Basic Information

Insect: Arge pagana
Gene Symbol: Glis3
Assembly: GCA_963969455.1
Location: OZ018311.1:6818479-6822285[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00015 0.011 16.1 0.3 1 23 313 338 313 338 0.97

2 5 0.41 31 5.3 0.1 5 23 380 400 374 400 0.80

3 5 1.4e-06 0.0001 22.5 0.6 2 23 407 430 406 430 0.97

4 5 9.4e-05 0.0071 16.7 2.3 1 23 436 460 436 460 0.96

5 5 3.4e-06 0.00026 21.3 0.3 1 23 466 490 466 490 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00015	0.011	16.1	0.3	1	23	313	338	313	338	0.97
2	5	0.41	31	5.3	0.1	5	23	380	400	374	400	0.80
3	5	1.4e-06	0.0001	22.5	0.6	2	23	407	430	406	430	0.97
4	5	9.4e-05	0.0071	16.7	2.3	1	23	436	460	436	460	0.96
5	5	3.4e-06	0.00026	21.3	0.3	1	23	466	490	466	490	0.95

Sequence Information

Coding Sequence: ATGCATTTGGAAAAGTATAGTAGCAGTGCCGAGGACGAGCATAGAAGAATTATCGCCAACGGTGGTGTTATCCAAGATGACTTCCAAAGATCCGGCGGATCCGTCAACAGTCAAACCTGTTGGGGTTCCTCCGTCAGCGAAGCCAGCAGCTTGTCACCGCTGCTCTTGAGCCCCAGAGACTCCGTCGACTGGGACCAATACGGAGCCAATCTACAGTACACCTGCTTCCCGTATCCTTCGACACCTACTACAGCTCCCACGCGACCCGACAGCGTCACCGACGCTATCCCAACGTGGTGTAGTTTGTACGGTGAATCCGACGAAGGCACCACCGACACGGCACCCTCGACACCCCGACAGAAACTTCCGTCCATGGGTGCCGCGTTCTCCAGGCCATTTTACCCCACGACCACGACTAGCTACTCTAATTATCACGGAAATGGTTCGCAGTTGTACGACAATCATCAGCAAAACGTAGCCAACGTCACCGACGAGTTTGACCTGAGTCTCATTCGCGGCGATCCAACCTCTCTCCTAGTCAACAACGCCTCGCCACCCTGCCCACCACCGTACCTCGACGATCTTCAGGAGGAACTGGATCCCTTCGCCGGCTTCAACAACTCCTGCTATGCGGTCGGACACCTGGTGTCTTCGCCGCCGCTCAACGCCTCTCATGGCGCCTCGACACCGATCTCCTCGTACCACCATAATAGAGGACAAATCGGCAGCTTCCTGTCAGCGACGACCTCGATCCTCGACGAGGCTTTGAGCGACAACTGCAACCAAGTTGTCCTCCCGCAGAACGAAGGACTTCTTCTCGCGCCGGATCGCGAATACGCGTacacctcgtcgtcgccgacaATTGTGGACACCGTTAAACTCGAGCCACCGTCGTCGGgtTGTAATCTGACGGAGGACGGTTCTTTCGGATTAGGGTACCAATGTCGATGGATGGATTGCGGTTGCGCTTTTCCAGAACAATCTGCTCTGGTGCGACACATCGAGAGGCGGCACGTCGAATCCTCGGCGTCGGGTAGTCACAGTCACACTAAAAGAGCACAGCGCGATTCGACCTCCGGTGAGACGAACAACGCCGCTGGAACGGTTTCTCAGGATGAATTCGCCTGCCTCTGGGAAGGTTGTCCGCGTGCTCGTCCTTTCAACGCTCGGTACAAGCTCCTCATCCACATGCGCGTTCACAGCGGCGAAAAGCCCAACAAATGTCCGTTCGCAGGCTGTAAAAAAGCATTCTCAAGGctcgaaaatctgaaaatacatcagagatcGCACACCGGCGAAAGACCTTACGCGTGTCAACACAGAGGCTGTTCGAAAGCGTTCAGCAATAGCAGCGATCGAGCAAAACACCAGAGAACACACTACgatacgAAGCCGTACGCGTGTCAGGTAAGTGGCTGTGGCAAACGATACACGGATCCATCGAGCCTACGCAAGCATGTAAAAAATCACGCGGAACCCGTCTCAGGGACGTCGGGTGTCGGAGTTCGCGGTACCACCACGCTGACTTGCAAAAGTTCTTCGGCACGGCTTGGTACGACGAGTACGCAGCGGCCCCAGCAAAAGGTGTCGACCTGCGTTGAAGCGCCATCGCCAACGACGATGCAGTACAGAGACGAGAAAGCTAGTTCCGGCATGAATTCCAACCCGAGGAGTtaccacgacgacgatgatctTCTACTTTCGACCGTGTGCGGCGAAGCAAGGATTTCAACCCCTTCAGACGATCGGCACAACGAGTACATCCCCTTCGAGTCTGTTCGGCGTTTCTTGATAGGTGATACCGACCACGTGGTCGATATAGCTACCGcttACGCGGAAGCCGATGTCTCGGATTTTCAAGAACTCGGATCCGACATCGAGCAGCAATTTCTGGAACTCAGTAATCTGGACGAGTCCGTGTTTATCGGCGGTTAA
Protein Sequence: MHLEKYSSSAEDEHRRIIANGGVIQDDFQRSGGSVNSQTCWGSSVSEASSLSPLLLSPRDSVDWDQYGANLQYTCFPYPSTPTTAPTRPDSVTDAIPTWCSLYGESDEGTTDTAPSTPRQKLPSMGAAFSRPFYPTTTTSYSNYHGNGSQLYDNHQQNVANVTDEFDLSLIRGDPTSLLVNNASPPCPPPYLDDLQEELDPFAGFNNSCYAVGHLVSSPPLNASHGASTPISSYHHNRGQIGSFLSATTSILDEALSDNCNQVVLPQNEGLLLAPDREYAYTSSSPTIVDTVKLEPPSSGCNLTEDGSFGLGYQCRWMDCGCAFPEQSALVRHIERRHVESSASGSHSHTKRAQRDSTSGETNNAAGTVSQDEFACLWEGCPRARPFNARYKLLIHMRVHSGEKPNKCPFAGCKKAFSRLENLKIHQRSHTGERPYACQHRGCSKAFSNSSDRAKHQRTHYDTKPYACQVSGCGKRYTDPSSLRKHVKNHAEPVSGTSGVGVRGTTTLTCKSSSARLGTTSTQRPQQKVSTCVEAPSPTTMQYRDEKASSGMNSNPRSYHDDDDLLLSTVCGEARISTPSDDRHNEYIPFESVRRFLIGDTDHVVDIATAYAEADVSDFQELGSDIEQQFLELSNLDESVFIGG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -