Basic Information

Insect: Arge pagana
Gene Symbol: -
Assembly: GCA_963969455.1
Location: OZ018310.1:19691961-19697018[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00021 0.016 15.6 0.6 2 23 453 474 453 474 0.97

2 14 1.6e-05 0.0012 19.1 0.8 2 22 507 527 506 530 0.90

3 14 0.0053 0.4 11.2 0.9 2 23 538 559 537 559 0.97

4 14 0.12 9.4 6.9 1.6 3 20 665 682 663 684 0.94

5 14 0.1 7.5 7.2 1.1 1 21 794 814 794 815 0.92

6 14 0.0012 0.091 13.2 0.1 2 23 840 861 839 861 0.96

7 14 4.9 3.7e+02 1.9 1.1 1 15 883 897 883 905 0.76

8 14 0.21 16 6.2 0.1 1 23 912 934 912 934 0.97

9 14 1.5 1.2e+02 3.5 2.6 1 23 953 975 953 975 0.94

10 14 0.0021 0.16 12.5 5.4 1 20 1314 1333 1314 1335 0.94

11 14 0.9 67 4.2 0.0 1 23 1352 1375 1352 1375 0.94

12 14 0.11 8 7.1 1.9 1 23 1501 1525 1501 1525 0.96

13 14 5.1 3.8e+02 1.8 4.1 1 23 1622 1645 1622 1645 0.96

14 14 2.7 2.1e+02 2.7 2.2 1 23 1658 1681 1658 1681 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00021	0.016	15.6	0.6	2	23	453	474	453	474	0.97
2	14	1.6e-05	0.0012	19.1	0.8	2	22	507	527	506	530	0.90
3	14	0.0053	0.4	11.2	0.9	2	23	538	559	537	559	0.97
4	14	0.12	9.4	6.9	1.6	3	20	665	682	663	684	0.94
5	14	0.1	7.5	7.2	1.1	1	21	794	814	794	815	0.92
6	14	0.0012	0.091	13.2	0.1	2	23	840	861	839	861	0.96
7	14	4.9	3.7e+02	1.9	1.1	1	15	883	897	883	905	0.76
8	14	0.21	16	6.2	0.1	1	23	912	934	912	934	0.97
9	14	1.5	1.2e+02	3.5	2.6	1	23	953	975	953	975	0.94
10	14	0.0021	0.16	12.5	5.4	1	20	1314	1333	1314	1335	0.94
11	14	0.9	67	4.2	0.0	1	23	1352	1375	1352	1375	0.94
12	14	0.11	8	7.1	1.9	1	23	1501	1525	1501	1525	0.96
13	14	5.1	3.8e+02	1.8	4.1	1	23	1622	1645	1622	1645	0.96
14	14	2.7	2.1e+02	2.7	2.2	1	23	1658	1681	1658	1681	0.95

