Basic Information

Insect: Arge pagana
Gene Symbol: RREB1
Assembly: GCA_963969455.1
Location: OZ018308.1:14284015-14290705[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.001 0.075 13.5 0.4 2 23 88 109 87 109 0.95

2 14 8.2e-05 0.0062 16.9 0.6 1 23 115 138 115 138 0.97

3 14 0.24 18 6.0 0.1 1 23 218 242 218 242 0.86

4 14 0.44 33 5.2 5.3 2 23 248 270 248 271 0.96

5 14 0.025 1.9 9.1 0.1 1 23 462 484 462 484 0.96

6 14 3.2e-05 0.0024 18.2 0.2 1 23 493 515 493 515 0.98

7 14 0.00074 0.055 13.9 3.1 1 23 521 544 521 544 0.97

8 14 0.0023 0.17 12.4 2.0 1 23 927 950 927 950 0.95

9 14 0.00095 0.072 13.6 1.4 2 23 1233 1254 1232 1254 0.97

10 14 1.4 1e+02 3.6 3.6 1 23 1260 1283 1260 1283 0.96

11 14 0.0056 0.42 11.1 1.6 1 23 1327 1351 1327 1351 0.96

12 14 0.58 44 4.8 2.4 1 23 1440 1463 1440 1463 0.94

13 14 0.011 0.81 10.3 0.4 2 23 1516 1537 1515 1537 0.94

14 14 0.0067 0.5 10.9 5.9 1 23 1543 1565 1543 1565 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.001	0.075	13.5	0.4	2	23	88	109	87	109	0.95
2	14	8.2e-05	0.0062	16.9	0.6	1	23	115	138	115	138	0.97
3	14	0.24	18	6.0	0.1	1	23	218	242	218	242	0.86
4	14	0.44	33	5.2	5.3	2	23	248	270	248	271	0.96
5	14	0.025	1.9	9.1	0.1	1	23	462	484	462	484	0.96
6	14	3.2e-05	0.0024	18.2	0.2	1	23	493	515	493	515	0.98
7	14	0.00074	0.055	13.9	3.1	1	23	521	544	521	544	0.97
8	14	0.0023	0.17	12.4	2.0	1	23	927	950	927	950	0.95
9	14	0.00095	0.072	13.6	1.4	2	23	1233	1254	1232	1254	0.97
10	14	1.4	1e+02	3.6	3.6	1	23	1260	1283	1260	1283	0.96
11	14	0.0056	0.42	11.1	1.6	1	23	1327	1351	1327	1351	0.96
12	14	0.58	44	4.8	2.4	1	23	1440	1463	1440	1463	0.94
13	14	0.011	0.81	10.3	0.4	2	23	1516	1537	1515	1537	0.94
14	14	0.0067	0.5	10.9	5.9	1	23	1543	1565	1543	1565	0.98

Sequence Information

Coding Sequence: ATGGCCTGCCTTGCAGGTACCGTCACCACCGTGCCAACCCCCCAACACTCAGCGTCCACAGACAGCGGAGTGGAGCAACATCACAGTACCGGGGCTCAATCGGATGTGGAGCCGTCAGCATCGGTCGACGAATCCGGAGGAGGTCTCGTCTGTCCAACAGGGTGTTCGCTAGCACTCTCGACTACGGGAGAGTTTACGGATAATATGAGCGATCACAATCCGGCACGCAGTACCGACGGGAGTGTCGGCGAAGATGAGTGCTCCTGTCGCGTTTGCGGCAAGATACTGAGCTCTGCCAGTTCTCTGGACCGCCACGTCCTCGTGCATACGGGGGAGCGACCATTCAAGTGCGGTCTCTGCGGATCAGGATTTACAACAAACGGAAATATGCATCGACACATCAGGGCAGCTCACGGTAGTAGTCCGTCGACCAGTTATACGGATTCCGAGGCTAGTTGCGACTTCGATGGGCCGAGGCGGAAGCGCAGACGAGCGGAGGaattcaacaacaataacaacgttCAGAAACGAAAGTCACCGGATTTCTTGGACGACGAACCACTCGATGATACTTGCAAACGTAGCAGGCTGATGCACAACGATACCCAAGAGGAGAGCAAAATCTGCTTGCGCGACACTCAACCGACACCTCATGCTTGCCCCGCCTGTGGAAAAGCGAATTTCCCTACCAGTTCTCTGCTCGAGGCTCATCTAGAACAAAATCATTCCGACTACCCTGCCAAATGTGGTACGTGTAATTTGAACTTCAAAGACCATAGAGTACTGAGTCGTCATCGTACAACGGAACACCATTCCGAAAGATCGATAAACAGTCCAACCAGAACTTTACGCAACTCTGTAATCGGCTTCGACGATCTAACGTACGTTGATTTTTCAGCCGCGAAATTCCCAGCCATTGCTCGTGCTGCTTGCGAAAAGTCTAGACACAGACCCGCCGTTGGAGAAGTTGCCGTCTTTGAGTGCTGTAAATGTCACATAGCATTCCCATGCAGAACGGCGTTGGACTCTCACGAATCTGACTGTGGCAATCAGAGCTCGCAGTCGACCAGCGTTACTGATGAGTCAGCTTCTGGAAGAGATGACTTCTTCGCACGTTTGGACCTTCAAAACAAAGCTGCGTTAACGGAAGCCAGAGAGGGCAAAGATCTGGCGGACATTCAAAGCATCATCTCGGTCACTTCTGGTCCAATTTTGCAGAATTTTGCGAGACCTGATGCGGAAATGCCGAAAACTGTCGTCAAGGTTGGCACGAGCATCAGCTCTACGAATGCACGTGGCGGTACCGGTTCTGTCGAGAATCACGATGACGAGGTTCAAGATGCGTTCGCCACCGAGTTTCGCCGCATGAAACTTCGTGGTGAGTTTCCTTGCAGATTGTGCAATGCGGTATTTCCCAATTTGAGAGCTCTCAAAGGTCACAACCGAGCTCACGTAGGGGCTGATTCGAAAATGCCGTATCCCTGCAACATGTGCCCGTTCGTGAGCACCGACAAGGCTGCCCTGACCAGACATCTTCGATCTCACAACGGCGATCGACCCTACGAGTGTTCGTTGTGCAACTACGCGTTCACAACGAAAGCCAACTGCGAACGACATCTTCGCAATCGTCATGCCAAGATTACTCGGGAAGAGGTTAAGCGCTCGATCATATATCACCCGAACGAGGATCCGCTCAACGATACTACTGAAATCTTACCGAAAGCAGGAGTTCGCGATGATAACCGTCGCAATGAATCCGGCCAGAATCGTTCCACTGCGAGTGTCGCGAATACGAAGAAAGAAGCCAAAACGAACATCGAGGAACCTCCACGTCAGCCGGAACCGCTCCCAAGCGAGGAAATACAGGTGAAGACATTCGAGAAACCAGAAGTTTTTCACGGGCCACCGCTCGTAAAGATTCCGGACATAGTGCCGCAACTCCCGGTGGTCGTACCACCGACTGACATGGGCGGCTCACAAAACTCGATGATCGAGCCTTCCTATTCGAAGCGTAGCGATGATCACGATAACAACTCTACGAATGATAGTGTTTCTCTAGTCAATGAAACCAAACAGGAAATACACCAAAGACAAGATGTTCCCATGAACCTCAAAACCTCGCCTAGCCCTGCTAGCTTCGCTGAAGAAGCTCCCCTTGATTTGTCCATGGATGCCTTAGATTTGAGTAAGAAATCGAAACCACGAGATTCTCTAGATTCCGTGAATGCTCAACAAGATTTTCATAAGAGCAATAAAGAGTTTTACGACGCAAGGAATCAACTACTGTTGACTCAAGTGCTGATGAAGGCCGGGCAACATCCTCAACCTACCACCCTGGAAACGTTGTACAACGCAAATCTCCTCTACCACAACTTTGGATCGTTTCCCACTAGCATCGGTGCTGCTGGTCTTATCTCGCCCTATTTATTCAATCCCCATCTGTTGGGTCAAGAATTTTCCATGCCGAAGGAATTGGTCAGAGAACGTCAACTTCACAGCGGTGGGGTTATGGTGAAGCCTcaagctgctgctgctgctgctgctgcagccGTTGCTACAGCGTTCGAAGCTAGCCTGTCGCGGACTAAAGAAGCCTCCTATCACTCCAAAACCGCGACTAACGATTACCCTCCGAAAAGGGTGTCGCCGAAATTAACCTCCAACAAGATAACTCGGGACAAAGATCACATGGGCTCGTCGAATTCCGTGAAGATGGTGATAAAGAACGGAGTTCTGATGCCGAAACAAAAGCAGCGCAGATACAGAACCGAGCGACCATTTGCCTGCGAACATTGTTCTGCTAGGTTCACGTTGCGTAGCAATATGGAGAGACACGTGAAACAACAGCATCCACAGTTCTGGTGCCAACGACAAAGGGGTGGAAACTCGACTAGAGGCAGACCACCAGCGAATCCCCCACCAACGCTTCTACCAGATTTCAATCCATCCATCGTGCCGCAACCGTTGGCTCAGAATCCCGCTAATATCCTTCCAAAGCTGGAACAGGCCTCTACTACCGACTATGTTAAAACCATTATCCCTGATCAAGTGAAGTACGCGATTCTGGCTCATCAATTGAAGGGCAACAAAGTTGAGGAAGCCGAGTCTGAAACTGAGGAACTAGTAATCGACGAGGAGCCTGCCGAAGAAAATGCCGAGGCATCGGCACAGCACCGCAACGAGGATGAAAAGCCGCTGAGCTTACTGCGCGACAAACTAGAGGATCGAACTGCTCTGAGCAAAGAAGTGATCATGAAACAGCACGtgaacgaattttcaaaggaATATCTAGTAAAACTGAGAGAACAACATTTGGAGACGTTGAAGCGTTACGAGAGCACAAAAACGTTCGAGGCTCGCCCCGAACCTCAGATTTCGGCGAATAACATCAAAAAAGAGGTCGTTGACGAAGATGCTTCCGGGACGACGAGCGCGAAAGGGAAGGGGACGCGCaacgagaaggagaaaaacgaagacggTGGGGTCGATCTTGCTAGCGTTTCCAGACTGTTGGACAATGCTTCACAACAATATCAGCAGTTTCAACCTCAGTATCtgagcgacgacgaggaaggtCTAATAGCATCGAACAGCGAGGGCAACAACTCCGGAAGCGATGACAAATCGGATTCtggaaattccgaaattgTTCCTGGTAAGAAAAAGTCTGCCTATTCTTTGGCACCAAACCGAGTTTCCTGCCCCTACTGCCATAGAAAATTCCCATGGACTTCGTCGTTGAGACGGCATGTACTCACGCATACCGGTCAAAAACCGTACAAGTGCATATATTGCCCGTTATTGTTTACAACGAAATCCAACTGCGATCGTCATCTGTTAAGAAAACACGCGAGCGGTGCTACGAATACGACGAATCCAGCTCAGTCTTCCGCTGCTGCTGCCCAAACCTCGGCCGAGACTTCGAACGCTCTATTGAACAGCAACGCGTTTGCTATGAGAAACGTTCCGGAAAGACCATACAAGTGCAACCAATGTCCCAGCTCAACTTTCTCGACGCTTGGGAACCTCAAAAAACATCTCACCTCGAAACATTCGTCCGGTGGACCAAACTCGAGATCCGACAGCCCGTCGAGCGAGTCGCAAAATAGCCGGCCGGGATCAACCAAGCAAAATGATCATACTGGCTGCATCAGCCCATCGTCGAGTTTGGAGGAAACCACCGTTCGTTCGTCGCCAGGCATCGAAGAAAACCATAAGAACACATCGCGCACCTCTCCCAGCGTGGACGCCACGCATTCTGTGAAAACCTCGCCGGAATGTGGATCTACGGTCTCCTCCTGTTCCTCCGAGCTGCCCTTCAAGTGCCATCTCTGCGATGGCAGCTTTGCCGAACGCCAAGATTGCCTCGAACACATAAAAGTCAATCATAAAGCCGAATACGAGCTTCTCGTAACCAAAGGAGCCCTGGATATGGCTGCAGAGACCGAAACTCATCCCGAGGAACAGCAACAATCGTCTCAGCAGCATGGCGAAGACGGTGATGGCCAACGCGGAAAATTTCCAGACTACGCAAATAGAAAGGTGGTTTGTGCATTCTGCATGCGGCGTTTCTGGTCGGCCGAAGATCTGCGACGACACATGAGAACCCACACAGGAGAACGTCCATTCTCGTGCGACATTTGTCGTCGAAGATTCACCCTGAAGCACAGCATGTTGCGACACCGTAAGAAACACGGCGCGATCAGCTCAGCTATATACACGGGGAGCGGTGATGAAGAACAGTCTTCGTTGATGCCAGCCATCAATAGTAACCTCATAAATGGCAATAGCAACGCGTCGAAAGGTCAGAATAGATCAACGGGCATTTCGAGTGTTGCTGGCGTAGACGCTACTCTCCTTCGTTTCGGTGCCCACGAAAAACTTACCAGCATCTCTGGCAAACCAATAGCAACTCGCCACAACAGCAATGCCGAAGGAGCCGAGGATAACAACGATCTGATAACGAACCTCTTAGGTCTCAACGATAAAACGATCGTTGATAGAGTTCTCCAATCGCCGGACGACGCAGCGAAGCTCCTCGGCGTACAACGAAGTCAAGATTAA
Protein Sequence: MACLAGTVTTVPTPQHSASTDSGVEQHHSTGAQSDVEPSASVDESGGGLVCPTGCSLALSTTGEFTDNMSDHNPARSTDGSVGEDECSCRVCGKILSSASSLDRHVLVHTGERPFKCGLCGSGFTTNGNMHRHIRAAHGSSPSTSYTDSEASCDFDGPRRKRRRAEEFNNNNNVQKRKSPDFLDDEPLDDTCKRSRLMHNDTQEESKICLRDTQPTPHACPACGKANFPTSSLLEAHLEQNHSDYPAKCGTCNLNFKDHRVLSRHRTTEHHSERSINSPTRTLRNSVIGFDDLTYVDFSAAKFPAIARAACEKSRHRPAVGEVAVFECCKCHIAFPCRTALDSHESDCGNQSSQSTSVTDESASGRDDFFARLDLQNKAALTEAREGKDLADIQSIISVTSGPILQNFARPDAEMPKTVVKVGTSISSTNARGGTGSVENHDDEVQDAFATEFRRMKLRGEFPCRLCNAVFPNLRALKGHNRAHVGADSKMPYPCNMCPFVSTDKAALTRHLRSHNGDRPYECSLCNYAFTTKANCERHLRNRHAKITREEVKRSIIYHPNEDPLNDTTEILPKAGVRDDNRRNESGQNRSTASVANTKKEAKTNIEEPPRQPEPLPSEEIQVKTFEKPEVFHGPPLVKIPDIVPQLPVVVPPTDMGGSQNSMIEPSYSKRSDDHDNNSTNDSVSLVNETKQEIHQRQDVPMNLKTSPSPASFAEEAPLDLSMDALDLSKKSKPRDSLDSVNAQQDFHKSNKEFYDARNQLLLTQVLMKAGQHPQPTTLETLYNANLLYHNFGSFPTSIGAAGLISPYLFNPHLLGQEFSMPKELVRERQLHSGGVMVKPQAAAAAAAAAVATAFEASLSRTKEASYHSKTATNDYPPKRVSPKLTSNKITRDKDHMGSSNSVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFWCQRQRGGNSTRGRPPANPPPTLLPDFNPSIVPQPLAQNPANILPKLEQASTTDYVKTIIPDQVKYAILAHQLKGNKVEEAESETEELVIDEEPAEENAEASAQHRNEDEKPLSLLRDKLEDRTALSKEVIMKQHVNEFSKEYLVKLREQHLETLKRYESTKTFEARPEPQISANNIKKEVVDEDASGTTSAKGKGTRNEKEKNEDGGVDLASVSRLLDNASQQYQQFQPQYLSDDEEGLIASNSEGNNSGSDDKSDSGNSEIVPGKKKSAYSLAPNRVSCPYCHRKFPWTSSLRRHVLTHTGQKPYKCIYCPLLFTTKSNCDRHLLRKHASGATNTTNPAQSSAAAAQTSAETSNALLNSNAFAMRNVPERPYKCNQCPSSTFSTLGNLKKHLTSKHSSGGPNSRSDSPSSESQNSRPGSTKQNDHTGCISPSSSLEETTVRSSPGIEENHKNTSRTSPSVDATHSVKTSPECGSTVSSCSSELPFKCHLCDGSFAERQDCLEHIKVNHKAEYELLVTKGALDMAAETETHPEEQQQSSQQHGEDGDGQRGKFPDYANRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHGAISSAIYTGSGDEEQSSLMPAINSNLINGNSNASKGQNRSTGISSVAGVDATLLRFGAHEKLTSISGKPIATRHNSNAEGAEDNNDLITNLLGLNDKTIVDRVLQSPDDAAKLLGVQRSQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -