.96

19 24 4e-05 0.0033 18.4 0.1 1 23 928 950 928 950 0.98

20 24 0.00032 0.027 15.6 0.9 1 23 956 978 956 978 0.98

21 24 0.002 0.17 13.0 0.4 5 23 987 1005 985 1005 0.96

22 24 0.016 1.3 10.2 2.3 1 22 1231 1252 1231 1252 0.97

23 24 0.0016 0.13 13.4 2.7 1 23 1259 1281 1259 1281 0.97

24 24 0.002 0.17 13.0 4.0 1 23 1287 1310 1287 1310 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.16	14	7.1	2.1	1	23	255	277	255	277	0.96
2	24	0.46	39	5.6	0.2	6	23	289	307	289	307	0.95
3	24	1.1	91	4.5	0.1	3	23	318	339	316	339	0.93
4	24	3.2e-07	2.7e-05	25.0	0.3	2	23	364	385	364	385	0.97
5	24	5.4e-05	0.0046	18.0	2.0	1	23	392	415	392	415	0.96
6	24	0.00027	0.023	15.8	0.1	1	23	421	443	421	443	0.98
7	24	0.023	2	9.7	4.1	1	23	449	471	449	471	0.97
8	24	1.4	1.2e+02	4.1	1.5	1	13	477	489	477	491	0.86
9	24	0.047	4	8.8	3.5	1	23	586	608	586	608	0.96
10	24	0.00026	0.022	15.9	2.1	2	23	615	637	614	637	0.92
11	24	2.2e-06	0.00019	22.4	2.0	1	23	643	665	643	665	0.98
12	24	1.4e-06	0.00012	23.0	4.2	1	23	671	693	671	693	0.99
13	24	0.0012	0.1	13.7	2.1	1	23	699	721	699	721	0.96
14	24	3.6e-05	0.003	18.6	3.9	1	23	727	749	727	749	0.97
15	24	0.031	2.6	9.3	4.6	1	23	755	778	755	778	0.90
16	24	0.91	77	4.7	0.7	2	23	845	865	845	865	0.93
17	24	3.9e-05	0.0033	18.5	0.9	1	23	871	894	871	894	0.95
18	24	2.5e-05	0.0021	19.1	9.4	1	23	900	922	900	922	0.96
19	24	4e-05	0.0033	18.4	0.1	1	23	928	950	928	950	0.98
20	24	0.00032	0.027	15.6	0.9	1	23	956	978	956	978	0.98
21	24	0.002	0.17	13.0	0.4	5	23	987	1005	985	1005	0.96
22	24	0.016	1.3	10.2	2.3	1	22	1231	1252	1231	1252	0.97
23	24	0.0016	0.13	13.4	2.7	1	23	1259	1281	1259	1281	0.97
24	24	0.002	0.17	13.0	4.0	1	23	1287	1310	1287	1310	0.97

Sequence Information

Coding Sequence: atgagTACCGTAATGTCACAACTAAACGTTAATCCTAGGCGTAATGGCGGCGGCCCCAGTCAAAGTTACCACAATATTGAtgatatcaaTGACCTATCGAAAATTTGCCGACTCTGCGGGATAGTTCCACCCGAGCCAGTTATTCAACTGTTCGGACAGGAATGTCGAAGAAACCAAATTtcagaaaaaataaatcaacatTTGTCTATACAGGTTGATGTAATGGACCGGCTACCAAAAACAGTGTGCCATAGCTGTATTGAACTTATTGTAGCATGGCACAAGTTTGCGAACCGCAGTGTAGAAGTTGaagcaaaattaaaacaaagatgCAATGAACAAAGACGATCGATGGAAACAAATGAACTAAATGCAACAGATTTAAATGAAAACGGAAACAATGAAGCTGTCGATACCTATACGTACACTGCGGATTCTTCATTTGGCACGTCACCAGACCCATATTCCCTTTACACCATTGTAAAAAACGTGTTGACTGACGATTACTTTAAGGCTTTGGACATTGACGAGGATAACTCCAATTTAGAGTACGTCTGCCAAATATGTCCCGGCAACCCCGCCTCCAAGTCTGTCGAATGTTTGTGCTCTCATATAAAGTCTTCACATTACTCCAAAACTACTGATCAACAGGCCATAGAAGAGTATATAAAGGAGAACATAACGTTTGAAGAAGTCCTCGGTGATGACATGGATGATGATCATGAACTTGAACGAGTAAAAGATGTGATAGAATTGCCTAATTTCTTTTGTCCTTTTTGTGACAATGCTTTTTCATCGCCAACTCGTCTTATATGTCACTTAAACAAACATATTGAGGTCAGTATCGAAGACGGAGTAACGTGTTGTGATAAACACTATCCAGATAAGAAAACCTTTGTCGCCCATTTGCAAGAAGCACACGTAAATAGACAAGTGACGGGAAAGGTAATATGCAAAAGCTGTGATTTTACAGCCAACGACGTCAATGAACTACAATCACACATAATCCAAGCACATCCAGAGAGCAAAGACGATTGCTACAAACCGAAGAAAGATCCGAGTTCAAAAAATCAGAAGTTCATACCAGCAGTCTGTCCCGAATGCGATAAAGTTTTctctaataaatataacatgctCGTTCACAtgagaaatcataataaatcaacCACCAAGTTCGCGTGTGACAAGTGTAGTAAGAGTTACAAAAGCCAAGGGAGCTTGTCTCATCATCAGAAGGTGGCTCATGAAGGGTTACTTCGGTTTCCTTGTCCGTACTGCGGGGAAGCGTTTCCTTCCAGGATGACTAGAAACATTCACACTCGCATTCACACCGGGTGTAAGCCATTCTCTTGCAAGTATTGCTGCAAGAGTTTCAGAGCAAAAAACAGCCTGGACCGGCACATCGACATGCACTTAGATGTACGAAAATACGCTTGCCAATTTTGTCCGAAGAAATTTAGAAAACACGATGAACCTCTCGCGAGCTTGGCAAATAGAAAGTCTTCTCGGGATTTGTATCAAGACTTCTATAATGCTTTGAAGAAATTTCGGGACCACTTCGTGAACGACCACCGCGGGCAGTGTAGCTATTCCGACTTCTCCGACTCTACTGAATCAGACCAAGAAGACTTAGAGAAGATGGATCTAAATGATTTCGATGACTTAACGGAAAGTAACATGAGAAAAGACAGAATGGACGAAGAAACTCGAGTCGAGCTCAGTGAAGTGCAGACTAAAATCAACGGCAAAGTGTATTTCACGTGTAAGATATGCGGAAAGAACCTGAGCTCGTCGCACACGTACATCTTCCACAAGCGCATCCACACCGGCGAGCGGCCCTGCGTGTGCCACGTGTGCGGGAAGCAGTTCCGGGTGCCCAACGGCCTGCAGCGGCACTTAACGGAAACACATTTGAAGCAACGGCGGTATATTTGCTTGGTCTGCCACAAGAATTTCGCCAATTCTCAGAACTTGAAACAGCATATGCGCATCCACACCGGCGAGAGACCCTACGTGTGCTCGCATTGCGGCAAGCGGTTCACGCAGAGCGGGTCTCTACACGTGCATTTGAAAACTCATACAGAAATCTTTCCTCACAACTGTGCGGATTGCGGCGCGAAGTTCAGGCTCCAGTCTAGTTGGAAACGACACAGATTAAAACACACGGGGGAGAGGCCACACGTGTGCGTTCATTGCGGGAAAGGGTTCCGACAGAAACATGAGCTCAACGGTCACATTCTGACCCACACGGACACCAAACCCCATGCCTGCTCGGTGTGCGGCGCCGCCTTCCGCCAGCGCCGCGCGCTGCGCCACCACTGCAAGCGCCTGCACGACGCCGACGCGAGGGACGTCATGATCTATAACAACATGCCGCACTACGACTTGTTCAGTAACGTGAAAAAAGAGATAAAATCCCAGACTGCAGATAGTCAAAATTTAGTTGTTAATAAAGATCACTCTGTAACAAAACATAAAGAGAATATAGGGAAACCACAGACTATTGTAGTAAAAGATGGCAAAAGATATGGAGtatgtaatatttgtaaaaaaaatgtgtttaccgCCTCTTGGAAACGTCATCTACAGTCGCACCAGAGCGTCAAAAGGTTCAGCTGCCACACCTGCGGGCTCGGCTTCAACGACAGCGGCAACCTCTCGCGGCACACGAAAGCCATACATTCCGAACACCGCCCTCACGCTTGCCATATTTGTCATAAAAAATTCTCTAGAAACAGCCACCTTCAAGATCATATAAAATCACATTCGGACACTAGAGAGTACATTTGCGACGTGTGCGGTAAAGCCTCCAAATCCAGCGCCGCTTTAAGAATGCACAGGAGAATACACGAGAACGACTATAGGTTTCAGTGCATGTACTGCGAGTCTAAATTCAAAAGGCGCGGGCAGCTGACGGCGCACGTGTCGGTGCACACCGGGGAGAGGGCGCACGTCTGCGTCTGCGGCAAGGCGTTCCGGCTGAGGAGCCAGCTCACGAGCCACGCGCGCCTCCACGACCAGTTTACATCGGCGCTGTTCAAGGCGCAGGTGTTCCGCGGCGCATTGAGCGAGTCGCGCACGTGCCTGCCGTGCCGCGCCGTCATCCCGCGGCAGGCCTACGCCGCGCACGTGTTCAGCTTGCACACGTTCATCCAGCTGCACTGCGACGAGTGCGACGTCTATATAGAAAAGCCAGATTACGTGGCCCACATGAGTCAGCACACATACGAAAAGGCCATGCAGAAGGAGAAACGGGCGAAAAGTATCACCAAGAAGATTCTGGACGTCAACCTCGCTTGGATAGTCCGAAATGAGTTCTGCAGTTGCGACAATCTCATGTGTAATTTTAATAGAGAATTAGGATTCAAAGTGTGTCCGACATATGAAGAGTACGACTTTGTAACGGAAACCATAGCTCGCCTGTTGGGCAAAACGCCGCAAACTATACGTGCCACGTTTGAAAACCATTACATTAATGAAAGCGGTCCGTCTCGCAGGATGAATGTGTTGTCACTGCCGAGCAATAACAGGAGTACGACATTGACTGGAAAACAACTAATAATTGAGCTCCGCCTAAATCATTTGCTCTCGATTCAAGAGCTCAAGAACCGCTGCCGCGAGTGCTGCAGGGTGTTCCTCACTAAGGAGAGCTTGTACCTGCACAGAGCCAGCCACATTGGCGAAAAAAACTACGAATGTAGCAGATGCTCCAAATCCTTCCGTTGGCACATACACTTAGAAAAACACGTGAGAACGCAGGAAGTCAATACTAAATTCGCATGTCCGACTTGCCAACGTGTTTTCAGACTCAAATGTGACATGTTGAAACACCGCCGCGTTCACAAGGTGAAGAAGAAATTTAAATGCACCAAATGCAATTTGAAATTTTCTGAAACTAGATATCTGAAGGTGCACATGACCAAGAAGCATAAAGGCGACAAGAAGAAGAAACCAGCACCGAAAAAAATACAGGCTTCCAAACGGAAACCTAAAACGCAAGTGCAGAAACCCAGGTCCTGTCGTAAGGGTACTAACCCCTGTACTAAGGCTACAAATATGGAAGTTGATATGTGTCAATATATTGCTGTTGGAGGATTCGGCAAAGTAAGCTTGCCTCATCGCATAAGGTACCAGTATGAAAAGGCCCAACGAGGTCTCATTCTGCAGGAGGCTCAATGCCATGTCTGA
Protein Sequence: MSTVMSQLNVNPRRNGGGPSQSYHNIDDINDLSKICRLCGIVPPEPVIQLFGQECRRNQISEKINQHLSIQVDVMDRLPKTVCHSCIELIVAWHKFANRSVEVEAKLKQRCNEQRRSMETNELNATDLNENGNNEAVDTYTYTADSSFGTSPDPYSLYTIVKNVLTDDYFKALDIDEDNSNLEYVCQICPGNPASKSVECLCSHIKSSHYSKTTDQQAIEEYIKENITFEEVLGDDMDDDHELERVKDVIELPNFFCPFCDNAFSSPTRLICHLNKHIEVSIEDGVTCCDKHYPDKKTFVAHLQEAHVNRQVTGKVICKSCDFTANDVNELQSHIIQAHPESKDDCYKPKKDPSSKNQKFIPAVCPECDKVFSNKYNMLVHMRNHNKSTTKFACDKCSKSYKSQGSLSHHQKVAHEGLLRFPCPYCGEAFPSRMTRNIHTRIHTGCKPFSCKYCCKSFRAKNSLDRHIDMHLDVRKYACQFCPKKFRKHDEPLASLANRKSSRDLYQDFYNALKKFRDHFVNDHRGQCSYSDFSDSTESDQEDLEKMDLNDFDDLTESNMRKDRMDEETRVELSEVQTKINGKVYFTCKICGKNLSSSHTYIFHKRIHTGERPCVCHVCGKQFRVPNGLQRHLTETHLKQRRYICLVCHKNFANSQNLKQHMRIHTGERPYVCSHCGKRFTQSGSLHVHLKTHTEIFPHNCADCGAKFRLQSSWKRHRLKHTGERPHVCVHCGKGFRQKHELNGHILTHTDTKPHACSVCGAAFRQRRALRHHCKRLHDADARDVMIYNNMPHYDLFSNVKKEIKSQTADSQNLVVNKDHSVTKHKENIGKPQTIVVKDGKRYGVCNICKKNVFTASWKRHLQSHQSVKRFSCHTCGLGFNDSGNLSRHTKAIHSEHRPHACHICHKKFSRNSHLQDHIKSHSDTREYICDVCGKASKSSAALRMHRRIHENDYRFQCMYCESKFKRRGQLTAHVSVHTGERAHVCVCGKAFRLRSQLTSHARLHDQFTSALFKAQVFRGALSESRTCLPCRAVIPRQAYAAHVFSLHTFIQLHCDECDVYIEKPDYVAHMSQHTYEKAMQKEKRAKSITKKILDVNLAWIVRNEFCSCDNLMCNFNRELGFKVCPTYEEYDFVTETIARLLGKTPQTIRATFENHYINESGPSRRMNVLSLPSNNRSTTLTGKQLIIELRLNHLLSIQELKNRCRECCRVFLTKESLYLHRASHIGEKNYECSRCSKSFRWHIHLEKHVRTQEVNTKFACPTCQRVFRLKCDMLKHRRVHKVKKKFKCTKCNLKFSETRYLKVHMTKKHKGDKKKKPAPKKIQASKRKPKTQVQKPRSCRKGTNPCTKATNMEVDMCQYIAVGGFGKVSLPHRIRYQYEKAQRGLILQEAQCHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -