Apag006242.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Arge pagana
Gene Symbol
nfxl1
Assembly
GCA_963969455.1
Location
OZ018310.1:5514491-5517196[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 1.1 9.3e+03 -3.2 1.1 15 19 126 130 125 130 0.81
2 21 0.34 3e+03 -1.7 3.0 4 10 161 167 158 167 0.87
3 21 3.9e-08 0.00035 20.5 17.2 1 19 175 192 175 192 0.99
4 21 2.1e-08 0.00018 21.4 15.2 1 19 228 246 228 246 0.98
5 21 2 1.8e+04 -4.9 1.9 10 14 253 257 252 257 0.70
6 21 0.6 5.3e+03 -2.4 1.0 5 10 270 275 270 275 0.90
7 21 0.00069 6.1 7.0 9.9 3 18 283 299 281 300 0.91
8 21 1.7 1.5e+04 -3.9 0.7 6 10 325 329 324 331 0.58
9 21 2.2e-05 0.2 11.7 8.2 1 18 335 352 335 353 0.96
10 21 1.1 9.3e+03 -3.2 0.7 1 4 362 365 362 366 0.88
11 21 0.0034 30 4.7 8.0 1 12 387 398 387 398 0.94
12 21 0.46 4.1e+03 -2.1 1.0 6 10 408 412 407 412 0.92
13 21 5.9e-08 0.00052 19.9 13.7 1 19 418 436 418 436 0.93
14 21 0.00012 1 9.4 10.0 9 19 484 494 482 494 0.90
15 21 0.0036 32 4.7 6.3 1 12 503 513 503 513 0.95
16 21 1.2 1e+04 -3.4 6.7 14 19 542 547 542 547 0.90
17 21 2 1.8e+04 -4.6 3.7 6 10 573 577 572 579 0.84
18 21 7.4e-05 0.65 10.1 5.8 1 11 583 593 583 594 0.94
19 21 0.00011 0.95 9.5 14.9 3 19 623 639 622 639 0.92
20 21 2 1.8e+04 -6.5 3.4 9 13 645 649 645 649 0.71
21 21 0.00048 4.2 7.5 11.8 1 16 684 698 684 704 0.87

Sequence Information

Coding Sequence
atgagaaaattcaaGAGGATACAAGCACAAAATCAGGCAACAATCGAAAGGCATATAGAAGCAAATTCTTTCATAGAATCATCAagcgacgaagaagatgaaacAGGGCAGGAAGTATTACACAAAGCTGTTGGAAATATCCTTACGTCGTACCAGGATCAAGGTGGTGATCCAGAAAAAGTTCTGTCATATTTGTCTGATACATTCCAATCTAACGGAGCTGTATGTTTGATATGTATTTCTTCGGTGAAGAAAACGGATGCGATTTGGAGTTGTGAAAGATGCTTCTCGTTCATGCACTTACCTTGTATACAACACTGGGTACGGGATAGCTTAACTTATAAACGTGAGCGAGGTACATCACAATTATGGGCATGTCCAAAATGTCGGACAGAGTACGAAGAAGATCAGTCGCCGCAACATTACACTTGTTTTTGTGGAAAGACAAGAGATCCACCTTATCAACCATGGTGTGTTCCCCATTCTTGTGGTGAACCGTGCCAAAAACCACTGCAACCAGAATGCGGTCATACGTGCGTTTTACTTTGTCATCCTGGACCATGTCCACCTTGTCCAAAAATGATTGCTTCGAAATGCTTTTGTGGAAAACAGCCTCCCCGCCAACGACGATGTAATGCGAAATTATGGAGCTGTGGCGCTGCTTGCGGAAAATTACTACAATGTTCTAAGCATAAGTGTCAAGAAAAATGTCATCCCGGAGACTGTCCCTTATGTCCAGAAAAAGTTTCTATGTCGTGTCATTGTGGAAATCTAACAGAACTACGGATGTGTTGGGACAAGTCATGGCGTTGCAACAAACCATGTAAAAAATCTTTATCTTGTAAAGTTCACGTATGCGAAGGTGTTTGTCACTTACCTGGAGATTGCGGAGATTGTCTAACAGCTGAAAATAGAACGTGTCCATGTGGCAAGAGAAAATACGCGATTTCTTGTAAACAGGACGCTCCGACTTGTGGAGATACTTGCGAAAAATTACTAAACTGCGGTTCGCACTATTGCAATAAACGTTGCCACTTCGATAGCTGTGGGCAATGCTTGGAAGTGGTTAATAAATTTTGCAGATGCGGCACCCATCAGAAAGAAATCGCTTGTGCTAAGGTATTCAGCTGCGACACTAAATGTAAGCAAATCCGATTATGTGGTCGACATCCATGCAACAAAAAGTGTTGCgattgcataaaaaaaaataatttcaacgctTGTGAAAAGGTTTGTGATCGGACGTTGAGCTGTAGAAAGCATAAATGTCCTGCTCTGTGTCATAGTGGCCCTTGTTATCCTTGTCCTCGCACAGACGTTATTCAATGTCGATGTGGTTCAAGCAAAATTATTATACCATGCGGCACAGCTAGAAAAATTAAACCGCCACATTGTAATAAAATGTGTAAGATTCCACCAATTTGTCATCATCCAAAGCGAGAATCACATAAATGTCATCAAGGACCTTGCCCACCATGTAAAAAACAATGTGCTTTGACACTCAAATGTGGTCATGTATGTCCAGCCCCTTGTCATACTAAGGTTTGGGTCAAAGTCAATGGGGTCACTCAACCAGCAGGACCctgggaaaaacaaaaagagaaaatgCAATTGAAAACATTGCCTTGTCCACCCTGTCAAGTTTCTGTGATGGTAACATGCTTGGGTGGCCATGAAACGTTACCATGGCCATGTTACAAAGCTATTCCAAGCTGTTGTCAAAGACCATGCGGTCAACAATTGACCTGCACAAATCACACCTGCAATCGGTTGTGTCATGTAGTGAATGCTTCTGGAGATAACACAGAAGCGAAGAATTGTGAAGAATGTGTGGAGCCATGTTCGTTACAGAGACCTAAGAATTGTACACACAATTGTCCCAGTGTCTGCCATCCAGCACCATGTAGGCCTTGTAAGCAGCTTATACGGTTGCCCTGTCACTGTGGTCTTAATTCACTATATCTACGATGCGCCGAATTGACGAGTGCTACTGAGGCTGATAAATTGGAAATGTTCAAATGTGGCAATCAGTGCCCTAAAAACTATTCATGCGGACACCGATGCGTTGAAGATTGCCATCCAGGATTGTGCACAGGTGCAGAAGAATGTCGTAAAAAAGTGAAAGTCTGGTGCAAATGTAAACGTTTGAAAAAGGATTTTCCTTGTCTGACTGTACGTTTGGGCAATGGTACCGTTTTATGCGACGAAATTtgcgatgagaagaaaaaacagcgaaTCGCAGCTCAGCAGCTTGAAATAGCAGAGAAGAAAAGGCAGGAAGAACTACAAAACCAAAAAGAAGTGGAGAAATTTGAACGAAAGTTCAAACCTAAACGTAAACGTAATGACAAATTTAACAATGACTTACCGATCAAGGACAGTAGTTTCAATCGCTTGAAACTGTTTGTAACAGCGCTGTTAATAGTAATCACTGGCTGCATGATTGTATTCTTCAATATCTCAACCTGA
Protein Sequence
MRKFKRIQAQNQATIERHIEANSFIESSSDEEDETGQEVLHKAVGNILTSYQDQGGDPEKVLSYLSDTFQSNGAVCLICISSVKKTDAIWSCERCFSFMHLPCIQHWVRDSLTYKRERGTSQLWACPKCRTEYEEDQSPQHYTCFCGKTRDPPYQPWCVPHSCGEPCQKPLQPECGHTCVLLCHPGPCPPCPKMIASKCFCGKQPPRQRRCNAKLWSCGAACGKLLQCSKHKCQEKCHPGDCPLCPEKVSMSCHCGNLTELRMCWDKSWRCNKPCKKSLSCKVHVCEGVCHLPGDCGDCLTAENRTCPCGKRKYAISCKQDAPTCGDTCEKLLNCGSHYCNKRCHFDSCGQCLEVVNKFCRCGTHQKEIACAKVFSCDTKCKQIRLCGRHPCNKKCCDCIKKNNFNACEKVCDRTLSCRKHKCPALCHSGPCYPCPRTDVIQCRCGSSKIIIPCGTARKIKPPHCNKMCKIPPICHHPKRESHKCHQGPCPPCKKQCALTLKCGHVCPAPCHTKVWVKVNGVTQPAGPWEKQKEKMQLKTLPCPPCQVSVMVTCLGGHETLPWPCYKAIPSCCQRPCGQQLTCTNHTCNRLCHVVNASGDNTEAKNCEECVEPCSLQRPKNCTHNCPSVCHPAPCRPCKQLIRLPCHCGLNSLYLRCAELTSATEADKLEMFKCGNQCPKNYSCGHRCVEDCHPGLCTGAEECRKKVKVWCKCKRLKKDFPCLTVRLGNGTVLCDEICDEKKKQRIAAQQLEIAEKKRQEELQNQKEVEKFERKFKPKRKRNDKFNNDLPIKDSSFNRLKLFVTALLIVITGCMIVFFNIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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