Basic Information

Insect: Arge pagana
Gene Symbol: -
Assembly: GCA_963969455.1
Location: OZ018311.1:8624524-8627763[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 3.2e-05 0.0024 18.2 3.2 2 23 531 553 530 553 0.94

2 7 9e-06 0.00067 19.9 0.4 1 23 564 586 564 586 0.96

3 7 8.4e-06 0.00063 20.0 2.2 1 23 592 614 592 614 0.97

4 7 0.0011 0.084 13.4 0.4 3 23 623 643 621 643 0.93

5 7 0.0005 0.037 14.5 5.3 1 23 651 673 651 673 0.97

6 7 1.7e-07 1.3e-05 25.4 0.5 1 23 679 701 679 701 0.98

7 7 4.3e-05 0.0033 17.8 0.4 2 23 713 735 712 735 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	3.2e-05	0.0024	18.2	3.2	2	23	531	553	530	553	0.94
2	7	9e-06	0.00067	19.9	0.4	1	23	564	586	564	586	0.96
3	7	8.4e-06	0.00063	20.0	2.2	1	23	592	614	592	614	0.97
4	7	0.0011	0.084	13.4	0.4	3	23	623	643	621	643	0.93
5	7	0.0005	0.037	14.5	5.3	1	23	651	673	651	673	0.97
6	7	1.7e-07	1.3e-05	25.4	0.5	1	23	679	701	679	701	0.98
7	7	4.3e-05	0.0033	17.8	0.4	2	23	713	735	712	735	0.95

Sequence Information

Coding Sequence: ATGGAGGTAGAAACAATCGAAACGGATAGTAATCACCTGGTAGAAATATTAAAACAAGCTGCAGCAGgggatgaaattattttggaGTCTGATCTCACCGATGGTGGTGACGGTGTAGAGGTAGAGGAAATCGTAGAGATAATCGAGGAGATTGAAGAAATAGAAGAGGAACAGGAAATTGAAGAAGTAGAAGTAGAAGAAGTggaagaagtagaagaagtagaagaagtagaagaagttgaagaagtagaagaagtagaagaagtagaagaagtCGAAGAAGTAGAAGAGGTAGAAGAAGTGGAGGAACTTGAAGAAGTCGAAGAAGTTGAAGAAATTGACGAAGCTGACCATAGTAAAGAAGAAGGATGTAGCAATGAAATTAACCGGTCTCGCACGAATCCTGTGGATTGCGATGAACACGACGTAACTGAAGTCCGTGAAAGAAATAATGGTAAATCTACGTCTGACAAATGCTTAGATGATAGCGAACTTCAAATAACTCCATCTAGAtcaaaatatgtaaaaaaacaattgaagaaTCATTTCATGAATGAATCAAACAAAGAAAGGATTACGCAAGTGGTAACTTACGACGTCGAGGAAGACTGGGAAGATGAAGAATTAGAACAAGGGCAAATACCAAGAAAAAACTCTAATTCATCAACTTATAATGACTCCAGAAATGGAGTTTCCAATCAAGGAAAACCTGCACAAAAACATGCCTCTTCGAATATCaatgaaaaacaagaaatcaCTCAGAAGCAATCGATCCAACTGGGAAGAGATCATAAGAACGAGAACTCGCGAaccaatgaaaattcaaatgaatatTGGGATGAAGAGGGTCAAGAATCAATGCAAAGTTACGAGGATGAGCAAATGATTGTCAGAGACACTGAGAATACAAATGCTCAACATGAAATTGTCAAGAATATGGAAAACAATCTATTATATACAGTTCTGACTTCAAAGAAGCAGAATAGCACCACAAAGCAAAGATATAATTCGTCCCGTTATATAAAAATGGAACAAATGGATGATAATTCAATGCCAGTGGATGGGACAATTTATTACGAAAACGAAGACATGGATACCATGTACGTAGCTCAATCTGTCAGCGATAATGATCCTTACCAATACAATAACAGTAGTAGAGATAGTCAGGGGGGAGAATGCAACAAAGAAGACGAGGACACAAATGATCGGGAGGAAAGTTCACAAGAACAAATTTTTCTGCATGAAGATGAAGATGGACAGCTCTACTTCAAAAATGATACTGGAAAACTGCAACCTGTTTATTTAACTGCTGATGGCAACTACGCGATTGCAGATAACAGTAGCGATGACCAGAACAGTCGTGATCAAATGCAACAAGGAAACAACTCACGACAGTTGGAAACTGGAGCTGTGCTCACACCTACAACAGATTATTCATCCAGCACCACAAACAAAACGGCTGTGGTGCCAGCATCAACAGTACAAGAGTTAGACAATGAGGATAATACTGTGACAATATCTTTAATCATCTCTGAAGACGAAAATGGGCAAAAGAGAACACAAGTTATCATTCCAACAACAGATAATCTCAAGTGCGAAACATGCAATAAATCATTTAAAACCTCATTTCAGTTGCTTAGACACAACAGACTGAAACATGCTCGAGAAGAAGAACACAATAACAGACCTTATCTTTGCGACTTATGTCCAAAAAGGTACCCAGACCAGAATTCATTAGCACGACATCAAAAGACTCACACGGGTAACCGGCCGTTCCAATGCCTTGAATGTCACAAGACTTTTCCAAGTTCGACTGCGTTGCGACGTCATCTCACGCTTCACAATCCTCATTTACGTCCATTACCTTGTATCTACTGCGGCCGACGTTTTCTTGATAAGTCCAGCCTCGCCAAACACCAACAATCTCATTTGTCTGGAGAGCAGCGAACGCATTCATGTGACATATGCCATAAAGCATTTTCACATGCCAACGACTTGCTCATGCACaagaaaaatcacgatccCGAAAGGAAGTTCAACTGTGAGGTATGTGGACGGGAATTCAATCGGCTGAATAATCTCCAACGACATATGATGGTTCACAAGCAGCAAAAAGGAAACAACGAAGAGGCTTTATCGTGCGACGTGTGTGGCATCACGTACAGGTTTATGAGTTCGTTAACGCGTCATATGGTCACCACCCATGTCAATCCCGAGAAGATGCGACAACAAGCCGAAGAACAAAGACGAAAACGCGAGAACAATTATCGCCGCTACGTCGAAAGCCGTCAGATGAACGATTATCAGGCAGCATCCAGTTattcgaacaaacgaaactCTTATCATCAAAACACACATGCTATTACTATGCAGATGAGTGATAATGATGGTGATGCTTAA
Protein Sequence: MEVETIETDSNHLVEILKQAAAGDEIILESDLTDGGDGVEVEEIVEIIEEIEEIEEEQEIEEVEVEEVEEVEEVEEVEEVEEVEEVEEVEEVEEVEEVEEVEELEEVEEVEEIDEADHSKEEGCSNEINRSRTNPVDCDEHDVTEVRERNNGKSTSDKCLDDSELQITPSRSKYVKKQLKNHFMNESNKERITQVVTYDVEEDWEDEELEQGQIPRKNSNSSTYNDSRNGVSNQGKPAQKHASSNINEKQEITQKQSIQLGRDHKNENSRTNENSNEYWDEEGQESMQSYEDEQMIVRDTENTNAQHEIVKNMENNLLYTVLTSKKQNSTTKQRYNSSRYIKMEQMDDNSMPVDGTIYYENEDMDTMYVAQSVSDNDPYQYNNSSRDSQGGECNKEDEDTNDREESSQEQIFLHEDEDGQLYFKNDTGKLQPVYLTADGNYAIADNSSDDQNSRDQMQQGNNSRQLETGAVLTPTTDYSSSTTNKTAVVPASTVQELDNEDNTVTISLIISEDENGQKRTQVIIPTTDNLKCETCNKSFKTSFQLLRHNRLKHAREEEHNNRPYLCDLCPKRYPDQNSLARHQKTHTGNRPFQCLECHKTFPSSTALRRHLTLHNPHLRPLPCIYCGRRFLDKSSLAKHQQSHLSGEQRTHSCDICHKAFSHANDLLMHKKNHDPERKFNCEVCGREFNRLNNLQRHMMVHKQQKGNNEEALSCDVCGITYRFMSSLTRHMVTTHVNPEKMRQQAEEQRRKRENNYRRYVESRQMNDYQAASSYSNKRNSYHQNTHAITMQMSDNDGDA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -