Basic Information

Insect: Arge pagana
Gene Symbol: -
Assembly: GCA_963969455.1
Location: OZ018312.1:20915985-20918515[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00028 0.021 15.2 3.9 1 23 227 249 227 249 0.98

2 11 0.0022 0.16 12.4 11.5 1 23 255 277 255 277 0.96

3 11 3.6e-06 0.00027 21.2 5.1 1 23 283 305 283 305 0.99

4 11 0.00045 0.034 14.6 1.6 1 23 311 333 311 333 0.95

5 11 2.8e-06 0.00021 21.5 1.3 1 23 339 361 339 361 0.97

6 11 2.9e-05 0.0022 18.3 1.1 1 23 367 389 367 389 0.97

7 11 0.00073 0.055 13.9 1.9 1 23 394 416 394 416 0.97

8 11 2.6e-05 0.0019 18.5 0.0 1 23 422 444 422 444 0.96

9 11 0.00014 0.01 16.2 0.1 2 23 456 477 455 477 0.96

10 11 1.7e-06 0.00013 22.2 2.0 1 23 543 565 543 565 0.97

11 11 2.8e-05 0.0021 18.4 4.6 1 23 575 597 575 597 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00028	0.021	15.2	3.9	1	23	227	249	227	249	0.98
2	11	0.0022	0.16	12.4	11.5	1	23	255	277	255	277	0.96
3	11	3.6e-06	0.00027	21.2	5.1	1	23	283	305	283	305	0.99
4	11	0.00045	0.034	14.6	1.6	1	23	311	333	311	333	0.95
5	11	2.8e-06	0.00021	21.5	1.3	1	23	339	361	339	361	0.97
6	11	2.9e-05	0.0022	18.3	1.1	1	23	367	389	367	389	0.97
7	11	0.00073	0.055	13.9	1.9	1	23	394	416	394	416	0.97
8	11	2.6e-05	0.0019	18.5	0.0	1	23	422	444	422	444	0.96
9	11	0.00014	0.01	16.2	0.1	2	23	456	477	455	477	0.96
10	11	1.7e-06	0.00013	22.2	2.0	1	23	543	565	543	565	0.97
11	11	2.8e-05	0.0021	18.4	4.6	1	23	575	597	575	597	0.97

Sequence Information

Coding Sequence: ATGTGCACGACGCCTGGAAATGCAGGTGCCGGATTTGGTTATCCCTGGTCGTTTGGCGGACCGGGCACAGATACACGAGAGAACAACCAAAGCGATCTAACAAGCAACATTAGTTACGCTGTTAATAACAATCAGGATCAAGGTTCCagtcaaaaaattcaagttgACGTCAAACCGACAAAGATAGTGAATACCACGCATCGCCGGCAAGTCTTTACTATGAATGAGAATTGTCAACAGACGCCGACTACTCATCATGGACATACTGTAGCTCAAAATCAAACTCACGGAGTACACGCTCGTGTAAAGAAGCATCACGATGTATTCTCAGTAACCTGTGACAAAGGTGGTTGTAACTGCGACGCGTCCCATTCAACGTCTACCCCTTCGCTGTTTCCAAATCCCTTAGTATTTACAACAGCCGACAAACACGCCATGAGTAAACACTTCATGACCCCGATTGGTCCGCTGCAGCTGACCGCCGAAGAGTGCAATGAAATATTAATGAAAAGGGCGGCAGCGGCTTCTAATCATGCCAATGCGAACAGCATTGCTACCAGCCAGACGGACACGACCGCTCACTTCGGTCACGTCCTCAGCCACGTCAATACCGTACAGATTGATACCAAGGTGAAACAGGATATGGGCAGCCAGGTTCGTGTACCGAAGGAACGACCCTACTCGTGCTCTGAATGCGGAAAGTCATTCCTCCTGAAGCATCATCTTACCACCCACGCTCGAGTGCATACCGGCGAACGTCCACATATTTGTCCCCACTGTGGCAAGAGCTTCGCGCACAAACACTGTTTACATACTCACCTACTGCTACACAGTTCCGAGCGACCTTACCAGTGCCCTGAGTGTAAAAAATCGTTCACGCTGAAACATCACCTGGTCACTCATACCCGCGTTCACACCAGAGAGCGACCGTTCGTATGCCAAGAATGCGGCAGAGCTTTTCCTCTGAAACGTCATCTAGTTACCCACAGTAAATTTCATTCGGGTGAACGACCTTTCGTTTGCGAAGAGTGCGGAGAATCCTTTTCTCAAAAGGACCACCTCGTGATGCATTCGCGATTTCACGGCAGCTTGCATCCGTTCGTGTGTCACGACTGTGGTGCTACGTTTCAGAGAAAGTTTGAGCTCGTCAATCACGGTAGACTGCATGGCAGAGTACCGCATTCTTGTACCGTTTGCGGTAAAGAATTTCTACAAAAGCGTACGCTTTTGGCCCACACCCGACTTCATACCGGTGAAACACCGTTTGCTTGTACTGTTTGCGGAGAAGCCTTTCCGCGCAAAGCTGATCTGGTCGCTCACTCCAAGATACACAACAACAGTACCGGTCCTGACGAGAAACCCTTAACGTGCAGGGAATGTGGTCTGGACTTCCCGAATCGCGAGGCTCTGACTCTACATTTGAGGCTACATTCTGGCGACAGGACTCTCGTAACCGATTTGTGCGGATTAGCTGCTGCCTTTCAGCAGACTCCCGGGCATTTCCTTACGCCCAATACCGGAGGAGCTCATCAGATGAACGGACCTATTGGTACACCTGGGGTAAGCCACATGCACGGTGCAACTCAAACGTCGCCACCAGTCGGCAGTGGTCCCAAACCCAAGCCTCATATCTGTCCGGACTGCGGCCGTGGATTCGCCCAGAAGCATGGACTCTCTCAGCATCAACGTCGTCACACGGATGGAAGTTGCCATATTCGATCGCACGTATGTGATAAGTGCGGCAAGgcatttttccaaaagaaCCACTTGTTGCTACATCAACGCCAACACATGGATCCACCACCGAGTTTGATTCGTCAGCAACAGCGACAAGCGGCTCAAGCTGCCGCCCAACAGGcccaacagcagcaacaacaacaacagcaatcTTGTACGGTTGACACAAAGTCGATACAATTACAAGCAATACAACAACAAGTGCAACAGGctcaacaacagcaacagcaacagcaacagcagcagcagcagcagcaagtCCAACAACAGCAAACTTGTACTGTTGACACGAAGTCGATACAATTACAAGCGATACAGCAACAAGTGCAACAGgctcaacaacaacagcagcaacagcagcagcagcagcagcagcaagtTCAACAGCAGCAAACTTGTACGGTTGACACAAAGTCAATACAACTTCAAGCGATACAGCAACAAGTTCAACAGGCCCAACAACAAGTTCAACAGGcccaacaacagcagcaacaagcACAGCAACAAgtccaacaacaacagcagcaacagcagcaacaagcGTGCACCGTTGATACGAAAGCAATACAATTGAACGTCACCATGTGA
Protein Sequence: MCTTPGNAGAGFGYPWSFGGPGTDTRENNQSDLTSNISYAVNNNQDQGSSQKIQVDVKPTKIVNTTHRRQVFTMNENCQQTPTTHHGHTVAQNQTHGVHARVKKHHDVFSVTCDKGGCNCDASHSTSTPSLFPNPLVFTTADKHAMSKHFMTPIGPLQLTAEECNEILMKRAAAASNHANANSIATSQTDTTAHFGHVLSHVNTVQIDTKVKQDMGSQVRVPKERPYSCSECGKSFLLKHHLTTHARVHTGERPHICPHCGKSFAHKHCLHTHLLLHSSERPYQCPECKKSFTLKHHLVTHTRVHTRERPFVCQECGRAFPLKRHLVTHSKFHSGERPFVCEECGESFSQKDHLVMHSRFHGSLHPFVCHDCGATFQRKFELVNHGRLHGRVPHSCTVCGKEFLQKRTLLAHTRLHTGETPFACTVCGEAFPRKADLVAHSKIHNNSTGPDEKPLTCRECGLDFPNREALTLHLRLHSGDRTLVTDLCGLAAAFQQTPGHFLTPNTGGAHQMNGPIGTPGVSHMHGATQTSPPVGSGPKPKPHICPDCGRGFAQKHGLSQHQRRHTDGSCHIRSHVCDKCGKAFFQKNHLLLHQRQHMDPPPSLIRQQQRQAAQAAAQQAQQQQQQQQQSCTVDTKSIQLQAIQQQVQQAQQQQQQQQQQQQQQQVQQQQTCTVDTKSIQLQAIQQQVQQAQQQQQQQQQQQQQQVQQQQTCTVDTKSIQLQAIQQQVQQAQQQVQQAQQQQQQAQQQVQQQQQQQQQQACTVDTKAIQLNVTM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01131010;
90% Identity: iTF_00174493;
80% Identity: -