Basic Information

Insect: Arge pagana
Gene Symbol: -
Assembly: GCA_963969455.1
Location: OZ018315.1:4178776-4187982[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 9.7e-05 0.0073 16.7 1.4 1 23 486 508 486 508 0.96

2 18 7.2e-06 0.00054 20.2 1.6 1 20 514 533 514 536 0.94

3 18 3.2e-05 0.0024 18.2 0.7 1 23 542 564 542 564 0.98

4 18 7.9e-05 0.0059 17.0 4.4 1 21 570 590 570 592 0.95

5 18 2.4e-05 0.0018 18.6 4.6 1 23 598 620 598 620 0.99

6 18 2.4e-05 0.0018 18.6 5.3 1 23 626 648 626 648 0.97

7 18 5.9e-07 4.4e-05 23.7 4.9 1 23 654 676 654 676 0.98

8 18 9e-08 6.8e-06 26.2 2.7 1 23 682 704 682 704 0.98

9 18 6.7e-05 0.005 17.2 6.7 1 23 710 732 710 732 0.97

10 18 2.1e-05 0.0016 18.8 5.8 1 23 738 760 738 760 0.98

11 18 5.5e-07 4.1e-05 23.8 2.9 1 23 766 788 766 788 0.98

12 18 8.2e-06 0.00062 20.1 7.8 1 23 794 816 794 816 0.98

13 18 8e-06 0.0006 20.1 9.1 1 23 822 844 822 844 0.98

14 18 3.4e-05 0.0025 18.1 7.5 1 23 850 872 850 872 0.98

15 18 0.0016 0.12 12.8 8.8 1 21 878 898 878 900 0.94

16 18 1.2e-05 0.00093 19.5 0.4 1 23 906 928 906 928 0.98

17 18 0.03 2.2 8.9 4.5 1 23 938 960 938 960 0.98

18 18 4.8e-07 3.6e-05 23.9 1.3 1 23 966 988 966 988 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	9.7e-05	0.0073	16.7	1.4	1	23	486	508	486	508	0.96
2	18	7.2e-06	0.00054	20.2	1.6	1	20	514	533	514	536	0.94
3	18	3.2e-05	0.0024	18.2	0.7	1	23	542	564	542	564	0.98
4	18	7.9e-05	0.0059	17.0	4.4	1	21	570	590	570	592	0.95
5	18	2.4e-05	0.0018	18.6	4.6	1	23	598	620	598	620	0.99
6	18	2.4e-05	0.0018	18.6	5.3	1	23	626	648	626	648	0.97
7	18	5.9e-07	4.4e-05	23.7	4.9	1	23	654	676	654	676	0.98
8	18	9e-08	6.8e-06	26.2	2.7	1	23	682	704	682	704	0.98
9	18	6.7e-05	0.005	17.2	6.7	1	23	710	732	710	732	0.97
10	18	2.1e-05	0.0016	18.8	5.8	1	23	738	760	738	760	0.98
11	18	5.5e-07	4.1e-05	23.8	2.9	1	23	766	788	766	788	0.98
12	18	8.2e-06	0.00062	20.1	7.8	1	23	794	816	794	816	0.98
13	18	8e-06	0.0006	20.1	9.1	1	23	822	844	822	844	0.98
14	18	3.4e-05	0.0025	18.1	7.5	1	23	850	872	850	872	0.98
15	18	0.0016	0.12	12.8	8.8	1	21	878	898	878	900	0.94
16	18	1.2e-05	0.00093	19.5	0.4	1	23	906	928	906	928	0.98
17	18	0.03	2.2	8.9	4.5	1	23	938	960	938	960	0.98
18	18	4.8e-07	3.6e-05	23.9	1.3	1	23	966	988	966	988	0.97

Sequence Information

Coding Sequence: ATGAACGGTGAGCAGCATGCAGTGCCAGCGTCTTCGCAGGGGCAGCAAGAGGAAGTAATCGTGGGTCAAAGTGGTCGCCCTTCATATCCCAGTGGATTGGCCACTGGATCTGGTCTTGGGAATCTAGGGAGTATCCCACATTCGTCGGCAGATCTGCGTGTAGGTACAGCAGTAGCCTTAGCCTCCTCGGTAGCTAAATATTGGGTCCTGACCAATCTGTTTCCTGGACCGCTGCCTCAGGTTTCGGTTTATCACCATTCCCACCATAATTCCTCGCACAGGAGTGGCGGGGGGGAATTGGCCAATAAGGAATCAGCATCTTCGTTATCCCAAGAAATGGCCTTGGCATCCAATTCTCATCAGCAGGCATCTACGTCGCATCATCATCAGCAAACCCCGCTTAATGGCAACAATCATCATAGTTCTCTGCACCCTAATGCACAGATTCCGGTATCGCTTCCGGGCTTAAACCTGGGAGGCAACCATATTCCTGCCAGTGTCAGTCATTTGCATGCTGCACATGCACAAATGCAACAACAAATGCAGTCCCAACAACAACAGCTGCatcagcaacagcaacaacaatcgCATCATCAGATGCAAAATCATCAAAATAGTCAAAATAGTGGGCATAGTCCTCAGAATCAACCCAGCAGAGATGAAAACAAAGTCAAAGATGAGGGTGGTAGTTGCACGACAGAGAGATGTAGTGATAATCAAGTACATTGCCAAGTCCAGTGTGATCTCCAGCTGCAACCACAGCCACCATCGGATATGCAACAAAGTTTactgcaacaacaacaacaacaacaacagcaacaacagcagcaacaacaacagcaacagcagcagcagcagcaacaacaacaacagcagcagcagcagcaacaacaacagcagcagcagcaacagcagcaacaacagcagcaacaacaacaacaacagcagcagcagcaacaacagcaaatTGGCGTCAATATCACTGGAAACACTGCACCAGACAACACCAATCAAAATAATCCTGATGGGATGAAAACTGAAAAGGATAAAGATTTGCGCCAGCATAGTATGGCACAATTTCAATTGCCAGATTTGAAACCTGGTGGCCATATGATGGATGTTAGAACTGCTGATGGTTCGGTTGTAAAAATTAGTGCTGGTAGTGAACAGGATCTTGCTAAGACACTGGGTGTTGAAATGGTACAAAATATGTACAAGGTCAACGTTGAGGATATAAATCAACTTCTAGCATACCATGaggtttttggaaaattgcaaaGTGAAATAGCAGCTGGTACAACCCTAGTGGGAGGTACTGTACCTACTCAAACTGTCACCACAATACAAAATGGGACGCCTATTGTGCAACAAGTGCAgctaaataaatttgatataAAAACGAGTGATGGAGAAGCAACTCCGGGACCAAGCGCATCTCCTGTATCTGTTGGGAGTCACGCGTGCGAAGTATGTGGAAAGATATTCCAATTTCGATACCAGCTTATCGTACATCGAAGATATCACACGGAACGCAAACCATTTACGTGCCAGgTTTGCGGTAAAGCCTTCACAAATGCAGATGATCTTACGCGCCATGGCAAATGTCATCTTGGTGGATCCATGTTCACATGTGCTGTATGTTTTCATGTATTTGCCAATGCGCCGTCGTTAGAACGACATATGAAAAGACATGCTACTGATAAGCCCTACAACTGTACTGTCTGTGGGAAAAGTTTCGCCAGGAAGGAGCATTTGGATAACCATACACGATGTCATACCGGCGAAACGCCCTACAGATGCCAATATTGTGCAAAAACGTTCACACGTAAAGAGCATATGGTAAACCACGTCAGGAAGCATACAGGGGAAACTCCGCATCGCTGCGACATTTGCAAGAAAAGTTTTACAAGAAAAGAGCACTTTATGAACCACGTTATGTGGCATACCGGAGAAACACCACATCAGTGCCAAGTCTGTGGAAAGAAATATACGCGCAAAGAGCACTTAGCCAATCACATGCGCTCGCACACTAATGACACGCCCTTCCGTTGTGAAATTTGTGGTAAGTCGTTCACGCGGAAGGAACACTTCACGAACCACATCATGTGGCATACCGGAGAGACTCCGCATCGCTGTGACTTCTGTTCAAAGACGTTCACGCGGAAGGAGCATCTCTTGAATCACGTTCGCCAGCACACGGGTGAGTCTCCACATCGCTGCGGCTTCTGCTCCAAGTCGTTCACCAGAAAGGAACACCTTGTTAACCACATTCGCCAACACACAGGAGAGACGCCATTCCGCTGCCAGTACTGCCCAAAGGCATTCACACGTAAGGACCACTTGGTCAACCATGTTAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCGTTCACGCGGAAGGAACATTTGACCAATCACGTGCGTCAACATACAGGCGAATCGCCACATCGATGTCACTTCTGCTCCAAGTCATTTACTCGCAAGGAGCATCTGACCAATCATATTCGTATTCATACTGGCGAATCACCACATAGATGCGAGTTTTGTCAACGGACGTTCACAAGAAAAGAACATTTGAACAATCACCTCCGCCAACATACAGGCGAATCTTCACATTGTTGCAACGTCTGCTCTAAACCGTTCACCAGAAAGGAGCATCTGGTCAACCACATGCGATGTCATACCGGAGAACGCCCATTTGTATGTACGGAGTGCGGAAAGAGTTTCCCTCTCAAAGGAAACCTTTTGTTCCATATGCGATCGCACAACAAAGGAAGCAATGCGGAGCGACCATTCCGTTGTGACCTGTGCCCGAAGGATTTCATGTGCAAAGGTCATTTGGTCTCGCATAGACGATCCCATTCGGACGAACGACCGCATAGCTGCCCGGATTGTGGCAAGACTTTTGTAGAAAAAGGAAATATGTTGAGGCATTTGAGAAAGCATGCGGCGGAAGGACCGCCGACGCAAGTAGCCACTCCATCAGTCATTCCTCAGCCAGGAGTCCTACCAATTCCGACAGCTGCTGTTTTAGTTGGACATCCATTAGCGCCACCACCTGCGCCACCAGTCGTGCCTCAACATACCGTCGTTGTCCCGACACCCCCAGGAGTTCTAACATCTTATTGA
Protein Sequence: MNGEQHAVPASSQGQQEEVIVGQSGRPSYPSGLATGSGLGNLGSIPHSSADLRVGTAVALASSVAKYWVLTNLFPGPLPQVSVYHHSHHNSSHRSGGGELANKESASSLSQEMALASNSHQQASTSHHHQQTPLNGNNHHSSLHPNAQIPVSLPGLNLGGNHIPASVSHLHAAHAQMQQQMQSQQQQLHQQQQQQSHHQMQNHQNSQNSGHSPQNQPSRDENKVKDEGGSCTTERCSDNQVHCQVQCDLQLQPQPPSDMQQSLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQIGVNITGNTAPDNTNQNNPDGMKTEKDKDLRQHSMAQFQLPDLKPGGHMMDVRTADGSVVKISAGSEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGGTVPTQTVTTIQNGTPIVQQVQLNKFDIKTSDGEATPGPSASPVSVGSHACEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFTNADDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHQCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHIRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGESSHCCNVCSKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVATPSVIPQPGVLPIPTAAVLVGHPLAPPPAPPVVPQHTVVVPTPPGVLTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00899003;
90% Identity: -
80% Identity: -