Sequence Information

Coding Sequence: ATGCATGGCTCAGCCGTGGACAAATTATGTCAAAATGTAAAATCTAACTTTAGTCATCTAAGAATGGACAAAACCAAAGGATTCATAAATTCATCCTTAAACCTAACTTCCAAAACTGAAAAGGACAATGTTTTCACAAACTCTAGtcgaaaaaagagaaatcaaaaaaatgccATAATTCAATTTTGTAAAACACCTGAAGATCCTGTGAGCTCGTCCAGTCAAGATTCTGCGACGAATGAAACAGCCCCAATTGAATCAGCGTACAATGAAAAAAGCGCTGCTACAAATAACCACAGGCATCGTCATTCTCTTGAAGATTCTGCTGTTAGGAATTTGCAATCTGATGATTTGGGAACATTAGCACAAATTCGATCTAACCTACTCTCTAAAGCCTTGGCGCGGGTTAAGAGTGAACTTGATAGTGGAAAATCTCTTGATGAAATAAGACTTGTCCCTGATGAGATCGCCTCTCCAAATTTCCGACTTTCAACAAATGATGAAAGGGTGAACAGCACCATGGATCAATCTCAAAGGAGGTCATCAACAAGGCCCAAGCTATCGGTTGCTCGGCTTTGTTGTAAAACTGTGAATGATATTGAGTCAACAGTTACAGATTTTTCCAAGAATATAGAGAGTTGCGAAACGTCAAAGATTCAGACCACTCCAAAAAAAGGTTCGAACGTCGTTCAAAGACTCGAAATTCAGTCAAACGAGGAATGTATCATTGCTAAAAAGCATATGTTCACTTCAGAAACCGAACGGATAGACGAAGTCTTGAGTTCAGATGATGTTACAATTGCACAGAAGTCTGTTGAACCATCAAAAGACACCAATATTCCTTCAAGCGAAAGTTACAGCAGaaaaagtgttgaaaaatctATCGAGGAAATTCGCTCTATCATAGGCGTCACTCCAAAAAGTAGGACGACTCCATCATTATCTGCTGAAGAATCATCCCATAGTACAAACAAAGAGATCAATCAACTAAATGTGATAGATAAATTAAAACATCTCTTATCACAAGCATGTCCAGACCACAGGGACAAATTTTCTGCAGATGTTGGAACCAAGATGTCGACAGAACTACAAATTGAACCTGCGGATTCTACATCAACAATAGATCTACCAATGGCATCTGATATTCCAATCTCTCCGAAAAGCTTACCAGTTGTCGAACCTATGGTCAATCCAGATAAGTCCAAAGACACGGTGTCCGAATCTAATGTTTTGGAAGAGCCATGCTTACCAATGTCTCAGCAAAATAGATCTCCCATGACCGATGAGCGCGTCGCCGACTCCGTAGATGCCGATTTCAATAGAGAGAATGAGAAGAACGGCATAAtttacaaaagaaaatgttcaatatgCGATCAGTTATTTACATCGCCTGGGATGTTGAAAAAACACTTGTCAAATCATTTCAAAGACGAGGAGCTCCAGCAGTGCACCATCTGCGATCAACCACTCAAAAATTCAATCGTTCACCATTACTTCAAACATTGTACTTTGATCGTGGTCTGTCCTACATGTAACAAGGTTTTCAAGCATAAAGGACTCCTGAGGCTACACATGATAAGTGAGAAACATGGACGCGATTTGAAAAGATGGAAATGTGATGTTTGCTCGATGACTTGTGATTCGAAGGAAGATTTATTCTTACACGTCTTGACTCATTCTACGACCGATTTGCAAGATGCCTACCAAGCAAAAACTAACCAACAATCACAAGatgggaagaagaaaaatgaaaataccaaAACTGACCTCCAGAAAGAAGGAGACATTGATGTTGATGAGGCAACGTCTCATATTGTGGTTCAGGAAAAGACGAAAACATCTGTCGAACTCGCGTCATGTGAACCTGATATAGAGACATTGAACGGATCAACGTCGTCGCGAAAATCTACAGAGAGGATGGTCATATGCCCTTGCCACAGCAACCACCAACCAGAAATTTCATCTGGCATAATAATAGAAATTGCGACGGCTTGCCAACAGTGCAACATGCTGTTTAAGACGAACGAATGCTTTAAGAAACATCTGGCGGAAAACAAAACCTGTTACGAAAACcttgaaaacaaaacaagTGCCAAAATTTACTGCGGCAGTTGTTGCCTAGTATTGCATTCGTTGCAGGAAATGCACAGTCATTTGGAATCCCACAcacaaaaacaaatgaaagtcTTCGTATTATGCAAACTTTGTCGAGTTATGTTTTATGGAATGGGACCCATGTTTTACACTCATTGGTTCAATCACTGTAAAGATTCCAAGTATTGCGCTGATCCTGATTCTTTCCCTGAGCATATGAAAGTCGCCGTTTTCAATATAAATTCAGTGAACAAGATACTCACCCAAAATATATTCATCGCTGATCACGTGTGCACCTTGTGCAAAAGCCCATTCTATAGTGAACAAGAACTCAAGAAGCATTCCAACACGGATACCAAAACGTGTGCCGGCAGTAGTTTGGAACTTTCAGTGAAAGAACGATACAGACAGTCCTTTAAGCTGATGTGTAGTATTTGCAATGAAGAATTTTCAGCCAAGTCATTGCTCGACGATCATGTCAGGAGTCACGAAACAGTGGGAGATCTTTTACAAGTACCGGAGTATTATGTTGATCATACAAGCGGTAATCGTTTTGTTTGTAAGATCTGCAAAACCACTCTGAACTCTGCTGCAGAGTGCGATGACCATTCCCTGAAACACAAGGTAATCCAAGAGAAGTTCGTCTGTGGTATTTGCATTGTCATGTTTGATAATATGGATGACTTTGAAAACCACTTATCAAGCCACAAGAAATCGCTGAAGAAACTGATCAGCTGCCAGATCGTCTTTGCGACTTGTAAATAttactgtaaaaaatgtaagctTCTATTCCAAGACGGTGACTCCTTGCACCAACACTCTATGGATCACGCTAAATCACTCTTGCCAATCGACACGTGGAACCAACAGACCGTAGTACCATCAAGCAATGATGAAAGCTCAACTTGTAAAACCTCAGTGATAAACGAAATTCATCGTGGTCAGGTACCGGAGACAGCGGCTAAGTGTTCTAGGGTTGAAACACAGATCAATGACAAAGTTGATGAGGTTGAAATTCATCGTGGTCAGGTACCGGAGACAGCGGCTAAGTGTTCTAGGGTTGAAACACAGATCAATGACAAAGTTGATGAGGTTGTTGAAATTCATCGTGGTCAGGTGCCGGAGACAGTGGCTAAGTGTTCCAGGGTTGAAACACAGATCAATGACAAAGTTGATGAGGTTGTTGAAATTCATCGTGGTCAGGTACCGGAGACAGTGGCTAAGTGTCCTAAGGTTCAAACGCAGATCAATGACAAAGTTGATGAGGTTATTGAAATTCATTGTGGGCAGGAACCGGAGACAGTGGCTAAGTGTTCTATGGTTGAAACAATGATTAATAACAAAGTTGATGAGGTTGATGAAATTCATCGTGGTCAGGTACCGGAGACAGTGGCTAAGTGTTCTAGGGTTGAAACGCAGATCAATGACAAAGTTGATGAGGTTGTTGAAATTAAAAGTGGTCAGGTACCGGAGACAGTGGCTCAGTGTTCTAGGGTTGAAACACAGATCAATGACAAACTTGATGAGGTTGTTGAAATTCATCGTGCTCAGGTACCGGAGACAGTGGCTAAGTGTTCTAGGGTTGAAACGCAGATCAATGACAAAGTTGATGAGGTTGTTGAAATTAAAAGTGGTCAGGTACCGGAGACAGTGGCTAAGTGTTCTAGTGTTGAAACACAGATCGATAACAAATTTGATGAGGTTGTCGATAAATCGGTTAAAAACTCTGAGCAAGCCGATTGTGATGTGAATGACGCTACTCGACAGTCACCTGCAAATGAGCGAGCTGTGCCGAAACCTTCGTTtcttcgagtgaaaaaattgtccgatCTGATAGAACAAAAGCACGAATGTAACATTTGCaaaacgaaattttccacCCAATATTTGCTAACACATCACAGATGCGATCAGCGTGGGTCGGTGCCAGAAATCGTCAGCAAGCCGGCCAAAGAAATATTTATCTGTCAAGTATGCGGTATGTATGAAACAACGGATCCATTGCAGCTGCGAATTCACGTGATGTTGCATTTTCCCCTGGATGCTTATCCCAAACTGAACGAGTGTTGGTACTCCGCGTGGCGAATTTCAACAGGTAAACATCACCTGAAATGCAAGCTTTGTCAAAATTTTCAGACCCCGTCAATTGCTGTTTTGCAAGAACATTTCCTTGTCGTTCATGCCACGATTTATCAGCCTATGTTCAAGTGTCGGATGTGTCGTGACTTTATGACGTTTGACTCTCATAAAATCCAACTACACGAGCGAACTCATTTCGTCTCATCGAGCGACGACGAGCTaccaaattttattcgcaacAACGTGAAGATACTTTCATCAAGGCCTGGTACGCTGACATCTCAGACCCAGGCTACATCCTTACCTATACCGAAACTCGGTCTCATCTATCGTTGTCCGATATGTAACAATTTCGAATGCACTTCCGAACAACAACTTCAAGCTCATTATTCGACCCAGCATTCCAATGATGTTTCGAGAATTAAACTCACCAGTGAATCATCGCAAAATCGGACACCTTCCAGTGGCAGTTGTTCATCTGAAAATCAGCAGCCGCGGCTGGCACAGATGGTGCCTCACCAGTCAGCGTTAGGTGTGCTCAAACAAAATGGGACGCCAACTGTGACAGTGCAAGTTATAAACAAACCGTCAATAAGGGCCGATGTGATTTCGATCCCACGCCTACCAAAACCAACTGTTTCCATCAATCAGCAACGTTGGAGATTGATACCAGATCAGAACCTCTACCCATACTCCTGCAGTCTCTGCTTTTGCCGTTTCCTTCACGAAGCTGAGTTTTTGCAACACCAACGAGAAGTACATCCACCGGCTGGAATCACGACCAATACGTCAAACATGTTTCAGTGTGACCTTTGCAATTTGTGCTCTATGTCAGTGGACCAATTGCAATTCCATAAAAGAGTACAACACGGTTTATGGTATTGA
Protein Sequence: MHGSAVDKLCQNVKSNFSHLRMDKTKGFINSSLNLTSKTEKDNVFTNSSRKKRNQKNAIIQFCKTPEDPVSSSSQDSATNETAPIESAYNEKSAATNNHRHRHSLEDSAVRNLQSDDLGTLAQIRSNLLSKALARVKSELDSGKSLDEIRLVPDEIASPNFRLSTNDERVNSTMDQSQRRSSTRPKLSVARLCCKTVNDIESTVTDFSKNIESCETSKIQTTPKKGSNVVQRLEIQSNEECIIAKKHMFTSETERIDEVLSSDDVTIAQKSVEPSKDTNIPSSESYSRKSVEKSIEEIRSIIGVTPKSRTTPSLSAEESSHSTNKEINQLNVIDKLKHLLSQACPDHRDKFSADVGTKMSTELQIEPADSTSTIDLPMASDIPISPKSLPVVEPMVNPDKSKDTVSESNVLEEPCLPMSQQNRSPMTDERVADSVDADFNRENEKNGIIYKRKCSICDQLFTSPGMLKKHLSNHFKDEELQQCTICDQPLKNSIVHHYFKHCTLIVVCPTCNKVFKHKGLLRLHMISEKHGRDLKRWKCDVCSMTCDSKEDLFLHVLTHSTTDLQDAYQAKTNQQSQDGKKKNENTKTDLQKEGDIDVDEATSHIVVQEKTKTSVELASCEPDIETLNGSTSSRKSTERMVICPCHSNHQPEISSGIIIEIATACQQCNMLFKTNECFKKHLAENKTCYENLENKTSAKIYCGSCCLVLHSLQEMHSHLESHTQKQMKVFVLCKLCRVMFYGMGPMFYTHWFNHCKDSKYCADPDSFPEHMKVAVFNINSVNKILTQNIFIADHVCTLCKSPFYSEQELKKHSNTDTKTCAGSSLELSVKERYRQSFKLMCSICNEEFSAKSLLDDHVRSHETVGDLLQVPEYYVDHTSGNRFVCKICKTTLNSAAECDDHSLKHKVIQEKFVCGICIVMFDNMDDFENHLSSHKKSLKKLISCQIVFATCKYYCKKCKLLFQDGDSLHQHSMDHAKSLLPIDTWNQQTVVPSSNDESSTCKTSVINEIHRGQVPETAAKCSRVETQINDKVDEVEIHRGQVPETAAKCSRVETQINDKVDEVVEIHRGQVPETVAKCSRVETQINDKVDEVVEIHRGQVPETVAKCPKVQTQINDKVDEVIEIHCGQEPETVAKCSMVETMINNKVDEVDEIHRGQVPETVAKCSRVETQINDKVDEVVEIKSGQVPETVAQCSRVETQINDKLDEVVEIHRAQVPETVAKCSRVETQINDKVDEVVEIKSGQVPETVAKCSSVETQIDNKFDEVVDKSVKNSEQADCDVNDATRQSPANERAVPKPSFLRVKKLSDLIEQKHECNICKTKFSTQYLLTHHRCDQRGSVPEIVSKPAKEIFICQVCGMYETTDPLQLRIHVMLHFPLDAYPKLNECWYSAWRISTGKHHLKCKLCQNFQTPSIAVLQEHFLVVHATIYQPMFKCRMCRDFMTFDSHKIQLHERTHFVSSSDDELPNFIRNNVKILSSRPGTLTSQTQATSLPIPKLGLIYRCPICNNFECTSEQQLQAHYSTQHSNDVSRIKLTSESSQNRTPSSGSCSSENQQPRLAQMVPHQSALGVLKQNGTPTVTVQVINKPSIRADVISIPRLPKPTVSINQQRWRLIPDQNLYPYSCSLCFCRFLHEAEFLQHQREVHPPAGITTNTSNMFQCDLCNLCSMSVDQLQFHKRVQHGLWY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -