Basic Information

Insect: Arge pagana
Gene Symbol: salm
Assembly: GCA_963969455.1
Location: OZ018313.1:4728284-4751421[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 7.5e-06 0.00057 20.2 0.9 1 23 538 560 538 560 0.98

2 8 1.5e-05 0.0011 19.2 2.1 1 23 566 588 566 588 0.98

3 8 0.094 7.1 7.3 3.8 2 23 991 1012 990 1012 0.98

4 8 6.5e-08 4.9e-06 26.7 0.6 1 23 1018 1040 1018 1040 0.97

5 8 9e-05 0.0068 16.8 2.6 1 23 1050 1072 1050 1072 0.98

6 8 0.0031 0.24 11.9 1.9 2 23 1472 1493 1471 1493 0.97

7 8 0.054 4.1 8.0 1.2 1 15 1499 1513 1499 1514 0.93

8 8 1.5e-06 0.00012 22.4 2.1 3 23 1737 1757 1735 1757 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	7.5e-06	0.00057	20.2	0.9	1	23	538	560	538	560	0.98
2	8	1.5e-05	0.0011	19.2	2.1	1	23	566	588	566	588	0.98
3	8	0.094	7.1	7.3	3.8	2	23	991	1012	990	1012	0.98
4	8	6.5e-08	4.9e-06	26.7	0.6	1	23	1018	1040	1018	1040	0.97
5	8	9e-05	0.0068	16.8	2.6	1	23	1050	1072	1050	1072	0.98
6	8	0.0031	0.24	11.9	1.9	2	23	1472	1493	1471	1493	0.97
7	8	0.054	4.1	8.0	1.2	1	15	1499	1513	1499	1514	0.93
8	8	1.5e-06	0.00012	22.4	2.1	3	23	1737	1757	1735	1757	0.96

Sequence Information

Coding Sequence: ATGCAACTGATGCGATGGAGCATCACCAGAAGACTCGAGCGTCGCGAAGGTGACAAGCGTCGGGAAGCCTCGGATAAACTTTGTCAGAACGGATCCACTGGCGACACTGGTTCCTCTCACGCCTCACGTTCCGGAGAAGGAAATGAGTCTGGATCCGATGGTGACGAGAGCGCGGGTGGAGCGGGAGcaggaggtggaagaggaggaggaagatgTAGTGGCGACGgtagtagtggtggtggtggtggtggtggtggtggtggtggtggtggtggtggcgttGGTAATGCCAACAGCAGAGCCGACGGTGGTAGTAGTGGTAGCGGTGGTGGGGAGGAGGCTGTCGACCTCACCTCGTCACGGTCACATcaggacgaagaggaggaggaaagagaagatCGCGAGGAATTGCcgatggacgaggacgaagaggatGGCATCGAAGAGTCCGAGGAGGTacaggacgacgaggaagaaggtACGCGCAAACAGATACGGCATCGTCAGGACGCCGAGAACAACAACAGCTTCGTCGAGGCTGGTCAAACCACTCCAGCCGGGCTGTTTCCGCCGGCAGGTGCTAGTCACGTGACCCTCGAGGCTTTGCAGAATACGAAGGTAGCCGTAGCGCAGTTCGCGGCCACGGCCCTCGCCGGCGGTGCCGACAGCGAGGCAGCCCTCCAAGATTTGGCACTGCTGCAGAGTACGCTGTACACTCTTCAGCACCAACAGGTCTTTCAGCTACAGCTGATCAGCCAGCTGCAACAGCAGCTCTCCATCACGCACAGCCAACCAAATCACGGCACGTCCGTCGTAgccgctgccgccgccgcGGCGGCGGCTGCCgccgctgccgctgctgcCGGAGCTCAAGGCACCGGCGTGGCCGCAGCGACGCCCCTGGCAGCGACGAGCCTCGGCAATCATCATCACGctcaccaccaacaacaaccacaccaccaccaccaccatcaccaccaccatccGCACGGAGTCGTCGACGGTGCGTCCGTGATGGCGGATGGCAGCGCCAGCAAGGAGGGTTCGCTGTCGCCCGGTATCTTACACCCCAAGCCCTTGTCGGCGCTCACCTCTCCACCCTCCTCCCGACCCCCGAGTCATCAGCATCCCTCGTCCCCGTGCCCGTCGACCGGAAGCTCGCCGCAAGAGTTCCCCGTGCCTCCCTCGAGCGGGTCGCCCATCGTCGGATTGACCCTACCGGCCTCCACGCCCGGCGGATCTGCCGCCGGCGCCGCTCTGCTACAGGCAGGCTGCGGCAGCGCGACCCAGGGCAACGTTCCCACTGCCAGTCAACACCAGCAGACGAGCGCGGTCGGTCAGATCTCGCTGTCCCATCAAATGCCACCGCTCTGCTCCATCAGCTCTTCGCTGGCGTCTACCATCATCACGAACAATGATCCTCCGCCTCTCCACGAACCCAACACCCTCGAAATGCTCCAGAAACGAGCTCAGGAGGTCCTTGACAACGCTAGCCAAGGCCTCTTGGCCAACAACCTGGCCGACGAGCTCGCGTTCAGGGGTAGCAAAGGGTCTAGGCTATCCCCGTACGATTCAAAGACCGGTGGCGGTCGAGGCGAGCCTTTCTTCAAGCACCGATGCCGCTACTGCGGCAAGGTCTTTGGCAGCGACTCCGCACTCCAGATTCACATCCGATCTCATACAGGTGAGCGACCCTTTAAATGCAACGTCTGCGGAAGCCGATTCACCACCAAAGGAAATCTGAAGGTTCACTTCCAGAGGCACACGGCCAAGTTTCCCCACGTTAAAATGAACCCGAACCCCATACCCGAGCACCTCGACAAGTATCACCCGCCTCTTCTGCAGCAACTGGCTGCCTCCGGGCAGAGGCCCCTACCCTCTCCCCCACCTGGACCACATCACGCGACCTTTCATCCCGCGGTGGCTCACGGGTTCCTCCCACCTCAGCCACCTCTACCGCTCACCTTGACCCTGCCAGGTATGCCACCCCTTTACCGACCACCCGCCGCTGTCGCGGGCCAACGGGACGAGCAGGATGTTCCCGAGAACCTGAGCAAGCCTCTCATCGCGGCGTCCACCCCGTCACCCCGGTCACCTACCACCGCGGCTGCCAACGCGAACGCCGCAGCTCAATCAAACTCGCATCATTCCTTTCACGAACATCAGTCTCTCCCGCACTCCAAGTCGCAACTCCACCACCAGCAAGCGCCGCCGCAAACGCAAGCTCATCAGCCGCCGCAACAGAGGCTCGAGGAGTCCGGATCGCCGGCAGCCTCGACGCCCGCGAACGCTGACGCGTATCATCGGCCGACGTCCACCGGTCGCGAGGATGTTCTCGACCGGGTAACGCCGAAACGTGAACCCGAGGAAGCGGAGGAGGATACCGCCGGCGAAGAGGAGCCCGACGACTTTCACGAGGCATCGCGGCGCTACCTGTGCGCAACCTCGCCGTCGCTGACGACTCAGCAGACTCATCCGGCTCAGGTGTACGAGGACTGCAGCATGGACAGCAAGACCAGCGCTGGGCTGAGAAATCTCGAGGGCGACGGCGAACTCGAGGGTGACGAAGAGATGGAGGAACAGCCGGAGAACTTGTCCAGCCGCGGAGCACAGGGTGTTGGGACGCCGCAAAGAATGCTCGGGTATCCGGGCGCCTCGCCGGCTAGCAGTAGCGCGAGCAGCGGCGGCAGCCTTCAGACGTCGTTCGCCGGTATACTCTTTCCCGGACCACCGTCCCATCATCAGCATTCCCATCATCCGTCCTCGGTCGGTGCTACCACTCCCACGGGACCGGGTACCGAGATGATGGTGGATCCCGCGAGAGATCCGGCCATCTACTCCAGCCTGCTACCGCGACCGGGCAGCAACGACAACTCGTGGGAAAGCCTCATCGAAATCACGAAGACGTCGGAAACGTCGAAACTCCAACAGCTCGTGGACAACATCGAGCACAAGCTCACGGATCCGAACCAGTGCGTCATCTGTCATCGAGTTCTCTCCTGCAAGAGCGCTCTGCAGATGCATTATCGCACGCATACCGGCGAACGACCCTTCAAGTGCAAGATCTGCGGTCGCGCCTTCACCACGAAGGGCAACCTCAAGACGCACATGGGTGTGCACCGAGCGAAGCCCCCGCTTCGCGTACTCCATCAGTGTCCCGTCTGTCACAAGAAGTTCACGAACGCCCTCGTCCTTCAGCAACACATCCGACTGCACACAGGTGAACCCACGGACCTGAGTCCCGAGCAGATTCAAGCTGCCGAGGTCAACGAGTTTCCCAGCAATTATCCTCCCGCTCCTCATCATCCCCTCGCGTCCTTTCTACCCCAAGGCTtccatccatccattcatCCCGGAGCTGCCGGTACCAGCTTCGCTCTGGGCTTCCCTCCCTCCAGACACCACCTCGTCGATCGTTCCTCTCACGAGTCGAATCACGTTGACTCGAAAGATTCCAGGCGCCATCCCTCCCATCCATCCCATCAACGACATCACTCCCAACCGCAGCACCAGCATCCTCGGCAATcgcatcaccaccaccaccacaacCACCATCACCAGTCCTCTCAGCATCCGagtcaacaacaacgaagataTCTCGACGAGCAGGGCGACGAGATGGAAGATCaggaggatgacgaggacgaggaagaagagggccgagacgaggaggacgaacGTTGCGAGGAAACCGGTGATCGACAAAGCGCCGATGGCGAGGACGAGCAGGACGAGATTCAAGACCAgcacgacgaggaggaggagaccGAACGACGAAGACATTCGATTCCTCTCTTCTCCACCTCGTTGTCAGCCCTCGAAAACCAAGTTCGCACGATCACCACGACCTGTGCGAACGGTGGCACGCCTGTCCATCCGACCTCCTCGCCGCCGACCCACCATCAGCATCGTCACCGTTACAACGGCACGGCCGAGAAAGTGGCGACGACGCCCGGTGGTGCTACACCGATGATGGGCGCACCGCTAGACCTCACACCCCGGGCATCCTCGACGCCGGGAGACGCAACCGCGTCGACGACGTCGATGCTAACGAccacgacgaccacgacgacgacgacgacgacgacgactacgacgccGTCGTCGacaccgccaccgccaccccCGTTGCCCGCGCCGCAAACGCAGCCGGGCACCCAGACGCATCATCCCTCGAATCCTTTCGGGATGTTCGCGGGTCTTCTTCAGGCTGTCTCGTCACCTCCGACGACCAGTTCCACGGGGTCCACGGGAACCGGTGTTAACAGCATTGCAACGATGAATGCTGGAACACCTGGGAGCGGTACCGGTGGTCCTCTAGCCTCGTTAACTACGTCCGCAGTCCTAGCTGCCACATCCACCTACAACCCGCTCGGCCTAGCTGTCGGAGGGCCAGCAGTCCGTGGCAACACTACGTGCAATATCTGCTACAAGACATTCGCGTGTAACTCCGCCCTGGAAATACACTACCGAAGTCACACGAAGGAACGACCGTTCAAGTGCACCGTCTGCGATCGAGGATTCTCCACGAAGCAAAACAACGGTTCGTGGGAGGACGTCTGCTCCTGCGCGAACCAAAGGAACCCTTTCCAAACAACcacaaccaccaccaccaccaccaccaccaccaccacaacCCTGACTACCAATCACACTAGCCCAAACCATCATCTTCACGAATACAACTACCTTCAACTACCACAACCATCACcgtcaccatcaccatcaccgtCACCCATCAGCAACCACGAGAGGTCCAAACGCAGGCGACGACGGCCTGAGGATAAGAAGACCCGGGGGCGGTCTGGGTCCGGAGGGGGGCAGCATCTGACGTATGCAGCCGTCCGCTTGCCCCCGCTACTGCCCCCCGCCCTCGGACTTCTCACCTCGGACCACGTCTTCCTGGGCAACATGAAGCAACACATGCTAACGCATAAAATTCGCGACATGCCGTCTCACCTCTTCAACGACTCCAAATCTCCCggacagcagcagcagcatcaacAGCAAAACCAACATCTACAGGAACAGGAAACCTCCAGGAGCTCCGTGTGCTCCGATGACGGAAGTCTTCCAGCTCCGCCACCGCCTCCACCTCCACCGATGCCACCTCTAGCCATGGAGTCCGCCGTGCCGGTGAAGAGATCGCCACCCGAGGGAGACCTTCCTGCACCGAAAAGGCCTCAGAGCATGACGAGCAAACATTTGTGCCAAGTTTGCAATAAGAacttctcgtcttcgtccgcACTACAGATTCATATGAGAACCCATACGGGTGACAAACCCTTCAGATGCACCGTATTTTCATTCGCCCAGCAGGTAGGGTCGCGCTACGACGGAAGCTGCGGCGAGCAACGACGTAGACTTCTGACCAACTCCGAATGGGAAGACGACGGCAGGGATGGCGGCGAAATTCCGGCTGATAAGAACATTTACGGTGTGCGCAAATGGCTCGTATGCGTATTGGCGTGTCTcctcgtttcgctcgtcgcGATCAACACGTTTACCTACGAACAATTGAAGGCGATACGCTTCGGCCGCGGATCCAGCGAAGATACCGCCAACGAACCTCGAGCTTCGGCGTCGCGAGTCATCCCTGGATTCGTCGTGCACGCATCCGGATGTCGCATACCCTCGTTCGAAgtcgtcgacgcgaatatcGAGCGCTTTTTTGCACCGGAAAAACCGATCGTCTGCAGCGCGGGGATCCACTTGCcgctcgtcgattcgaatctcACGGCGATTTACGTGAACCCGGAAGCCAGGCCGCGTTACTACAACGCCAGCGAACGAGTCTCGTGTTGTTACCGCGCTTTTCAAAGGGCCGAGAAAAACGACCACGGACTCGCGTATGATAAGCAGTGCCAAAGTTTCAACGAGTCCGGCCAAGTGGTAGAGGCGGAGTTCGTCAAGATAGAATGTctgaaaaatgggaaacaaaTTTACGAAGACTATCATGCTTTCGTGCCACGGAAGCCTGTAGTAGAAGAACGATGCCAAAATGCCTCGAGAAACTTTGTCAACAGGCGTTTGAGTGTCCTGGTTTTGGGCATCGATGCCGTATCGAGActgaattttcatcgcacgATGCCCAAGACTGTAGGTGCTCTGCAACGACTCGGGGCTGTCGAGATGTTGGGATACAACAAAGTGGGAGATAATACGTTTCCCAATTTAGTGCCAGTCTTAACCGGTTTGTCGGAGCAAGAGCTTTCTAAAGAATACTGGCTCGGCACGAAAGACACTTTCGACGCCAGTCCTTTCATCTGGAAGAACTTCAGCCAAGCCGGATACCGCACGATCTTTGCCGAGGATGCGTGCCACATGGGAATCTTCAACTATCTAAAGTCAGGTTTTAAGAATCCACCAACCGACTACTACTTGAGGCCGTATTGCATTGCTGCCGAGAAAAACATAGGAAATACTCATAAGCTCAACGCTGATCTCTGCGTTGGAACCCGTAAAACTTTTGACAATCTACTTTCCTACTGCGGGAAAGTCACCAGGgaattcgtcgacgatcctTACTTCGCCTTCTTTTGGCAAGCTAGTCTCACTCACGATTTTGTGACCTACGGACAGCTCGGCGATGCATCGTACGAGGAATTCTTGCTCAGAATATCCAAGGATAAGTTAATCGAGAACGTCGCCCTTCTCGTCATGAGCGATCATGGTATACGATGGGGAAGCTTTCGTCAGACCTATCAGGGGCGAGTCGAGGAAAGTTTGCCTTTCGTTTTCCTCTTACTGCCAGAATGGTGGCGTCAAGAGCATCAAGGAGCATGGGCTAATCTCAGAAGCAACACCAATAGTCTCACCACTCCATTCGATCTCCACGAAACACTGTGGGATCTTCTGAAATCTGAAGAACTAATCGAAACGGAGCTTCAGCAACGAACCAAGGCTCTTTCCGCGGAGACTATACCTCGAGGGCTCAGCTGGTTTTTACCGGTTCCCGATTACAGGACTTGCGCTATGGCAGGCATATCAGGCCATTGGTGCATGTGTCATTCGAGTCAGAACGTCTCCGTCGACGACCCTATGGTTTTAAGTGCCGTTGACTTTCTACTCGatcatttaaataacatgatTACTACTTACCCGCAGTGTTCCGAGTTAAAACTATCAAAAATCGTCAGCGCTAAAATTTGGGACAATCGATCGCAGACCAAAGATAAAGAACCTCATATGATAGACTATACGGTCACCATACAAACAAAACCGGGAGGTGCTGTATTCGAAGCAACGATTAGACATTACAAAAACGTAGATCAACTGGTGGGCTCCATCAGCAGACTTAATCTTTACGGTAAACAGAGCGCTTGTGTTGACGACTTTAAAATGCGACTCTATTGTTATTGCCGATGA
Protein Sequence: MQLMRWSITRRLERREGDKRREASDKLCQNGSTGDTGSSHASRSGEGNESGSDGDESAGGAGAGGGRGGGRCSGDGSSGGGGGGGGGGGGGGGVGNANSRADGGSSGSGGGEEAVDLTSSRSHQDEEEEEREDREELPMDEDEEDGIEESEEVQDDEEEGTRKQIRHRQDAENNNSFVEAGQTTPAGLFPPAGASHVTLEALQNTKVAVAQFAATALAGGADSEAALQDLALLQSTLYTLQHQQVFQLQLISQLQQQLSITHSQPNHGTSVVAAAAAAAAAAAAAAAAGAQGTGVAAATPLAATSLGNHHHAHHQQQPHHHHHHHHHHPHGVVDGASVMADGSASKEGSLSPGILHPKPLSALTSPPSSRPPSHQHPSSPCPSTGSSPQEFPVPPSSGSPIVGLTLPASTPGGSAAGAALLQAGCGSATQGNVPTASQHQQTSAVGQISLSHQMPPLCSISSSLASTIITNNDPPPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRGSKGSRLSPYDSKTGGGRGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPIPEHLDKYHPPLLQQLAASGQRPLPSPPPGPHHATFHPAVAHGFLPPQPPLPLTLTLPGMPPLYRPPAAVAGQRDEQDVPENLSKPLIAASTPSPRSPTTAAANANAAAQSNSHHSFHEHQSLPHSKSQLHHQQAPPQTQAHQPPQQRLEESGSPAASTPANADAYHRPTSTGREDVLDRVTPKREPEEAEEDTAGEEEPDDFHEASRRYLCATSPSLTTQQTHPAQVYEDCSMDSKTSAGLRNLEGDGELEGDEEMEEQPENLSSRGAQGVGTPQRMLGYPGASPASSSASSGGSLQTSFAGILFPGPPSHHQHSHHPSSVGATTPTGPGTEMMVDPARDPAIYSSLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLSPEQIQAAEVNEFPSNYPPAPHHPLASFLPQGFHPSIHPGAAGTSFALGFPPSRHHLVDRSSHESNHVDSKDSRRHPSHPSHQRHHSQPQHQHPRQSHHHHHHNHHHQSSQHPSQQQRRYLDEQGDEMEDQEDDEDEEEEGRDEEDERCEETGDRQSADGEDEQDEIQDQHDEEEETERRRHSIPLFSTSLSALENQVRTITTTCANGGTPVHPTSSPPTHHQHRHRYNGTAEKVATTPGGATPMMGAPLDLTPRASSTPGDATASTTSMLTTTTTTTTTTTTTTTTPSSTPPPPPPLPAPQTQPGTQTHHPSNPFGMFAGLLQAVSSPPTTSSTGSTGTGVNSIATMNAGTPGSGTGGPLASLTTSAVLAATSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTVCDRGFSTKQNNGSWEDVCSCANQRNPFQTTTTTTTTTTTTTTTLTTNHTSPNHHLHEYNYLQLPQPSPSPSPSPSPISNHERSKRRRRRPEDKKTRGRSGSGGGQHLTYAAVRLPPLLPPALGLLTSDHVFLGNMKQHMLTHKIRDMPSHLFNDSKSPGQQQQHQQQNQHLQEQETSRSSVCSDDGSLPAPPPPPPPPMPPLAMESAVPVKRSPPEGDLPAPKRPQSMTSKHLCQVCNKNFSSSSALQIHMRTHTGDKPFRCTVFSFAQQVGSRYDGSCGEQRRRLLTNSEWEDDGRDGGEIPADKNIYGVRKWLVCVLACLLVSLVAINTFTYEQLKAIRFGRGSSEDTANEPRASASRVIPGFVVHASGCRIPSFEVVDANIERFFAPEKPIVCSAGIHLPLVDSNLTAIYVNPEARPRYYNASERVSCCYRAFQRAEKNDHGLAYDKQCQSFNESGQVVEAEFVKIECLKNGKQIYEDYHAFVPRKPVVEERCQNASRNFVNRRLSVLVLGIDAVSRLNFHRTMPKTVGALQRLGAVEMLGYNKVGDNTFPNLVPVLTGLSEQELSKEYWLGTKDTFDASPFIWKNFSQAGYRTIFAEDACHMGIFNYLKSGFKNPPTDYYLRPYCIAAEKNIGNTHKLNADLCVGTRKTFDNLLSYCGKVTREFVDDPYFAFFWQASLTHDFVTYGQLGDASYEEFLLRISKDKLIENVALLVMSDHGIRWGSFRQTYQGRVEESLPFVFLLLPEWWRQEHQGAWANLRSNTNSLTTPFDLHETLWDLLKSEELIETELQQRTKALSAETIPRGLSWFLPVPDYRTCAMAGISGHWCMCHSSQNVSVDDPMVLSAVDFLLDHLNNMITTYPQCSELKLSKIVSAKIWDNRSQTKDKEPHMIDYTVTIQTKPGGAVFEATIRHYKNVDQLVGSISRLNLYGKQSACVDDFKMRLYCYCR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -