Basic Information

Insect: Arge pagana
Gene Symbol: gtf3a
Assembly: GCA_963969455.1
Location: OZ018311.1:4843218-4847660[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.21 16 6.2 0.0 3 23 761 781 759 781 0.95

2 17 0.82 62 4.3 1.2 1 19 787 805 787 807 0.93

3 17 1 77 4.0 1.0 2 23 814 835 813 835 0.95

4 17 0.017 1.3 9.6 3.4 3 23 844 865 843 865 0.93

5 17 0.0039 0.3 11.6 2.1 1 23 872 895 872 895 0.95

6 17 9.6e-05 0.0073 16.7 0.7 1 23 901 924 901 924 0.94

7 17 2.7 2e+02 2.7 3.6 2 23 932 952 932 952 0.95

8 17 1.4e-07 1.1e-05 25.6 2.1 2 23 958 979 957 979 0.97

9 17 8.6e-07 6.5e-05 23.1 0.1 1 23 985 1007 985 1007 0.99

10 17 0.00064 0.048 14.1 2.1 2 23 1019 1041 1018 1041 0.95

11 17 0.001 0.078 13.4 1.6 1 23 1047 1070 1047 1070 0.96

12 17 0.0051 0.38 11.3 2.7 2 23 1092 1114 1091 1114 0.95

13 17 0.00014 0.011 16.2 0.6 2 23 1121 1143 1120 1143 0.96

14 17 3.9e-05 0.0029 17.9 1.0 2 23 1151 1172 1150 1172 0.96

15 17 0.0012 0.092 13.2 2.3 1 23 1178 1201 1178 1201 0.96

16 17 0.33 25 5.6 3.2 2 23 1208 1229 1207 1229 0.96

17 17 0.018 1.3 9.6 2.1 1 23 1235 1257 1235 1257 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.21	16	6.2	0.0	3	23	761	781	759	781	0.95
2	17	0.82	62	4.3	1.2	1	19	787	805	787	807	0.93
3	17	1	77	4.0	1.0	2	23	814	835	813	835	0.95
4	17	0.017	1.3	9.6	3.4	3	23	844	865	843	865	0.93
5	17	0.0039	0.3	11.6	2.1	1	23	872	895	872	895	0.95
6	17	9.6e-05	0.0073	16.7	0.7	1	23	901	924	901	924	0.94
7	17	2.7	2e+02	2.7	3.6	2	23	932	952	932	952	0.95
8	17	1.4e-07	1.1e-05	25.6	2.1	2	23	958	979	957	979	0.97
9	17	8.6e-07	6.5e-05	23.1	0.1	1	23	985	1007	985	1007	0.99
10	17	0.00064	0.048	14.1	2.1	2	23	1019	1041	1018	1041	0.95
11	17	0.001	0.078	13.4	1.6	1	23	1047	1070	1047	1070	0.96
12	17	0.0051	0.38	11.3	2.7	2	23	1092	1114	1091	1114	0.95
13	17	0.00014	0.011	16.2	0.6	2	23	1121	1143	1120	1143	0.96
14	17	3.9e-05	0.0029	17.9	1.0	2	23	1151	1172	1150	1172	0.96
15	17	0.0012	0.092	13.2	2.3	1	23	1178	1201	1178	1201	0.96
16	17	0.33	25	5.6	3.2	2	23	1208	1229	1207	1229	0.96
17	17	0.018	1.3	9.6	2.1	1	23	1235	1257	1235	1257	0.99

Sequence Information

Coding Sequence: ATGAGTGGCTCTGAGGGAGGTATATTATACTTCACTTGTGAAGACGAGAATGCCGGTGGTCATGCACTATCGAAAGGTTCTACAGGTCATTTAGAGGACCTGgacgattcaaaaaaaaaattagaggcGATACTACTAGGCACCGATACCGACGGTGTTACTGACCACGACTACAGTGATGTTATTAAGGAGAGCGATATGCATCCCCTGTCCAATATAGAAGATGGTACAATTATTATAGTACAAGATGAGGATGACGAAGAGCTTCCGATCTTCAATCCCACCAACGACTCAACGTTGAAGAATACGTCATTCAatcgtataaaaaatttgtcagAACTAAAGAAAGTAACGCCCCGGCTGAAGTTTCGTGGAAGCAAAGTTAGAGGATTaacagaattgaaaaaaattaattcccaGCTGCACGCTaatcgaacgagcgacgaaacaaaacaacaatTGAAAAAGTATTGTCGAACGTGCGCTGGGCTGAAGCTTCCCCTGGTCGATATATTCAGCGACAAAGGAATGCAAATGCGACTCAATCAGCAAATGAAACATTTAGAAGAAATAGATCAGAATGATAGTTTATCCACACAAATGTGCATGGATTGCATCTGCGATTTGAAAATGAGTTACAAATTTTTCATGCAAATCAAAAAGGCcgaatttaaattaaaatccataCATGCCGCGTTGGCCGAGGCTTGCAACACCGACGTCAAGCCGCAGAATTCAATCGTTAATCCACCCGATACGTGGAATGATTATCCCATCCAAGTTCAGAATGAAAATCATGATTATGTGGCTAAAAGGAATAAGAACCAATCTGCCAGCGATCAGTTCGGCACTTATTCACAGGCGACACATTTGCCCGTTTCCCAACTGAATAACGTTAAATTAAAAGAAGAACCAATGTCTACGTCCGAAACGGAATGCGCCGCAGATATGTTTGAAAATGTCAACGAAATACCTGGCAACGAGGACAACGAATCTATCGAAGAATTTGATCCTGATGATCCGTCGTTTAATCCTGATATCTCGGATTTCGCCGAATCCAATGACGAGGCCGAGATGTTAGGTTCTGAAAACTCGAAAAAGCCGCGGATTACACCAAAGAGCGATCAGACTGAAGTGTTGAATACGGCCGTGTATCAATATGACACCGCTCAGAATGCTTACGTCAAATATGAGGTTGAAGAAACTAGGGAAAATATATTGCATCCCATAAATGCTGTGAAAATGGAGGTACCCGATCCTGACGCAGCTGATGTCAAAAAACAACCGAacatcttaaaaaaaaaactttccacGTCGAGCGCGTCCAAAGGGAATTTAGGTCCGGAGGAGTCCAGTCAATTGCCAGAATCGAGTAAATCGAACGTGACGGACAAAATGTTACCAACATTGAACGTTGACGGCTCCTTGAGCATCGAGAGCAAAGGCGAAGATGGAATTATGTACGTGACAGTTAAGGGCTCTAAGCCGAACGAATTGCTTTTAGTGAAGGTAAAGAAGATGGATAAACATGGggaaagaaacgacgagaagaCTCCTGCCTCCGCTGTTATCGACATGAAACCGGTCGAcagaatgttgaaaaaatatgaggcGCTGAAAATGAAGGAGAAAGATTTATTTTCTGACATACACAGGAAACCTGATATCCGGGAACAAATAATAGAAGAGCAAATAGAGGAATAcaagagacgaagagaaataATACTTGGAAATAATATCACGAGCTTATCGAATGCGATGAAAACCGAAGACGGAAACACGAGGTACCACAAACGATACGCTCCCCGATCAATAGTAGAAACTGAGACGTCGAAGATCAAAGTATTGGAAGCAGATAACGAGGCGGAACCCAAAATTGATGAAAGTTCGAAGAATAGTATAAGTAGCAATACGGAAGGACAGGAATCCCAGGAAagcaacgttgaaaaatctggGGAATATTTGACCCAGTCAGCCGAACAACAACAGAAATGGGAGGACGTCAAGCAAAAGCACGAATCTTTGGAAAAAGATTTAGAAGACACCTGCCTGGAAGATAACCAGAATAAATTAGAAAGAATACTaggagaagagaataaaaacttggtggattttcaagaTTACTTGAAACAAAGAAAGATTGTGATTAACAGATTAAACGACGAGGACATTATTTCGTTATACGAGGATCGGAGTAATGCTATTCTGAGAAAGGCCTTGACCGAACCTACGGCAGAGTTGAATATAGAAGATTCCATATGTATCGATGACTACTTAGACTGCGACTATTGCCTCGAGTCGTTTCCTGCGCAGGAACTGCTCGACGATCACGAGAAGATCCACGATTACAAGATAATGCATTATTGCGAGGATTGTTTCACGGAATTCCCCACCAACAAAGCGAAAAAGAATCACAACATTGCATGTTTGAAGAAGTTGATTTGTAGCTATTGCAATTTGATGTTGGACTCCAAAGGAAAGAAGAGACAGCACGAACAGAAACATTGCGACAATATATATGGTCAGCTCTGCGATTgttgcggagaaaaattcaagCATCAAGGTACTCTGGATCAACATATCAAGACGCAGCACATGAGTTGGGAAAAAGTATTTCAATGTCCCAAATGTCCAAAAAAATTTGCTTTCAAACAAAAGCTCAGCTTTCACCTCAAGTCGGTACACACGACGATGAGAGCTTATTTGTGCGAAGACTGCGGTGCTGATTTCAAGAATCCAGCTAGTCTGCGACATCATAGAATTCGGAAACATCAGCCGGTTGGTAACAAGAGAGAATGCATGGTCTGTCATAAGATGGTCCCATTTTATAGCTTATCCAAACACATGCACACTCACAAAGCGTATACCATACAATGCCCGCACTGCGATAAGATGTTCAAAAATAGTTCGACGTTGAAGCAACACGTGAGGATTCACGAGGACCAGAGAGAATACCGATGTGACATTTGCGGAGTGGGCTTCAATCGGCGAGACGGATTAAGATTACACATGAGAGTGCACGAGAAAACGGACAGCAGAGGACTTAAGGAATGCTCGTGTCAAGTatgcggtgaaaaattcccaaaccATTCGATGTTGGTCATTCATAGAAACAGAGTCCACAAGGATGGAAGACAGTATACGTGTCACATCTGTAATCGATCGATGATCTCCCCGCGTTCCTTGGAGTGGCACATGTCTCACATACACAACGAAAGTCTTCCGGGTGAAACGAAGCCTGATGCCGATACGCCcagagaaaagaaacgagtgACCTGTTATCACTGCGACAAAACGTTCAAAACGGAGATGATCCTGAGGACTCACATTAAAAATACCCACGTGAAAAAAGATCCAATGAAATGCGAGGAGTGCGATCAGATTTTCACGTCCGAAGTTAGATTGAGGCACCATATGATGGTAGCGCACAACAGATTAGAGGGAACGTTGCCCTGTCCTCATTGTCCCAAACGATTTGTAAATCAGTTGAGATTGAAAACGCACATGATTTCGCATTCTGAGGAGAGGCCGTATACGTGCGAAATTTGCGGATTCAACCTGAAGACAAAAATACAGTTGATAAAACATCATCAAAATAGACATAGCGACGAGAGACCGTTGCAGTGTAGGTATTGTCCATGGAGGTGTAAACAGGTGAGCGCTCTCGTCTGTCACGAGAGGACTCACACCAACGAACGCCCGTATACCTGCAGTGTTTGTTTGCAACGCTTCAAGTACCTTGGTGATAAGAACAAACATGAAAGACGTCACGAAAGTCTGGGAGGTTCCGGATTCAAGAGGATAATCTCTGGTCGCAATACGAAACAACCAAAACTTCAACCGGACTATACTTCGTGCTCCGAACAGGATGCGGAGGAATTTGATCAGCATGTTCAAGTTCAATATAGCACGGAAGATCAATACGAAGAACAAGGCGAGGACCAAATGGATGATCAGTTCGAGGCTAAGTATGAAGGCGAAGAAGAGATGGTTAAATTCGAGGCTCAGACCATGGAGGGCAATTATGAGCAGAGTTACGAACAGGAGTACGAGGAGACCTCCAGAGAAGCTTCAGAGGGAGCTGAAATTATAATGAACATGGAAGATACGACTGTTTATACAGAAGAAGTGACGGCGGATAATCTAGAGGCGACGGAAATTATTACCGACGAAATAATGACCAACCAAATATTACAAACTGGGACCGTCGTTCATTTGCAACAACAGGACGACTCTGGAAAGATTCAAGTTATTCCTGTGATGTTGTCGTTGCCAGACTTGACCGATGCCAACACGGAGGTCAATCTCGCGACTGCTTCTATTATGTACAATAATTAA
Protein Sequence: MSGSEGGILYFTCEDENAGGHALSKGSTGHLEDLDDSKKKLEAILLGTDTDGVTDHDYSDVIKESDMHPLSNIEDGTIIIVQDEDDEELPIFNPTNDSTLKNTSFNRIKNLSELKKVTPRLKFRGSKVRGLTELKKINSQLHANRTSDETKQQLKKYCRTCAGLKLPLVDIFSDKGMQMRLNQQMKHLEEIDQNDSLSTQMCMDCICDLKMSYKFFMQIKKAEFKLKSIHAALAEACNTDVKPQNSIVNPPDTWNDYPIQVQNENHDYVAKRNKNQSASDQFGTYSQATHLPVSQLNNVKLKEEPMSTSETECAADMFENVNEIPGNEDNESIEEFDPDDPSFNPDISDFAESNDEAEMLGSENSKKPRITPKSDQTEVLNTAVYQYDTAQNAYVKYEVEETRENILHPINAVKMEVPDPDAADVKKQPNILKKKLSTSSASKGNLGPEESSQLPESSKSNVTDKMLPTLNVDGSLSIESKGEDGIMYVTVKGSKPNELLLVKVKKMDKHGERNDEKTPASAVIDMKPVDRMLKKYEALKMKEKDLFSDIHRKPDIREQIIEEQIEEYKRRREIILGNNITSLSNAMKTEDGNTRYHKRYAPRSIVETETSKIKVLEADNEAEPKIDESSKNSISSNTEGQESQESNVEKSGEYLTQSAEQQQKWEDVKQKHESLEKDLEDTCLEDNQNKLERILGEENKNLVDFQDYLKQRKIVINRLNDEDIISLYEDRSNAILRKALTEPTAELNIEDSICIDDYLDCDYCLESFPAQELLDDHEKIHDYKIMHYCEDCFTEFPTNKAKKNHNIACLKKLICSYCNLMLDSKGKKRQHEQKHCDNIYGQLCDCCGEKFKHQGTLDQHIKTQHMSWEKVFQCPKCPKKFAFKQKLSFHLKSVHTTMRAYLCEDCGADFKNPASLRHHRIRKHQPVGNKRECMVCHKMVPFYSLSKHMHTHKAYTIQCPHCDKMFKNSSTLKQHVRIHEDQREYRCDICGVGFNRRDGLRLHMRVHEKTDSRGLKECSCQVCGEKFPNHSMLVIHRNRVHKDGRQYTCHICNRSMISPRSLEWHMSHIHNESLPGETKPDADTPREKKRVTCYHCDKTFKTEMILRTHIKNTHVKKDPMKCEECDQIFTSEVRLRHHMMVAHNRLEGTLPCPHCPKRFVNQLRLKTHMISHSEERPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYTCSVCLQRFKYLGDKNKHERRHESLGGSGFKRIISGRNTKQPKLQPDYTSCSEQDAEEFDQHVQVQYSTEDQYEEQGEDQMDDQFEAKYEGEEEMVKFEAQTMEGNYEQSYEQEYEETSREASEGAEIIMNMEDTTVYTEEVTADNLEATEIITDEIMTNQILQTGTVVHLQQQDDSGKIQVIPVMLSLPDLTDANTEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -