Apag007273.1
Basic Information
- Insect
- Arge pagana
- Gene Symbol
- ZFX
- Assembly
- GCA_963969455.1
- Location
- OZ018310.1:18881246-18885451[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.7 1.3e+02 3.4 0.1 3 23 14 34 13 34 0.94 2 15 0.25 19 6.0 3.3 1 23 884 907 884 907 0.93 3 15 0.00013 0.01 16.2 3.0 2 23 984 1006 983 1007 0.95 4 15 0.01 0.77 10.3 0.4 2 23 1019 1040 1019 1040 0.98 5 15 1.8e-05 0.0014 19.0 2.3 2 23 1043 1064 1042 1064 0.97 6 15 0.013 0.95 10.0 0.3 1 23 1070 1092 1070 1092 0.95 7 15 2.6e-05 0.002 18.5 4.6 2 23 1099 1120 1098 1121 0.95 8 15 0.11 8.4 7.1 3.7 5 23 1134 1152 1133 1152 0.97 9 15 2.3e-05 0.0017 18.7 1.5 3 23 1159 1180 1158 1180 0.97 10 15 0.01 0.77 10.3 0.3 2 23 1196 1216 1195 1216 0.97 11 15 6.8e-05 0.0051 17.2 0.7 1 20 1222 1241 1222 1244 0.92 12 15 8.5e-05 0.0064 16.9 2.7 1 23 1252 1274 1252 1274 0.99 13 15 0.0024 0.18 12.3 3.2 1 23 1280 1302 1280 1302 0.97 14 15 2.4e-06 0.00018 21.7 3.9 1 23 1308 1330 1308 1330 0.99 15 15 0.00031 0.023 15.1 7.2 1 23 1336 1358 1336 1359 0.96
Sequence Information
- Coding Sequence
- ATGGATGCGATGAACTCCATGAGTGGCGGGGCAGTAGCCTGCCCTGTCTGCACGCTGTATCTTCGCGAGGGTATAAGCCTTCAAAAACATTTGGATACCCACCCTAAGGAGCAGGTTATCGAGGCTTTGATCAAAGCTAGTACATCGCCGGTGGGGGTCCAGGTTCCTTCCGCACCTGCCACAGCCGCGGCTGTAGCGCAACCGCAACAGCCTCCTCCGTTGCCAACAGCGACGAACCCAACCTCGTCGCACTCGCCGTATCCCATAGGTCCGGTGTTCGAATGTCCACCAATAGCTTCCATGATGCCGCCTCAATTTGCTTCGTTTAGCTATCAACAATTTGTCAACAATGGAACAATGATGATACCTCAGTACGCGATGGCACCGCAAGCCAATCAAATGATGCAGATGCTTTACAATCCGTACGGTGCGATGTACCAACAACAGCAAATACCAGCAGTCCAAATGATTGCTCCTGTATCAAACATGCAAACTCCGGCAAGAATGAGATCCATGGTATCTGTTGCTAGCGAAACTACCGCTAGATCCAATGTTGGGACTATGAACTCTGAAATGGAACCTAAGCAAATTTTACCAGAAATCGAAGTTGAATCTGAGGTTGACCAAGTCCTACCGGATGTACAACACTTGTCTCGGGAACCCCAGAATACAAATCAACACGAAACAGAGCAGGATAATCAGTTGAGGTTGGAACGAAGGCAGATAACCCAAAACCCTTCGCCATCCCCTCAGGATAACCGGCCCAACAACCAGATTAATTATCAAACTGCTGTGCAAAATTTGACTGCTACGGATGAGGAGGTTAGTGCCGACGTGGACAAAGAAGAGAGCGTTTTGCCTGACATAGAGGATGTTCAGTCCCCGAGATCAACGCCGCAGATACAACAAGTCACGATACACTATGACGATGCACAACAGATGCCAAATGGGGAACAGTTTACATCGTGTTACGGGATGAATGCTGGAAAAGGACACAATGTAGAAACTACAACCACAATTATAGACTCGGAAATGGAACCTCAACATGGAAACGAAGAACCTCAGAGAACTTCCGAGCAATGTACGAGATCTATTTGTCAAAATAATCAAGAAATTGTCATCAATGATCAACCAAAAAGTTCTACACATCCACCCGAAGTTGAACAACTCGAACGACTTCTCATTACAATTATGGAAACACAGTTCAACGCAGATTCTTTGAAACACAAAGAGGAATCGAGAGGGCAAGGGGAGAAGAATATGGAGGCCACGCTTCAAGTATCGAATGCAAATAGTCAAGAAAATGATAgggaaattttagattttagaaaaattgatcaagacgacgacgacaaatcCGTACAATTAGAATCCTGTGACGAGTACGAGGCTCATGCTGATTCTGATCCTTTATATAGTTATAAGAATAGCTTGTCGGCTCCGGCATCACCTGCTACGCGTCAACAACTTCAAAGGCGTCGAACCTATTCCATGAGATCGGAGCTGGGTTCCACTGAAAATCTCAGCTCGTATCCCATCGGCTTTGAAGCTACAACGTTGCAGCATGACGAGGATGAAGACGTAGATGGTAACGACAAACTAGATGACAACTTCAACGAAGAGGACATGGAGATCGAAGAAATTGCCAGCCCGCATACACCGTTTACTAAACATGACAATAGCGAGTGCATAAGATCTCATACCCCGTTGTCTACGATCAGTGGAATCTCTGGACTCAGAGTTCGAACGGATCTTAGTAAACCTTGTTCGCCAGCATCTGCGCACTCTTTTCATCACATGGACACGAACAGTCTGTGCGCAGAGGACGATGATGCGGATGACATATTAGATCCGGAGAGCGAAAAAGATCCAATTGATTGCTCACAATTGGAAAAAGAGGCGGCAGTAATGGAAAGTTTAAAGAACAATTTACAATCAAGTATATACGACCATAAATTACAACCAAATCACGTTTATCATCAATCAGTTATCACAGAAAATGTATCGTCTTTTCCAGTTGGTAATCATTCGCAAAAACCAATGATCATTCACGACACATATTCTATATCCAATTGCCGAAATACAGATAATCTATTAGATCTTTCGGAACCATCAGAAGCAACGACCAGCACTGATTCAAAGAACTTTCAATCAACAAAATCTATTATTCATAAACCGACCagtgaaattttgaatattaatGAAGATGCACATCCAGGTCCTATGAATGTACTAGAGTTCGACGGACTTCAAATATTAGTACCTAGTACTTTCGTTAGCGAGTCGTCGCAAAAAGCTGTCAGCGCGACTAGTCGACAATCCATGGCCAGTAGCGAAGGTGGAATCGAAGTTGACGAGGAAGTTAAGAGTGTGAGCATGCGAGCCGACGAGACTATGCCACCGAGAGGCGAATTATCCGAACAAGAAAGTAATGGTTGTCACGAACCGTCAGCGTGGCAGCTATACATGGGACAAGAGTCTTCGAGGATGTCGACTTCTTACGATCTGATGGCCCGTGAGAGTTGGGAAGAGTCCGAAGGATCGGACAATGAAATCGGAGGGCCTCTCCTGGATAGTCGTAGTCTGGCTACACACTTCACATCTAGTCTATTCTTAGATAGAGACAGAAAAACGCCAACGAAACGCATGTTCAAGTGTCCACATTGCACAGAAGTCTTCGATTGTCCAAAAGAGCGGCGAGTTCACACCAGTACCATCCACAAAGACGCAGGTCCTAGTGGTAGTCGAGATATGAACGAGCCAACCGAGGTGAAGGACATAAAGCTACTGGAAGGTCGAATGAACATGTTTGACGATATATTTGTTCCTACATCGCACGCGCAACAACCATTGTTGCATCAACTTCAACCAGCTCACAAGCCGGATCTGGCAAAGTTGGAGGTTGATCAGAAAGTAGACGGTCTTGTAATCCCAGTTTCCGTCGAAGTATCCTGTACTATATGTGGACAGCAATTCACAAGCGAGAAATCGCTCCAAATTCATCATCGGAGGGTCCATCATGGTGAAAGTACGAAACGGGTTCGAGAAAATGCAAAATGTCAAACGTGCAACGAAGAATTTCCATCGGTCGTTCTTTTCAACACCCATTTGAAGATTCATCCCCTCGAATGTGGACAAtgcgggaaatatttttatagaaaacaaaatttcaagttaCACATGAAAAGGCATCTGGGTATAAAGCCATTTCCATGCACGGTCTGCGACAAGGCTTTTTTGACGAAACAAAAGTTGGACGAACACACGAACGGACACACGGGTAATGCCCCCGTCAAATGTAATCTGTGCAACGAGACTTTCAAACGTTATTCGAATTTGACCCAACACAAAAACAGGCATCATTTAAACatcaagaaaaaattaaaagactACATATGCCATTGCGGCGAAGTGTTTCACACGAAAAAGAAACTGGCGTGGCACAAGGAGACGCACGACGAGAAACCAAAGGCGTGCACCTACTGCAACGAAAGATTCATCCACATGGCTAGCCTCACCAGACACATGCGACGAGCTCACAATCGCAGATTCGTACCAGATGCCcaaagagaaaacgagaacGTCGAATGTCCAATATGCAAGTGCATCTATCTGCGCTCGTCCCTGGCAGTCCATATGCGAGTCCACAACGGCGAGAGACCCTACGAGTGTCAGGTATGCTCCAAGGCGTTCAGCACCAAGTGGAACTTACAACTCCACAAATGGACGCATGCAGCACGGAGCACAAAACCATTTAAATGCAATCAATGCAGCGCCGCCTTCTATCGACATAGTGATTACACTGCTCACATGAACTCTCATCGAAATGTTAGGCCTTACACGTGTAATTATTGCGGGGCACAATTTATACGCAAGTACAATTGTCTACGCCACGTTAAAGAACACGAAGAGAACAAATCGTATACCTGCGATATTTGCAACAAGACTTTCCATCGGTCCTATTATCTCAAGGAACATTTGCGCGTCCATTCGGGCGCCAGACCTTATACGTGTCACATATGTGGCAAGTCGAGTAGCACCAAATCGAATCACAACAAACACGTGAGGATTCATCACGCGCGCGAGCCTGTGAATACGGAGAATTAA
- Protein Sequence
- MDAMNSMSGGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIKASTSPVGVQVPSAPATAAAVAQPQQPPPLPTATNPTSSHSPYPIGPVFECPPIASMMPPQFASFSYQQFVNNGTMMIPQYAMAPQANQMMQMLYNPYGAMYQQQQIPAVQMIAPVSNMQTPARMRSMVSVASETTARSNVGTMNSEMEPKQILPEIEVESEVDQVLPDVQHLSREPQNTNQHETEQDNQLRLERRQITQNPSPSPQDNRPNNQINYQTAVQNLTATDEEVSADVDKEESVLPDIEDVQSPRSTPQIQQVTIHYDDAQQMPNGEQFTSCYGMNAGKGHNVETTTTIIDSEMEPQHGNEEPQRTSEQCTRSICQNNQEIVINDQPKSSTHPPEVEQLERLLITIMETQFNADSLKHKEESRGQGEKNMEATLQVSNANSQENDREILDFRKIDQDDDDKSVQLESCDEYEAHADSDPLYSYKNSLSAPASPATRQQLQRRRTYSMRSELGSTENLSSYPIGFEATTLQHDEDEDVDGNDKLDDNFNEEDMEIEEIASPHTPFTKHDNSECIRSHTPLSTISGISGLRVRTDLSKPCSPASAHSFHHMDTNSLCAEDDDADDILDPESEKDPIDCSQLEKEAAVMESLKNNLQSSIYDHKLQPNHVYHQSVITENVSSFPVGNHSQKPMIIHDTYSISNCRNTDNLLDLSEPSEATTSTDSKNFQSTKSIIHKPTSEILNINEDAHPGPMNVLEFDGLQILVPSTFVSESSQKAVSATSRQSMASSEGGIEVDEEVKSVSMRADETMPPRGELSEQESNGCHEPSAWQLYMGQESSRMSTSYDLMARESWEESEGSDNEIGGPLLDSRSLATHFTSSLFLDRDRKTPTKRMFKCPHCTEVFDCPKERRVHTSTIHKDAGPSGSRDMNEPTEVKDIKLLEGRMNMFDDIFVPTSHAQQPLLHQLQPAHKPDLAKLEVDQKVDGLVIPVSVEVSCTICGQQFTSEKSLQIHHRRVHHGESTKRVRENAKCQTCNEEFPSVVLFNTHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFKRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRENENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKSYTCDICNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -