Basic Information

Insect: Arge pagana
Gene Symbol: -
Assembly: GCA_963969455.1
Location: OZ018312.1:23211829-23221404[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.47 36 5.1 4.7 1 23 426 448 426 448 0.98

2 19 3 2.3e+02 2.5 3.6 1 21 454 474 454 477 0.95

3 19 0.0016 0.12 12.9 0.9 2 19 484 501 483 505 0.89

4 19 0.00088 0.066 13.7 2.9 1 23 511 533 511 533 0.97

5 19 0.00062 0.047 14.1 0.1 3 23 541 562 539 562 0.94

6 19 0.21 16 6.2 3.3 1 23 569 592 569 592 0.98

7 19 0.00019 0.015 15.7 2.1 1 23 596 618 596 618 0.96

8 19 0.0034 0.26 11.8 1.6 1 23 624 646 624 646 0.98

9 19 4.9e-05 0.0037 17.6 2.1 1 23 652 674 652 674 0.97

10 19 0.00025 0.019 15.4 0.1 1 17 679 695 679 696 0.92

11 19 1.2 88 3.8 0.3 2 15 1195 1208 1194 1213 0.80

12 19 9.4e-05 0.0071 16.7 0.5 1 23 1251 1273 1251 1273 0.98

13 19 0.039 2.9 8.5 5.3 1 23 1279 1301 1279 1301 0.98

14 19 0.00064 0.048 14.1 0.7 2 23 1308 1329 1307 1329 0.96

15 19 0.21 16 6.2 1.3 2 23 1336 1358 1335 1358 0.95

16 19 6.9e-05 0.0052 17.2 1.5 1 23 1362 1384 1362 1384 0.98

17 19 0.0029 0.22 12.0 0.9 1 23 1389 1411 1389 1411 0.98

18 19 2.2e-06 0.00016 21.9 0.6 1 23 1417 1439 1417 1439 0.98

19 19 0.00048 0.036 14.5 1.1 1 22 1444 1465 1444 1465 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.47	36	5.1	4.7	1	23	426	448	426	448	0.98
2	19	3	2.3e+02	2.5	3.6	1	21	454	474	454	477	0.95
3	19	0.0016	0.12	12.9	0.9	2	19	484	501	483	505	0.89
4	19	0.00088	0.066	13.7	2.9	1	23	511	533	511	533	0.97
5	19	0.00062	0.047	14.1	0.1	3	23	541	562	539	562	0.94
6	19	0.21	16	6.2	3.3	1	23	569	592	569	592	0.98
7	19	0.00019	0.015	15.7	2.1	1	23	596	618	596	618	0.96
8	19	0.0034	0.26	11.8	1.6	1	23	624	646	624	646	0.98
9	19	4.9e-05	0.0037	17.6	2.1	1	23	652	674	652	674	0.97
10	19	0.00025	0.019	15.4	0.1	1	17	679	695	679	696	0.92
11	19	1.2	88	3.8	0.3	2	15	1195	1208	1194	1213	0.80
12	19	9.4e-05	0.0071	16.7	0.5	1	23	1251	1273	1251	1273	0.98
13	19	0.039	2.9	8.5	5.3	1	23	1279	1301	1279	1301	0.98
14	19	0.00064	0.048	14.1	0.7	2	23	1308	1329	1307	1329	0.96
15	19	0.21	16	6.2	1.3	2	23	1336	1358	1335	1358	0.95
16	19	6.9e-05	0.0052	17.2	1.5	1	23	1362	1384	1362	1384	0.98
17	19	0.0029	0.22	12.0	0.9	1	23	1389	1411	1389	1411	0.98
18	19	2.2e-06	0.00016	21.9	0.6	1	23	1417	1439	1417	1439	0.98
19	19	0.00048	0.036	14.5	1.1	1	22	1444	1465	1444	1465	0.96

Sequence Information

Coding Sequence: ATGGAGCTGGGAGTTGAGGATGCTCAGATTTGTAGGCTTTGCGGCCAATGCGAAAGTATATACATCGATGTTTTCGGCGAGGAAGGGACCAAGAGATTTCTCggattgaaaattcattcgaagaTCAACATTCTGATAGATGAGAGGGACCCGCTACCCAAGGCGATCTGCGTTCAATGCCTGGGCAAGCTGGAATTCGTTTGCGATTTTCAGGAGGAATGTCTTCGCACGCAAGAACTGTTACGCGATCGTTTCAATCTGCCACCTCCCAGTGACATTGATGATGTCAAAGCAGAGGATACGTTTGTTTCTCAGacgaataacaataacattgaaaaaaaccgTAATCCTCCAGATGAAAACGACGTTCCAATGGTCGAGGAGCGACGAGAGGTGGTTGAAACATGTTCGAACGAAAAAGTATCCGATACTCAACAATCAGTGACACCGTCTACAATTTCCAAAGAGATTGATCCATTCGTCGACGTGACGAATGTCAGCGGGTCTAGTACGTCCATTGAGATTGCGAGCGTCGCTGTTCCGGTTGAAAACATTGCTGTTTCGGAGGATCCGATTTCAGAAATCCTCGTCGCCTCTATTACACGGAGCCCGAGTCCTCGTAATAGCGCACAAAATACTCGGTGGCTGAGGAGTAAAACTAGCACGGACAATGCTTTGTCGGAATTGGATGCTCAAAATCTGTACAACCACGCGCCAATTGCAAACAGATTGCGAAGTCacggaaataataattctgaTGGTATAATTCGCATTGGATCGAACACTTATCAAAATTTGGACAAACCTCCGGCGCAAAAGGAACCGGATATGATTCAAATTCCGACATCGACTTTGAATAAAGTTCTCAGTAGTATGGCTAATTCGCCGAATATGCAAGTTTCTGTGAAGGAATCGACGGATCGCAATGGCGAAAGCGAAGATATTAATTTTACGGTAGAGCTACGTAAGAAACAAAATACGGACTTCGTTACAGTTCTAGCAAAAGTGTTTCCGGATCAAGGTTCGTGCATGGTGGATCCAGGCATAGTAAAACTTTTGGAAAACCAGAATGGCTTGGAGATTCGAAGCATCGTTAACAAAGTTTTCAATCGCTCCGAATCCAAAACGGATGGTTCCTCGGATTGGACGGATTGCAACGACGTGCAAGATCGACTCGGTGTTACCCAAAATCCCGAAGAACTGTTCAAAATGGATGGCGAGgaaattcgcgtcgacgacAACATCGAGCACGTAACAACGGACAATCAATCGCGTTACGTTTGTCGACTCTGTCGCAAGAAGTATGAACGACGCGATAAATGCACCGTCCACGTAAAAACTCATTTAGGAATTAAACAGTTCGTTTGTACGCTTTGCTCAGCAAAATTTGTCTGCAAATCGGACGTGATAAAGCATATAAGATGTTCCCATACGAATCCAAGGCCTATTCAATGTTTGAAGTGTCCGAAACGATTCCGTTCCAAGTTCGATCTAACAGAACACGACAATGTTCATAAAGGTGTGAAGCCCTATGCTTGCCAAGACTGCGGTCAAAGCTATCACCATAAAGTCTCTTTGCAAATGCACGCCAAGTCTCATTTGCCCTCGCAAAATTTAGCATGCGAATACTGCGGCAAGGTATTTCCATTCCGCACAAGATTGTTAAGCCACATAGCTAGTGTACATTTAAAGgatcgtcgaaatttccgaTGCCACTTTTGTTACAATTTATATTCCAGTCTTTCCGTATTGAACGAACATATCAAAACGAGACATACAGCAACGCATACTTGCGAGACTTGCGGCAAGAAATTCAAAGTCGCATCCAAGTACAAAGCTCACGTGTTACAACATACCAATCCCAAACCCTTCGTCTGTCACGTTTGTAACAACAAATACGCTTCCAAAGCCTTCCTAAACGAACATCTTCTAAAACATGAAGGGGTCAGAAATCacgtttgccaaaaatgtgGCGCCACTTTTGCTCAAGCCAGTCACTTAGCTGCTCACAGACACGTTCATGGGGAGAAAAAGTACGCTTGTCCGGACTGCGGAAAGCGATTTAATCGCCAGGACAATATGAAAATTAGGGAAGACGATGGTTTATCAAAGATGGTGTGTATGCGGTGTATAGCTACGCTGGAATTCTTCTGCGACTTTTACGACAACTGTCATCGAGTTCAGCCGCAATCGTCGCAGAGGACAGAAAGTGtaacaaaattttccaagaGTGTCTCGTCCGCTGACTTAGAGTGCGACAAAGAAAATGCTCCACCTACGAACGATACGTGCGGTCGACCAAATGGAAGTTTCGCGTTCTCCGAAACGGATAATGTCTACGATTCTCGAGACATGGAACTGAATATCAAAAATAGTAATTCTACTGGTCAAGCCAAAAATCCATGTCCTTCTCGCACGAAGAGGAAGAATAGAAGGATTGAAACGAAAGTAACGCAACTCAAGTCATCGAACGACACCATAATCCAGTCTAATAGTAACGACGATAGCGTTGCTATGAATTTGTCCAAAGATTCGCTGCGCACCAATTCACCACCGAAAAGCAAAACTAAGTTAAACGCGAAAATTAACACTAGTAAAATTTCTATAGATGAGCTGGAGCCTCGAAAAGGTAGCACAAGCCCTAATATACCAAAAATTAATCTGAACCTTAGAGAAACAGACGAGAGTCACTCTGGTCCCAATAGAGAAGATCTCCCCGACTCTAAGGATAAAGCACGCGACAACTGTCTCGAATCAAGTTCCAAAAGATGTCAATCTACTGAAGATAATCATAGTAGGGACAGTTTGAGCCTGAAATCTAATAGTACAAATATATCTTTCTGTGAAAATgtaaagaaagaaaattcgaatggCTTGCAATTGAATTGTTCCGAAACGCCCGTTTACCCGGTAACAGTTTCAAATATCTGCGAGACGATCGATAAGCATCGAGCCGAAGTACAAAGTATGGATACGAATGTGACGGATGAAAAATTTATGGCAGAAAAATCAAAAGCAGTGCCAGTGATAGTGAAGCAAGAGAAAGTCGAGTATCAAGTTcctaaaatttcgaaaattacagAACCTGATCTCATAGCGCATATACCAAAGGGAGAAGAGATTTCAATGAATCGATctcaaaaatcaaacgaaaaatGCCTCGGTTTGGAGAGACAAGACAACGCAGCCACATCTGTTTCTTCCACCGAACCGAGCGTAGATAAACAGTCGATATCCAGAAAATCGGTTATCGAATCGGTGAAAACTACGCTAACAGACTCGGATGcctcgaggaaagaaaatgacgagaccAAACAGAACTTAAAGATAAATTcaccgataaaaaatgattcgaatcaAGGTTCACCGGAACAAATATCTCTGAAACCGAACAAAAGATCCGAGAGTTCGGAAAATTTTGAGGAGAGACGCAACAAAACCGAAGGGAAATTTGGGAAGCTCTCAGAATTAATGTCGAACGAGCAAAAAGAAATTATCGAATCATTGTATCACGTTAATATGCAGGTGGTCAACAACGATGAAGTGCGCAAGAACATAACATGCTCGAGCAAAGATAACGTCGAGTGCAACTTGTGCGGTATGACATACTCACGAATCGACAAATGTCAGGTACACGTGTGGGGCCATTTGAACATGAAACCGTATTGCTGCAAAGCGTGCGACTTCGTCACGTTAACTGTCAGCAATATTCGATGTCATATCCGAAAACGCCacttgaaaataaaaccaTTCCAATGTCATCTCTGCGAAAAAAACTACGTTACCGCCGTCCTGTTGGAAGAACATATTAATTCTCACACAGGTGCAAAACCGTACAAATGCAAACTCTGTGACTTTGCTTGCTCCAATCGTCAAACGTTGAGCTATCACAAAACAACACACAAGCCGGTCAAAgaCATATCCTGCGAGTTCTGTTCGAAGACGTTCTATTCGAAAGGGAGAATGCGAGCCCACATGTTGATACACAAGAAGGACAAAAGTCTCATGTGTAAATTGTGCTCGACCTATCTGTGCAACGCCGAAGCACTCGTCAAGCATTATCAAAAGCTTCATTCTCAGGATTACGTCTGCAATATCTGTGGGAGGAAAACAAAATCTAGTAAAGCTTTGCACCTACATCAAAATGTTCATGCCGTGGGTAAATACAAGTGCCCTGTATGTCCAAATGTTTACAAGAGTAGACATATTCTAAAGGAACACATTCTGAAGCACGAAGGAATCCGGAAATATAAATGTGATTTGTGCGATAAATCTTTCGGTCAGCAATCTCATGTCGCTGCTCACATGAGCGTTCACAAGGGAAAGagGTATCCATGCCCAGGCTGCAAGAAGTTGTTCAATCGACACGACAACATGAGAATGCATACGCGTCGTTGCGTAGCATTTCAATCTAATCCTGAGTTGGAAAATTTCTGGTCGAATCATAAAACCATTCCACCAGTCTCGATTATCGAAGATGATCCAATGATAAGTCCAAAGATACACGAGAGTGCTACACCGTTCCTCGACAAGGTGAATAATTTCACCTCGAAAGTAACGAATGAAATACTTCCAACTGAAAAGACTGATAATTTCCAAACCGAAGAGACCGAGTCCATTAATTATAAGGTATCCATCGGTAAGACTGATTATAATTCACTCGTTTCACGCGAATTTAAAGATTTCCGAAAATATGCTCAGCACAATGATGTCATTAGAATTGGCGAGGTCGATATATTTCCAACGCCGCAGCCAGTTATCGttgatattgaaaatgaaagcgCTATAACGATTACCGAAAACGTATTGAGACCTGAATGCTTTTAG
Protein Sequence: MELGVEDAQICRLCGQCESIYIDVFGEEGTKRFLGLKIHSKINILIDERDPLPKAICVQCLGKLEFVCDFQEECLRTQELLRDRFNLPPPSDIDDVKAEDTFVSQTNNNNIEKNRNPPDENDVPMVEERREVVETCSNEKVSDTQQSVTPSTISKEIDPFVDVTNVSGSSTSIEIASVAVPVENIAVSEDPISEILVASITRSPSPRNSAQNTRWLRSKTSTDNALSELDAQNLYNHAPIANRLRSHGNNNSDGIIRIGSNTYQNLDKPPAQKEPDMIQIPTSTLNKVLSSMANSPNMQVSVKESTDRNGESEDINFTVELRKKQNTDFVTVLAKVFPDQGSCMVDPGIVKLLENQNGLEIRSIVNKVFNRSESKTDGSSDWTDCNDVQDRLGVTQNPEELFKMDGEEIRVDDNIEHVTTDNQSRYVCRLCRKKYERRDKCTVHVKTHLGIKQFVCTLCSAKFVCKSDVIKHIRCSHTNPRPIQCLKCPKRFRSKFDLTEHDNVHKGVKPYACQDCGQSYHHKVSLQMHAKSHLPSQNLACEYCGKVFPFRTRLLSHIASVHLKDRRNFRCHFCYNLYSSLSVLNEHIKTRHTATHTCETCGKKFKVASKYKAHVLQHTNPKPFVCHVCNNKYASKAFLNEHLLKHEGVRNHVCQKCGATFAQASHLAAHRHVHGEKKYACPDCGKRFNRQDNMKIREDDGLSKMVCMRCIATLEFFCDFYDNCHRVQPQSSQRTESVTKFSKSVSSADLECDKENAPPTNDTCGRPNGSFAFSETDNVYDSRDMELNIKNSNSTGQAKNPCPSRTKRKNRRIETKVTQLKSSNDTIIQSNSNDDSVAMNLSKDSLRTNSPPKSKTKLNAKINTSKISIDELEPRKGSTSPNIPKINLNLRETDESHSGPNREDLPDSKDKARDNCLESSSKRCQSTEDNHSRDSLSLKSNSTNISFCENVKKENSNGLQLNCSETPVYPVTVSNICETIDKHRAEVQSMDTNVTDEKFMAEKSKAVPVIVKQEKVEYQVPKISKITEPDLIAHIPKGEEISMNRSQKSNEKCLGLERQDNAATSVSSTEPSVDKQSISRKSVIESVKTTLTDSDASRKENDETKQNLKINSPIKNDSNQGSPEQISLKPNKRSESSENFEERRNKTEGKFGKLSELMSNEQKEIIESLYHVNMQVVNNDEVRKNITCSSKDNVECNLCGMTYSRIDKCQVHVWGHLNMKPYCCKACDFVTLTVSNIRCHIRKRHLKIKPFQCHLCEKNYVTAVLLEEHINSHTGAKPYKCKLCDFACSNRQTLSYHKTTHKPVKDISCEFCSKTFYSKGRMRAHMLIHKKDKSLMCKLCSTYLCNAEALVKHYQKLHSQDYVCNICGRKTKSSKALHLHQNVHAVGKYKCPVCPNVYKSRHILKEHILKHEGIRKYKCDLCDKSFGQQSHVAAHMSVHKGKRYPCPGCKKLFNRHDNMRMHTRRCVAFQSNPELENFWSNHKTIPPVSIIEDDPMISPKIHESATPFLDKVNNFTSKVTNEILPTEKTDNFQTEETESINYKVSIGKTDYNSLVSREFKDFRKYAQHNDVIRIGEVDIFPTPQPVIVDIENESAITITENVLRPECF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -