Basic Information

Insect: Arge pagana
Gene Symbol: -
Assembly: GCA_963969455.1
Location: OZ018310.1:25553395-25556780[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.02 1.5 9.4 3.6 1 21 358 378 358 381 0.94

2 19 1.6 1.2e+02 3.4 0.2 2 23 407 428 406 428 0.89

3 19 0.013 1 10.0 1.8 1 23 436 459 436 459 0.91

4 19 2.6e-05 0.002 18.5 1.4 1 23 465 489 465 489 0.91

5 19 0.49 37 5.0 0.3 2 23 521 542 520 542 0.91

6 19 0.062 4.7 7.9 0.7 2 23 551 573 550 573 0.93

7 19 0.00045 0.034 14.6 3.0 1 22 579 600 579 603 0.90

8 19 0.00067 0.05 14.0 6.6 1 23 687 709 687 709 0.98

9 19 0.0082 0.61 10.6 0.3 1 23 716 739 716 739 0.92

10 19 7.9e-05 0.006 17.0 2.1 1 23 745 767 745 767 0.98

11 19 0.00054 0.041 14.3 2.1 1 23 773 795 773 795 0.97

12 19 3.1e-06 0.00023 21.4 0.6 1 23 801 823 801 823 0.97

13 19 0.92 69 4.2 0.6 1 23 836 859 836 859 0.94

14 19 0.0001 0.0076 16.6 3.7 1 23 875 898 875 898 0.96

15 19 0.025 1.9 9.1 3.1 1 23 906 929 906 929 0.95

16 19 4.5e-05 0.0034 17.7 1.6 1 23 935 957 935 957 0.98

17 19 0.022 1.7 9.2 4.9 1 23 963 985 963 985 0.98

18 19 0.0014 0.1 13.1 4.4 1 23 991 1014 991 1014 0.98

19 19 0.049 3.7 8.2 5.6 1 23 1020 1042 1020 1042 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.02	1.5	9.4	3.6	1	21	358	378	358	381	0.94
2	19	1.6	1.2e+02	3.4	0.2	2	23	407	428	406	428	0.89
3	19	0.013	1	10.0	1.8	1	23	436	459	436	459	0.91
4	19	2.6e-05	0.002	18.5	1.4	1	23	465	489	465	489	0.91
5	19	0.49	37	5.0	0.3	2	23	521	542	520	542	0.91
6	19	0.062	4.7	7.9	0.7	2	23	551	573	550	573	0.93
7	19	0.00045	0.034	14.6	3.0	1	22	579	600	579	603	0.90
8	19	0.00067	0.05	14.0	6.6	1	23	687	709	687	709	0.98
9	19	0.0082	0.61	10.6	0.3	1	23	716	739	716	739	0.92
10	19	7.9e-05	0.006	17.0	2.1	1	23	745	767	745	767	0.98
11	19	0.00054	0.041	14.3	2.1	1	23	773	795	773	795	0.97
12	19	3.1e-06	0.00023	21.4	0.6	1	23	801	823	801	823	0.97
13	19	0.92	69	4.2	0.6	1	23	836	859	836	859	0.94
14	19	0.0001	0.0076	16.6	3.7	1	23	875	898	875	898	0.96
15	19	0.025	1.9	9.1	3.1	1	23	906	929	906	929	0.95
16	19	4.5e-05	0.0034	17.7	1.6	1	23	935	957	935	957	0.98
17	19	0.022	1.7	9.2	4.9	1	23	963	985	963	985	0.98
18	19	0.0014	0.1	13.1	4.4	1	23	991	1014	991	1014	0.98
19	19	0.049	3.7	8.2	5.6	1	23	1020	1042	1020	1042	0.97

Sequence Information

Coding Sequence: ATGAATCTTGCACCAGCAACGGATGGAACATTTGGAGATCCGAGCGCGAAGctatctcaaaatcatttaaaCTTTAATACAATGGCTGCGCAAGCAAACATCACATCTGCAACGTCTGATACCATGGTAGAAAAACCGTCGAATATCGAAGACGAAATAGTCGAGTTTGTTCTGCCAGATCTACCGGAATCGGAAACAGCATTATGCACCAGTTCTATGTGTCGTCTTTGCGGGATCAAAAGTGAAGAAGCAACACGGACGCTGACAGACCTGCGAGATATCACcacaaaaataaacaatctAATCCCGTTGTCTATATTGCAAACGGACCAGTTATCCAAATGCGTCTGTTCAACCTGCTGTGACAAGATAAATTTCATCAACGAATTTGTTATCACGTGCCAAGAGACTGAAAAAAACTTATCGACTATGGGGAAGTTGGTTATCAACGATAAATTGGACGGAGTCGAAACGGTTGTGATGCAAAAATGTCCAAATTGTAAAGTACATTTGACGATCACGAGGATATGTAGCGTGCCAAATTGCCAATGTTCGTCAAAGATCTCGTTGAAGGTTGCTGATAAAGTAACAACCGATTCGCGCGTAAGAAAGATTGCTGGGAGATCTCGTAATTTGGAACGTGTAAATAACGGCGGTGTCGTGACGCGACTTCGCAAATCGTCTGGTAGAAAAACTAGAGCCATTGACGGTGGCACGGAGAATAGGAGCAGCTTGCGAAAAAAAGGCGAACCTGTAATAGCtgtggaaaaaacgaattccgGGAGAATGAAACTCAGGGATATCAGAAAGAGGACGATGATCGGAGATACCCATGGCAATAACGAAGAATGCGTAAAGACGAGAAAGTTGGAGTCCGATGCGTTGCAAAATGCTTTGTTTTCTGTTGATTCTAGCCTGGAAGCAGCGAACATTACCGGAGAATTCGTAGAGTTGGAGATGCTAGATGACGAAGCGTCGACATTGAAATGCGAAGCTTGCCGCGTAAGATACTCAACCCGTGAAGAATATTTATTCCACGTGGAGCGTCATTCTTCGGGTAACCTGGAGGAATACTCGTGCGAAGTGTGTCATGAGAAATTTACCATGGAAAGCGCACTTTGGGAGCACCATAAATGTCTGCATTTGACGAACACAGATAAGTTGTACGATAAAATGAAGAAACTCCAAACTGAATGTACCCGCACGTTCATAAAATCGACCTGCGCAGAGTGCGGTGCTCGATTTGTGTTGCGCGAACGGTATGAGTTTCATATGGAAAGGCATAAAACGGGCAACATCAAATCATTTTCATGTATGATATGCGATAAGACGTTCAAAAGCGAAAATATACTTTGGGACCATCATCAGTATCAGCATAAGTTTGGTGAACGGTTCGCTTGCGGAACTTGCGACAAGACGTTCATCAAGAGTGCAAATTTAAACCATCATTTAAAGAGTTTCGGACACGAGGGGCGAAGGACCGTCGTCGCGTCAGATAGAACGCGACAAATCGACGAAATGGGGAAATTAACAGATGCTAACAAACCGAGGCCAAAAATAAAGTGTTCGGAATGCGACGCTCGTTTTGTACTCCAGGAGCGATACGAATTTCACATGGAAAGGCATAAATCCGGTCAAATGGAAGCTTGCGTCTGTACTTTGTGCGGCAAGGAATCTACCAACGAGAATGTGCTCTGGGATCATTATCAATACATGCACAAGAGAACAAAGCGATATGCTTGCACGACGTGTGGTAAACTTTTTCATAAACAATCAACACTGAATCGGCATCAGACAAGGTACGGTCATAAAGGGGCAAAGGAGATCGATGTGGAGACCGAGGGTAACATCGAGGCGGTCGACAGCGCAGCTTTCAAAAAAGTCGTAGCGGAGGAAGTTGTCGAGATGAAATCTGTGAACTGCGTACTCTGCGGTGTCGTAGTGTGGGGTGTAGATCCTAACTTGATAAATGACGCCGTGACTTGCACGAGCTGCGAAGGTCCAGGTCTATCGCTGCAAGTAGATTCGGATGGAACCAAAGTAATATCGCGAAGGCAGTACCATTGTAACATGTGCACGAAGCATTTCACGACCAAAGACAGACTGGAATATCACATCATGAGACATTCCGAGAATATGGATGAGTTTATTTGTAGTACCTGCGGCAAAGAATTGAGCACCGAGCAGGCTCTCTTCGAGCATTACCTGTTCGTTCACAAAGGTGCCAGGCCCCACGTTTGCGAATTGTGTGGCAAGTCGTATCAATTCAAAGCTCGTTTGAAAGAGCACATGCGAAGTCACAGCGGCGAGCGACCGTTCGCTTGTGAAATATGTGGCCAGAGATGTATGACAAACAATGCGTTGCGGTCCCACAAGAAAACTCACATCactgaaaaacgatttccCTGTGATATTTGCAAGAAAGCGTTCCGAAGACGGCAAGATCTCAACGAACATTTGGAAAGGCATTGGAAAAACGACAAGACGATGATGTTACCGCAAGTTTTTAATTGCGCTGTTTGCTCCGACATGTTTCCCACCTTTCGAATCTTGAAGAAACACATGAAAGAGAGTCACAGCGTCGAGGGTCAAGATCCTATGTTGTCCGGACTTCAGCCGTGGTTCGAATGCGAAGACTGTCACGAGAAATTCAAGCATCAAATGTCACTCAAAGTTCACAGGGAACGTGCACACGAGGGAAAAGCGAGACCTATACATCATTGCGACCTTTGCGACATAACATACAAAAATGCTCGTGTTCTTTCCACGCACATTAAAAATAAGCATCAAGGTGGAAAACGGTACAAATGCGCCCAGTGCGGTAAGGAGTACAATCAGTCTACGTCCCTCCACAATCACATTCTTCTTCACACCGGTGAGAAACCCTTCAGCTGCGAACATTGCGAGATGCAGTTCCGTACCAAAGAGTCGCGCGACTATCATCAACGAAAACATACCGGCGAACGACCTTACAAATGTCCGAAATGCAACGAATGTTTTGCCACTACTACGCAAAGACGGGAACACAGGAAACGAGAACACGACGAAGGTAACACGCACCATTGTCCGGAATGCGGCAAGGCTTGTTTCGACGAACACGGAGTGAGAAGTCACCTGACTACTCATTTTGCAGACAGATCGAAAACTGTCCAGGAGAATTAG
Protein Sequence: MNLAPATDGTFGDPSAKLSQNHLNFNTMAAQANITSATSDTMVEKPSNIEDEIVEFVLPDLPESETALCTSSMCRLCGIKSEEATRTLTDLRDITTKINNLIPLSILQTDQLSKCVCSTCCDKINFINEFVITCQETEKNLSTMGKLVINDKLDGVETVVMQKCPNCKVHLTITRICSVPNCQCSSKISLKVADKVTTDSRVRKIAGRSRNLERVNNGGVVTRLRKSSGRKTRAIDGGTENRSSLRKKGEPVIAVEKTNSGRMKLRDIRKRTMIGDTHGNNEECVKTRKLESDALQNALFSVDSSLEAANITGEFVELEMLDDEASTLKCEACRVRYSTREEYLFHVERHSSGNLEEYSCEVCHEKFTMESALWEHHKCLHLTNTDKLYDKMKKLQTECTRTFIKSTCAECGARFVLRERYEFHMERHKTGNIKSFSCMICDKTFKSENILWDHHQYQHKFGERFACGTCDKTFIKSANLNHHLKSFGHEGRRTVVASDRTRQIDEMGKLTDANKPRPKIKCSECDARFVLQERYEFHMERHKSGQMEACVCTLCGKESTNENVLWDHYQYMHKRTKRYACTTCGKLFHKQSTLNRHQTRYGHKGAKEIDVETEGNIEAVDSAAFKKVVAEEVVEMKSVNCVLCGVVVWGVDPNLINDAVTCTSCEGPGLSLQVDSDGTKVISRRQYHCNMCTKHFTTKDRLEYHIMRHSENMDEFICSTCGKELSTEQALFEHYLFVHKGARPHVCELCGKSYQFKARLKEHMRSHSGERPFACEICGQRCMTNNALRSHKKTHITEKRFPCDICKKAFRRRQDLNEHLERHWKNDKTMMLPQVFNCAVCSDMFPTFRILKKHMKESHSVEGQDPMLSGLQPWFECEDCHEKFKHQMSLKVHRERAHEGKARPIHHCDLCDITYKNARVLSTHIKNKHQGGKRYKCAQCGKEYNQSTSLHNHILLHTGEKPFSCEHCEMQFRTKESRDYHQRKHTGERPYKCPKCNECFATTTQRREHRKREHDEGNTHHCPECGKACFDEHGVRSHLTTHFADRSKTVQEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -