Basic Information

Insect: Arge pagana
Gene Symbol: -
Assembly: GCA_963969455.1
Location: OZ018311.1:1628538-1632671[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.018 1.3 9.6 3.8 1 23 323 345 323 345 0.98

2 19 0.063 4.7 7.8 1.6 2 23 379 400 378 400 0.94

3 19 8e-06 0.0006 20.1 2.6 1 23 447 469 447 469 0.97

4 19 0.00088 0.067 13.7 0.4 2 23 473 494 472 494 0.97

5 19 4.2e-06 0.00032 21.0 1.7 2 23 540 561 539 561 0.97

6 19 0.00028 0.021 15.2 3.0 3 23 568 588 566 588 0.96

7 19 0.00055 0.041 14.3 0.8 1 21 594 614 594 618 0.92

8 19 0.00042 0.032 14.7 1.6 1 23 676 698 676 698 0.97

9 19 0.00019 0.014 15.8 4.8 1 23 729 751 729 751 0.97

10 19 0.00026 0.019 15.3 0.7 1 20 756 775 756 777 0.94

11 19 0.0005 0.038 14.4 0.4 2 23 788 809 788 809 0.97

12 19 1.2e-05 0.00089 19.6 0.7 2 23 848 869 847 869 0.97

13 19 2.4e-05 0.0018 18.6 1.6 1 23 874 896 874 896 0.95

14 19 7.2e-05 0.0054 17.1 2.0 1 23 902 924 902 924 0.98

15 19 4.2e-06 0.00032 21.0 0.4 1 23 940 962 940 962 0.95

16 19 3.5e-07 2.6e-05 24.4 0.6 1 23 968 990 968 990 0.99

17 19 3.7e-05 0.0028 18.0 0.2 1 23 996 1018 996 1018 0.97

18 19 0.00014 0.01 16.2 4.1 1 23 1024 1046 1024 1046 0.96

19 19 0.0098 0.74 10.4 0.4 1 20 1052 1071 1052 1073 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.018	1.3	9.6	3.8	1	23	323	345	323	345	0.98
2	19	0.063	4.7	7.8	1.6	2	23	379	400	378	400	0.94
3	19	8e-06	0.0006	20.1	2.6	1	23	447	469	447	469	0.97
4	19	0.00088	0.067	13.7	0.4	2	23	473	494	472	494	0.97
5	19	4.2e-06	0.00032	21.0	1.7	2	23	540	561	539	561	0.97
6	19	0.00028	0.021	15.2	3.0	3	23	568	588	566	588	0.96
7	19	0.00055	0.041	14.3	0.8	1	21	594	614	594	618	0.92
8	19	0.00042	0.032	14.7	1.6	1	23	676	698	676	698	0.97
9	19	0.00019	0.014	15.8	4.8	1	23	729	751	729	751	0.97
10	19	0.00026	0.019	15.3	0.7	1	20	756	775	756	777	0.94
11	19	0.0005	0.038	14.4	0.4	2	23	788	809	788	809	0.97
12	19	1.2e-05	0.00089	19.6	0.7	2	23	848	869	847	869	0.97
13	19	2.4e-05	0.0018	18.6	1.6	1	23	874	896	874	896	0.95
14	19	7.2e-05	0.0054	17.1	2.0	1	23	902	924	902	924	0.98
15	19	4.2e-06	0.00032	21.0	0.4	1	23	940	962	940	962	0.95
16	19	3.5e-07	2.6e-05	24.4	0.6	1	23	968	990	968	990	0.99
17	19	3.7e-05	0.0028	18.0	0.2	1	23	996	1018	996	1018	0.97
18	19	0.00014	0.01	16.2	4.1	1	23	1024	1046	1024	1046	0.96
19	19	0.0098	0.74	10.4	0.4	1	20	1052	1071	1052	1073	0.89

Sequence Information

Coding Sequence: ATGGACGCCGACGAGGTAAATACGGCCGAGTCTCCTCAGGACGAGGCAAATATCGAAACGTTCGTGGGAATATGTCGTGTTTGTTTGATCGGTagtgatgaaatgaaaagccTGTTCCTCGAAAATGAAGCCTCGTCACTGTCCACCAAAGCAATGAGCTTCACGAACGCAAAGATGGTACCGGGGGATGGCTTACCTGCTCAAGTATGCTCCGCGTGCGCGGAGAAATTGGAATCGGCTTACGAGTTCAAATTGCAAGTAGAACAAGCTGATAGTattcttcgagaaaaatacgtCACTTTGAGTATCAAAGAAGAACTGTTCTTCAACGAAGTAGAAGTTCATATGGAGTCCGAGCATACCAGCAACAGGGATGTTTCGAATAACGAAGAATCTCTAGACATGGTTGCAGGATACGGGACGGAATCGTTAGATGATGAGATAGCAGATGCAAAACCTACGCTCTTGAAGGACCATTTAGCACTCTTGCAAGTGGAAGAACTCGCCAAAGAAGTCGAGGAAACGTCGGATATGATGGAACTAGCAGAAAGTATggaggaaacgacgacgaatgttAATATCAGTCCTGGCGAGATCGTTACTCAGGAGCACGGTTACGTGGTGCTGCGACAGAGGTCTCCGTGCGATCTAGTTCCCGCGAAAACTGAACGCGAGTCGGTGGAAACAGCTGAAACTAATGCAAGAAACGATTCTGAGATCGAGGAAACAAAAGCACCCGTGGCAGAAGAGACAGAAGACAAATTAGATGTCGTTCTAAAAATTGAGAACGTGGAAAGTTTGCCGACCGACAACGTTGCCTCGACCGAGACGCGCAAGAGCAAGCGTAAGTCTGCACGAAGGGCGGCGATCATCGATCCTGAGTCTGATGTCGAAAGCtactttgaaaatttaaacCTAAGTTTGAgattgaaacaaaatcaaactGACAAGAGTGATACGGTTTATTACATGTGTTACATTTGTGACAAACATTTTCTGTCTAAGGGTGTATTGAAGGAACACATGCATTCGCACGAAGAGGTGAGAAAAACTCTGTCTCTGGTTCAACCTCCGGCGAAACAACAGAAACCTGCGGTGACGCCGAAGCATTCTCCATCCGGAAAACAACCCAACAAATGTCCTCATTGTGGAAAAGAATACCTGTACGTTATTTCGTATAACAAGCATCTGAAGCAGCACGAGAACGAAAAACAGGAACCAAAGGAGGAACCCATGCCTCTGGAAGTTTCATTTCACGAAGACGACAACACGCTGGACTTTGACACGAACGAAAATGCTTATTATTCCGATACCGAAATCGAGGAAGAGAACGAGGAACACGTATGCGCGAAGTGTAACGAGAGTTTTAGGTCCAGCAAGGATCTACGGAAACACATGTTGAACCATGAAACGATGAAGTGCAAAATATGCGAAGAAGAGTTCGAGGGCCCGGGGAATCTGAAGGATCATCACGCCAAACACGTGGCTGAAGGCGCTATGACCGAAGTGGATATGGAAAATGATATGAAGAGCATAGAAAAGTTGGAGGAGGATGAAGAATTGGTCGAGGTTACGCAAACGCGTATGAAAACTCGTAACTCGGATGCGAAGGGGTTGCAATGTCCTAAATGCCCGATGGTGTATTCTCACAAAAAATCCCTTTCCCGACACATGGAGACGCATACGGGCACCAAGTACGGATGCAAAGCTTGCAGTCAGCAGTTCACGAGAAAAGATCACCTGAGAAGGCACATGGAGCAGCACGCGCGGATGAAATCTTTCAAATGCACTCAATGTAACAAAACGTTTGGGAACGAGCTAACGCTGCGAAATCATTTGATAGCTACAAATCACAAGACTATCATCCGCGGCGAAGAGTATGACCCTAACAAACGTTTGAAGCGCGTGGCTGCCAAGGAGGCGCAAAAGATCATCGATAAAATCAAAACAGAGGACAGTTTCGACGACAACGAGAGCAGCGACGTCAGCGAGACGTCGTTCAGAAAATCACATGAAACTAAGGAATACGAATGTGCGACGTGTAACCGGAAGTGTGCCTCGAAACAGTCGCTGGCCAAGCACATGGAGTTACATATcaaagaggaaaaacgagagaaagaagTTAAGCGTGGATCGGACGACGATTCGGACTTTGATCCCGGATTGGATTGGCCGATGGACAATCACGAGTGCTCGACGTGCAAGAAGAGGTATAGTACGAAAAAGTCGTTGTTGCGACACCAACTGTTGCACGAGGAACCGAACTTCGAATGTGATATTTGCAACGTAAAGTTCTATCGCAAAGACAAACTCAAGGCTCATTACGACAAATGTTCGGAAAAGAATCCGGATCAAGTTCGAAAGTGTAATATTTGTGGGGATAGTTTTGAAAGTAACGATCTGCTGAAGGAGCACAGAGCAAGGCACGTGACGGAAGGTATTCTGACGGAAGACGACTTGAGAGACATAGAACCGCAAACGGATGCTCGAAAATCTGGGGAAAAGGTTACGAGAAAACGGAGAACGGATATCGTTGGTCTGGAGTGTACGGAATGTAATAAGAGATATACCTCGCGGAAAGGCTTGTTGCGTCACATACAAGTTCACGAGGGTAAAAAATATCTCTGTGATATTTGTCCAAAGAAATTTTATAGACGAGAACACCTGAAAATCCATGTGGCTAAACATAACATGATCAAACCGTACAAATGTGATCGCTGTACCAAGCGTTTTGCCAAAGAAGAACAGTTGAACAACCATTTATCGAAACACGAtaggaatttcaaaaaaactaaAGAAACCGATAGTTCCAAGAGATTTTTGTGCGAAATATGTTCCAAGAGTTTCACGCAGTCGACTACCCTCATCGCTCATTTAAGGGCACACAACGGAATAAAACCGTACGTCTGCGAAGTATGTTCAAGACCCTTCACGACGAATGCGTATTTGAAGATGCACATGAGAACGCATACGCAGGAGAGGCCATACATTTGTCAGTATTGTTCTCGAGCTTTTGCTCGTGCTGATACTCTAGCTAATCACTTGACATCGCATACCGGCGAAGCGAAGTACCACTGCAAATATTGTCCGAAAAACTTCAGACGATTGAAATCGTTGAAAGAACACGTCTTCATTCATACGGGACAGAGGCCCTACGCTTGCCCAACCTGCGACCGAAGGTTCAACAACAATGGTAGTCGATACGCTCACAGCAAGAGATGCAAGCAGAATTTAATTCAAACTCAAAACAAAGCTCAAAATCCTGTAACTCAAACGATGGTCCCCATGATTACCACTCAAGTCAACACAAATCCAGTTTGTAAGCCTCAGACTGTTAAAACAATTACTATCGCCAGACCGACCGACACGATAATAGCACAACACATTTTGCAACCGCAAGAAATCTTAATGCCCATAATATTGCCACTCACCGTTACCTTGGCAGATGTCGGTCAAGAAGTGATTCTTCCCGAAGGAACGAAAATTTTCACCACAACGTAA
Protein Sequence: MDADEVNTAESPQDEANIETFVGICRVCLIGSDEMKSLFLENEASSLSTKAMSFTNAKMVPGDGLPAQVCSACAEKLESAYEFKLQVEQADSILREKYVTLSIKEELFFNEVEVHMESEHTSNRDVSNNEESLDMVAGYGTESLDDEIADAKPTLLKDHLALLQVEELAKEVEETSDMMELAESMEETTTNVNISPGEIVTQEHGYVVLRQRSPCDLVPAKTERESVETAETNARNDSEIEETKAPVAEETEDKLDVVLKIENVESLPTDNVASTETRKSKRKSARRAAIIDPESDVESYFENLNLSLRLKQNQTDKSDTVYYMCYICDKHFLSKGVLKEHMHSHEEVRKTLSLVQPPAKQQKPAVTPKHSPSGKQPNKCPHCGKEYLYVISYNKHLKQHENEKQEPKEEPMPLEVSFHEDDNTLDFDTNENAYYSDTEIEEENEEHVCAKCNESFRSSKDLRKHMLNHETMKCKICEEEFEGPGNLKDHHAKHVAEGAMTEVDMENDMKSIEKLEEDEELVEVTQTRMKTRNSDAKGLQCPKCPMVYSHKKSLSRHMETHTGTKYGCKACSQQFTRKDHLRRHMEQHARMKSFKCTQCNKTFGNELTLRNHLIATNHKTIIRGEEYDPNKRLKRVAAKEAQKIIDKIKTEDSFDDNESSDVSETSFRKSHETKEYECATCNRKCASKQSLAKHMELHIKEEKREKEVKRGSDDDSDFDPGLDWPMDNHECSTCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFESNDLLKEHRARHVTEGILTEDDLRDIEPQTDARKSGEKVTRKRRTDIVGLECTECNKRYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCDRCTKRFAKEEQLNNHLSKHDRNFKKTKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNLIQTQNKAQNPVTQTMVPMITTQVNTNPVCKPQTVKTITIARPTDTIIAQHILQPQEILMPIILPLTVTLADVGQEVILPEGTKIFTTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -