Basic Information

Insect: Arge pagana
Gene Symbol: -
Assembly: GCA_963969455.1
Location: OZ018315.1:12098524-12103759[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.0001 0.0079 16.6 0.9 2 23 155 176 154 176 0.91

2 6 1.2e-05 0.00091 19.5 0.3 1 23 182 204 182 204 0.97

3 6 8.2e-06 0.00062 20.1 2.3 1 23 210 232 210 232 0.99

4 6 8.4e-05 0.0063 16.9 7.0 1 23 238 260 238 260 0.98

5 6 0.0011 0.085 13.3 1.8 1 23 266 289 266 289 0.87

6 6 4.3e-05 0.0033 17.8 0.6 1 22 297 318 297 320 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.0001	0.0079	16.6	0.9	2	23	155	176	154	176	0.91
2	6	1.2e-05	0.00091	19.5	0.3	1	23	182	204	182	204	0.97
3	6	8.2e-06	0.00062	20.1	2.3	1	23	210	232	210	232	0.99
4	6	8.4e-05	0.0063	16.9	7.0	1	23	238	260	238	260	0.98
5	6	0.0011	0.085	13.3	1.8	1	23	266	289	266	289	0.87
6	6	4.3e-05	0.0033	17.8	0.6	1	22	297	318	297	320	0.90

Sequence Information

Coding Sequence: ATGAGTAACAGTAATTTACTCCAAGGCTACTCGTGGGACACGCAGTTCGATGATGCCCAACCACAATTTCCAAGACAACTGCAAGATGAGGTTATCAGCGTCTACGAAGTCTATGTCAAGGAAGAAACTGTTAGCGGAGATGGGCGTAGTGACATTTCGATGGTGTCGCACGAACCTGGTTCCAGCGCTCAACCGTTGCAGGGCGGCGAGTGTCTCGACCTGGAGGCTGCGATAGGGTCAGATATCATAAATGTAGATGGAACGATAACGAAATTCATTGGAAAAGAAAGTACCAAATACAAGATTATCGAGGGAAATATCGGCGATGAGAACGTAGTTGTCTACAATCATCAGTTGCGTGACGGTGCTGCGACTAGTTGTCTCGTTGATAAAGATGATCCCCGCTCCAGATTGCATTTTGTCAAGTATTTGAAACGGGATGGCAAAACTTTGAAGATTTGGGAATGTGGAATATgctcCAAGGAGTTTCGACATCAGTATACTCTGATGCGCCATTTACCGACTCATACCGACGAAAGGAACTTCAAATGCGAAGCATGTGGCAAGGCTTTCAGGCAATTGTCTACCCTGAGCCAGCACCGAGCGATACACAGCGATGCTCGACCTTACGTTTgcgaattttgcaaaaaaacatTCAACAGAGTGTCGACCCTCATCTCGCACAGAAAAACTCACTCCGAGCATAAACCACACAAATGTCATCTTTGCGGCAAAGGTTTTCACCAGAAAGGTAATTTACGCAATCACGTGTTCACGCATACGAACGAGAGGCCGTACAAATGTGAACTTTGTGGCAAAGGATTCAACCAAATGTCGAATTTAATGTGTCACAAAGTGAAAGCGCACGCTCACGCTGAAAAACTGCAGTACGTTTGTGGTATTTGCGGGAAGGAGTTTCCGCGTAGATTCTCCCTGAAATCCCATGAAGAGTTCAAGCACGGCATCAAGTATCGTAACGCGAACACGCCTAACGTgctccaggaaaaaaatgacgcgaatcTCGACACTCCTCGAaaCAAAAGCATGAGCATTGTATCGTTGCCCAACCGAGACCGTGCGCTATTGAGCGGTGCTGCAGACAAGGAAAACTTAATTTCCGCGGCCTATCCTGGAAACTTGATCATAGATAAAATTGACACGAAGGccatggaaaatgctcttctCGAAGGACACACGCCCTTTGCACTTCTGAAACCGGCCAAGGGAATCCCCGTCCTCGTCAAAGTTTCCCAAACCGCAAATCACAGACAAATGCTGACTCCAGCAACCGCCGAAGATTTGCGTATGGCTGGAGATATGTCCCTTAGCCCAGCTTTAACCAACGTCGACGACGTCAAGGCAATTCAAGTTAAAGTTCCGGTCGTCGCGACCATCACTCAGCGTATCGATTTGGATGGAAATTCCAGTTTTCTCATCGAACCTCCGGGATCAGGCCAAGAGCATGAAGGTCTCATCGAAGCGATAGAGTCCCAATCGTTTCCATGTTTGGATCGCGCTGACTTTAGAAACGACCAACTGGAACGACAAGCTCCAACGTCGTCGGTCGAGGATTGCGGTGATCTCTTAGAGCTTGCGGCTCAAGGTGGAATCCAATTTGTTAGAGCGACCGAAGATGGTCGTTACGAAGTGATGACGAGTAGCGAAGCTCGAGATTTGATGGCACAGAATTCTCACGACGTGACGATTCTGGACGGCGAAGATGCGGAGGCAATTTCTATGGCTAACATGCgtcaaattgaaaatcacgCAAAGTCTGTCATCGACGATCCTATCGATCGTATTCCGGAGTTGAATTTTCCTCATACTCAGAAGTTACCTACCATCGAAGGGATGGAAATTCTGAGGGACGAAGATATTCGTAtaatcgatgagaaaaatctgGAGGAAGATCATTTCGTCGGTGGGATAACCGTTTTGGATCAAAATAAGATCGACGAGTATATATTAGCATCGAAGAGTTTGTCGATGGAAGACAACGTAGGGATTTTAGAAGAAGTCGATGCTAACATAGCATCGATGGAATCAGCTGCGAAAATTCGTCGCTCGATACTCGATGGTCACGAAGTGgcatcgtcgacgattcgtaaTCTGCAtaaaaattttacaaaaacgtTCGATGACGGAATATCAACGATTCTCTGCGACGACGTCGAATTTCCATCCAGTTCGAAATCCACGGATCTTCATCCGAATTTAACGCAATTCATTAATTCCGAGGTGAAAATCCTTGGCTCGAAGAATTACAAACTTAAAGTTCTcccgaattcgtcgaaaagcaaattcgacgtcgacgaatcgCTCTTTCCAAATGATAGCGTGAAAATTTTGAGCTCTTCCGCAAAAATTCATCAAGATTACCTTCCACCGAGACAACACAGAGATTACAACTTGTTGAACAGCTATGCCCCAGAATTTGCCCCGACGAATGCGAAGAGAGAGGTGAAAATTCTCGGGAAGAAGAAAGAATTGAATACCGATGATTCTTGTTCACAAGCCAACGCGTCGACCTCGCGGAATTTCGAGGTGAGCAAAACTGGAGCTGAAGAATTGGATAGTAAAGCTTTACCACCGGACAGCGAAACGTATCTCTCGCTGATGCGAATCAACGGTTGGCTAAGAAACTCTAGTTAA
Protein Sequence: MSNSNLLQGYSWDTQFDDAQPQFPRQLQDEVISVYEVYVKEETVSGDGRSDISMVSHEPGSSAQPLQGGECLDLEAAIGSDIINVDGTITKFIGKESTKYKIIEGNIGDENVVVYNHQLRDGAATSCLVDKDDPRSRLHFVKYLKRDGKTLKIWECGICSKEFRHQYTLMRHLPTHTDERNFKCEACGKAFRQLSTLSQHRAIHSDARPYVCEFCKKTFNRVSTLISHRKTHSEHKPHKCHLCGKGFHQKGNLRNHVFTHTNERPYKCELCGKGFNQMSNLMCHKVKAHAHAEKLQYVCGICGKEFPRRFSLKSHEEFKHGIKYRNANTPNVLQEKNDANLDTPRNKSMSIVSLPNRDRALLSGAADKENLISAAYPGNLIIDKIDTKAMENALLEGHTPFALLKPAKGIPVLVKVSQTANHRQMLTPATAEDLRMAGDMSLSPALTNVDDVKAIQVKVPVVATITQRIDLDGNSSFLIEPPGSGQEHEGLIEAIESQSFPCLDRADFRNDQLERQAPTSSVEDCGDLLELAAQGGIQFVRATEDGRYEVMTSSEARDLMAQNSHDVTILDGEDAEAISMANMRQIENHAKSVIDDPIDRIPELNFPHTQKLPTIEGMEILRDEDIRIIDEKNLEEDHFVGGITVLDQNKIDEYILASKSLSMEDNVGILEEVDANIASMESAAKIRRSILDGHEVASSTIRNLHKNFTKTFDDGISTILCDDVEFPSSSKSTDLHPNLTQFINSEVKILGSKNYKLKVLPNSSKSKFDVDESLFPNDSVKILSSSAKIHQDYLPPRQHRDYNLLNSYAPEFAPTNAKREVKILGKKKELNTDDSCSQANASTSRNFEVSKTGAEELDSKALPPDSETYLSLMRINGWLRNSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -