Apag004506.1
Basic Information
- Insect
- Arge pagana
- Gene Symbol
- pnr
- Assembly
- GCA_963969455.1
- Location
- OZ018309.1:12791629-12798389[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4 1.2e+04 -4.0 0.1 8 12 239 243 237 246 0.81 2 2 1.1e-16 2.4e-13 49.4 5.1 1 35 414 447 414 448 0.98
Sequence Information
- Coding Sequence
- ATGTTTAATATACCGCCAAAATTTTACGAGCTGTGTCGCCTTTGTTTATCGTCGGACGGTGTAAAATTATCCATTTTTGACGAAGAGGGCACGCAGCGTAACTTCGCTGACAAGATTCTTACGTGTCTCTCAATCGCGGTAAACGATGGAGATTCTCTACCACCCATTATATGTCATCGCTGTGTTTACAAATTGGATGTTTTACACAATTTCCGTGAAGTTTCTCGCAAGTCTGATATTATCCTAAAACAATATTTGGATTATGCGATGCAATTGTCTAACGGAGACCAGGAAAAATCTTTCTCCACTGCCAAACTAGCTGATTTAAGTCCGTTGCAGTCATTTCTACAACTCAACAAAACCCTGTTCAATGAAAAGCCAAACTCTCCGCCAAGTATTGAAAACGTTACTCGTCCAACCCAGACTCACCATTTAGAATTACGAACAAAAGAATTACCAGAACAGGATTCCGTTAAGTGTGAGCCAGAGGATGACACGTGTTCAAACAGCTCGGATCCAGAACGATTGGAGATCGAGGATCGCGACGAGCATGAATCAGATGGAGAAGAAAATGGCTACGACATGACAGTTAATAAGAGGACCAAATTGGATACGGGGTATGAGAGTTCAAAACAAAGTACACCTAATCGAAGTCCCGTAAATAGAATGGATACTCCAGAGAGTAATTGTTCGGATGTGCATATTGACCAAGAGACTACCAAACTCTGGCAAGCACTTGCCAATAACAGAAGTCTGGAGATCACAAAAACCAATGGTGATAAATTGAACAATGGATTCAGCGGCGAAGCAACAAATTTGTTGCGCTCTCTAATCAACAATAGGCAAATTGGAATCACAGCGATTGATGCAGGAAGAATATCACCCCAGATCAGATTCTACAGGGATACCCAAGGGACAACGATCGAAAGGACCATGCCAGATTGCCCTGTACTTGGAAACCGTACAAATTTATCATGTATAGATAACAAGAGTGCTTCCATGGATAGTAATCCTTCCAGTCCTGCCAGTGTGGGAAGAAAGGAAActaaaggaagaagaaaacagAGCTATCCTAGCAAAGCTCCATCCAGTCCTGATGTTATCAATTATCAACATGAATCTAACGAGGAACAAGCGCAGGATTTCACAGCCTGGTCTAACAAGATGAAAGCGAAGATGGGGGAACAAAAACAGTTTGATCAACACGgtggaaacgcgacgaaaaaggTTGATATGTCGTGTACGAACTGCGGTACGATGACGACAACAATTTGGAGACGAAATATGAAAGGCGAAATGGTTTGTAATGCTTGCGGGCTATATTACAAACTTCACGGAGTTAATCGTCCAGTTACAATGCGAAGGGACACAATTCACACGCGGAGACGCAGGCCTAAAGGAGAAAAACCTACTCGGCATAGAAaaaaaggagaaactGTATCATTGCAACCTGAACAAATGGATTCAGAAAGTGTAGATATGCTAGCTGCGTTACGCAGACAGATTCAACCACACCTTATGATGGCAACGCTGACTCCTTCTCGTATACCTGGATCTCATCTCCCTGCTTCTACTACTCAGCTCAACTATGCGCTTCCACTTCCCAGTTACATGATGCACCATTTACAAAACGAAGCAAGAGAACACCAGCATAATAATGGAGATGAAGTCGAAGAAGGAGACGAAGGAAATGTTTCGGATGTACCGTTGAACCTGGTTGCTACATCATTATCGGTAGATGCCCAGTga
- Protein Sequence
- MFNIPPKFYELCRLCLSSDGVKLSIFDEEGTQRNFADKILTCLSIAVNDGDSLPPIICHRCVYKLDVLHNFREVSRKSDIILKQYLDYAMQLSNGDQEKSFSTAKLADLSPLQSFLQLNKTLFNEKPNSPPSIENVTRPTQTHHLELRTKELPEQDSVKCEPEDDTCSNSSDPERLEIEDRDEHESDGEENGYDMTVNKRTKLDTGYESSKQSTPNRSPVNRMDTPESNCSDVHIDQETTKLWQALANNRSLEITKTNGDKLNNGFSGEATNLLRSLINNRQIGITAIDAGRISPQIRFYRDTQGTTIERTMPDCPVLGNRTNLSCIDNKSASMDSNPSSPASVGRKETKGRRKQSYPSKAPSSPDVINYQHESNEEQAQDFTAWSNKMKAKMGEQKQFDQHGGNATKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKPTRHRKKGETVSLQPEQMDSESVDMLAALRRQIQPHLMMATLTPSRIPGSHLPASTTQLNYALPLPSYMMHHLQNEAREHQHNNGDEVEEGDEGNVSDVPLNLVATSLSVDAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01538418;
- 90% Identity
- -
- 80% Identity
- -