Basic Information

Insect: Arge pagana
Gene Symbol: -
Assembly: GCA_963969455.1
Location: OZ018309.1:11719260-11723066[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0009 0.067 13.6 0.5 1 23 191 214 191 214 0.95

2 9 5.4e-06 0.0004 20.6 3.7 1 23 217 239 217 239 0.98

3 9 5.6e-05 0.0042 17.4 4.6 1 23 245 267 245 268 0.96

4 9 0.0012 0.089 13.3 0.6 3 23 276 297 274 297 0.93

5 9 7.7e-06 0.00058 20.2 1.7 1 23 303 325 303 325 0.96

6 9 9.5e-06 0.00071 19.9 1.0 1 23 331 353 331 353 0.98

7 9 0.00011 0.0086 16.5 4.1 1 23 359 381 359 381 0.99

8 9 7.2e-07 5.4e-05 23.4 0.8 1 23 387 409 387 409 0.97

9 9 0.0012 0.088 13.3 0.8 2 23 417 438 416 438 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0009	0.067	13.6	0.5	1	23	191	214	191	214	0.95
2	9	5.4e-06	0.0004	20.6	3.7	1	23	217	239	217	239	0.98
3	9	5.6e-05	0.0042	17.4	4.6	1	23	245	267	245	268	0.96
4	9	0.0012	0.089	13.3	0.6	3	23	276	297	274	297	0.93
5	9	7.7e-06	0.00058	20.2	1.7	1	23	303	325	303	325	0.96
6	9	9.5e-06	0.00071	19.9	1.0	1	23	331	353	331	353	0.98
7	9	0.00011	0.0086	16.5	4.1	1	23	359	381	359	381	0.99
8	9	7.2e-07	5.4e-05	23.4	0.8	1	23	387	409	387	409	0.97
9	9	0.0012	0.088	13.3	0.8	2	23	417	438	416	438	0.96

Sequence Information

Coding Sequence: ATGGAAAACAGACCGGCACCGCTTCGTTCCAGGCGGGTATGCCGATTCTGCCTGACAGAGTCCGAGCCACTCAGCTTCATTTACGAGAGAGACCACAGTAAGCCGTTCCAAGTGCCGCTTACGCTGCAAATCATGTCCTGCGTCGCGATCGAGGTGTATGCTGCCGATGGAATGCCGCAAATGATATGTACCATTTGTCGTTGGAACCTCGACCGCTCgtataaattcaaaattcaatgtAAAAAAGCCGACGAAGCGCTGAGAGCTTATCCAGTTTCGGGAGTCTTACCCAGACCGTTCCCACCAATCCCGAGCAATCCACCGGATGTTGGCAACAAGAGGTCTGCCGAACAACGATCGCAGTCGGAACAGTCTAAGAAggcgaaaatcgaagaaaacgagCGGCGAGAGTTACGGGAACGCGAGAGACGAGaacaaactgaaaaacagACGGACAACAGCGATCATCGCGATTTGTACGAAGATGAACAGGACGGAGGTAGCGAGGGTGAGCAAAAGAACGCCAATGAGAAAGATAAACGAAAGTTGGAACCCGGAGAAATTAGAGTTCATGCTTGCGATCAATGCGACAAAACTTTCCCCGTGAGACAAGCGCTCCTGCTGCATACTCAGCGCGCTCACCGCAATCATAAGTGCGTCAAATGCGACAAAGTCTTCTACTCCAAATACGACCTTTCGAATCACATGTCGACCCACACGGATGACAAATCGTTCACTTGTACGATTTGTCACAAACAATTTGCGAGATTGAATTTGCTTCAACGTCATGAGAAGGTGCATCATCAAAACGAGCTTCGATACGGATGCCAGCACTGCGATCGGGAGTTCTTCAGTACCAGCGAGCTTGAAAAGCACGAAGAAATTGCTCATAAAACCTCGAAACCATATCCGTGTAACATCTGCAACAAAACATTCACCTACAGACACGGACTCGAACGTCACGAGCTCCTGCATATCGATGACAAGACTTTCCCTTGTGAATATTGCAAGCAGGCATTTCGTTCGAGCACCAAGCTGGCGAGACATTTGTCCACTCATCCGGCCCATCGACCGTATGTTTGCGAGTTATGCCCCAGGACCTTTTTGCTGTCGCATCATTTGACCAGACACATGCGTACTCATTCCGTGGAAAAACCCCACGTTTGCGAAGAATGCGGCAAGGCATTCAAGCGCAAGGAGAGCCTGGACGTGCATCAGTTGACCCATGCGAAGCGTGGCATGGGCTTGACATGCGAGATTTGCCAAGAGTCGTGCAGGAACAGGGCCGATTATGTTATTCATATCAAACAGCACATCGAAGCTGGTGAGAAGATGGGACCGGATGGGCTGAGACCGGACCCGAGAAAGGACAAAATTGATTCAGATtccgaagaggaggaggagacgtACACCGACGGAGATGACAACGACTACGAGCCACCAGCCCACTTAGCCAAGATGGTGCCGAAGATTGAACTTCCCGAAAGCGAAGATGATCCGGAGAAATCTGACAGAAAAGAACACGTTGTGTACGTCAGGAACGCGGATGGAAACGTTGTGAAGAAGACTATAAAGACGTTGATGCCGATTCATCGCAGAGAAATTCAAGATAACAAGACAAGATCTACTTCGAGCAGTTCTCCGGCGCCAAAATCTACCCCGGCAAAATCGGACAATCGAAACGTTGCCTCCGATAACGACGCCACTCCGAAAATTCGCAGCCAGTACCGCGTGGACGATACCGAAGCAGAGGTACAGAAAATAGTTGCTTCAGTTTTCAAAGAACACAAGATACCGCTTAAGCATCAAAACATTCCACAGGATCAATCATCCAAGGACTCTCCATCGGCCACGCCATCGAGTCAAGGTCAATCGCGACCGCAGCAAGGCAGTTCCAACCAAACTCCTAAGGAGGATGGTCCCAAGTCGGATGCTGCTACGGCTACTCCAAAATCCGTAAACACCGTGAAGGTCATCAAGCGAATTGTCGTTCGCAAGCCTTTGGGTAGCACCGAAGCTGCTCAAGCTATGGCGTCGAGTGCCAAGGAGACCGAAGGTAACGCTCCCAAAGTAACCAAACGTGTTATAGTACGCCGAATAATCAGGCACGGCGATACCACTCGGGAAGTTATCTTGAACCCGGATGGAACGATGCTCGACGCTGCAGAGCTGGCAAAACTTCCGACTCGAAACGTTGTCAAGCGGGTAATAGTTAAAAAACCAAGAGAAAAGACTGAAACTCAGTCGCCGGAACAGCAGTCCAAAGCTGGCAACGCGGATGGCAAGTCAGCAGAAtcgaaatttgaattgaaatcGTCGCAATCGGCGACGGAAACTCCCCGTACTTCTCAGCGACCGTCGAGTCCTGCGCAAAAACGATccgagacgacgaaaacgcCAAAGAAGAACGAAAACCAAGGACGCAACAACGAGATGAACGACGAGAATCCCGAAACTACGAAGGAGAAATTGGAGAAACTAGAGAAACGCGTTGAACAGCAAAGGTTGAAGATCGAAGAGTTACAGGCACGTAAACTACAAGAAATGGACATTTCTGAGGATATATTGCCAGAGCGACACGACGAGTCCGAGGAAGAACAACAGCTGCCGTTGAAACGAGTCTTTGTGAAACGGAAGCAAAGTATATACGACGAAGAACAAGAATACGACAGCGAGGACGGTGGTCCTCTGGTTTTGAAAGATGAGCCGATCGAAGAAGCACCCGCGGCGGAACCGCAAACGAAAGATTACAAGAAACCGGTGGTTACCAGTACATCCAAGGTGTATGGAAACAAGAAGATCATCATGATTAAATCAGAAGAGCCGATAGAGGTAGACAACTTGATGAGTCAAGAACTGAACAATATTTTAAACTCGAGTGAGAACGTGGTTAAAATGCAAGAGAACATGTTGACCAATCTCAGTCAGGTTTCCACCGTTTGCGGCAGTCCAGAAATAAAGATGGAAAATGAGAGCTCGACCGAGGATATGAGTCAAGGAGCGAGGAAAGCTCAAGAACCACCAAAAGTTGTCGACGATCCGAGCCACGATTCTTTGCTGCATGATCTGCAGTTCGATGATAAAAGCGAAGATCCGATCGTCCAACTGCAAGCAGCGGCCTCCCAAGAAGCACAAGCAGCTTCGGAACATCCTTCCAGCACTGATGTCGGACACCCGGATGCTGCCTTGTTGGACGAACCAAACGCTACCACGGCTGGGCATGACTTTTCAGGCGCTAATTCCTCCTTAAACAATCAGAAATCGGAAGCAGCAAATCTCGATGATTCCGTCATCGTCATACCGGATGAAACCATCGACCTGAACGAAGCTAACGAGAGCCAAGACAGCATTGAAGATAAATTATCGCAGCTCGACAGCTAA
Protein Sequence: MENRPAPLRSRRVCRFCLTESEPLSFIYERDHSKPFQVPLTLQIMSCVAIEVYAADGMPQMICTICRWNLDRSYKFKIQCKKADEALRAYPVSGVLPRPFPPIPSNPPDVGNKRSAEQRSQSEQSKKAKIEENERRELRERERREQTEKQTDNSDHRDLYEDEQDGGSEGEQKNANEKDKRKLEPGEIRVHACDQCDKTFPVRQALLLHTQRAHRNHKCVKCDKVFYSKYDLSNHMSTHTDDKSFTCTICHKQFARLNLLQRHEKVHHQNELRYGCQHCDREFFSTSELEKHEEIAHKTSKPYPCNICNKTFTYRHGLERHELLHIDDKTFPCEYCKQAFRSSTKLARHLSTHPAHRPYVCELCPRTFLLSHHLTRHMRTHSVEKPHVCEECGKAFKRKESLDVHQLTHAKRGMGLTCEICQESCRNRADYVIHIKQHIEAGEKMGPDGLRPDPRKDKIDSDSEEEEETYTDGDDNDYEPPAHLAKMVPKIELPESEDDPEKSDRKEHVVYVRNADGNVVKKTIKTLMPIHRREIQDNKTRSTSSSSPAPKSTPAKSDNRNVASDNDATPKIRSQYRVDDTEAEVQKIVASVFKEHKIPLKHQNIPQDQSSKDSPSATPSSQGQSRPQQGSSNQTPKEDGPKSDAATATPKSVNTVKVIKRIVVRKPLGSTEAAQAMASSAKETEGNAPKVTKRVIVRRIIRHGDTTREVILNPDGTMLDAAELAKLPTRNVVKRVIVKKPREKTETQSPEQQSKAGNADGKSAESKFELKSSQSATETPRTSQRPSSPAQKRSETTKTPKKNENQGRNNEMNDENPETTKEKLEKLEKRVEQQRLKIEELQARKLQEMDISEDILPERHDESEEEQQLPLKRVFVKRKQSIYDEEQEYDSEDGGPLVLKDEPIEEAPAAEPQTKDYKKPVVTSTSKVYGNKKIIMIKSEEPIEVDNLMSQELNNILNSSENVVKMQENMLTNLSQVSTVCGSPEIKMENESSTEDMSQGARKAQEPPKVVDDPSHDSLLHDLQFDDKSEDPIVQLQAAASQEAQAASEHPSSTDVGHPDAALLDEPNATTAGHDFSGANSSLNNQKSEAANLDDSVIVIPDETIDLNEANESQDSIEDKLSQLDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -