Apag014894.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Arge pagana
Gene Symbol
ZNF236
Assembly
GCA_963969455.1
Location
OZ018315.1:4375542-4382255[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 0.00017 0.013 15.9 2.5 2 23 53 74 53 74 0.98
2 24 2.9e-06 0.00022 21.5 1.2 1 23 95 117 95 117 0.99
3 24 1.5e-05 0.0011 19.3 0.7 1 20 123 142 123 145 0.94
4 24 0.00032 0.024 15.1 1.1 1 23 151 174 151 174 0.95
5 24 3.3e-05 0.0024 18.2 2.9 1 23 183 206 183 206 0.98
6 24 1.1e-06 8.5e-05 22.8 0.7 1 23 321 343 321 343 0.98
7 24 7.3e-06 0.00055 20.2 0.6 1 23 349 371 349 371 0.99
8 24 0.031 2.4 8.8 3.0 1 23 377 399 377 399 0.97
9 24 1.3e-05 0.00094 19.5 2.8 1 23 405 427 405 427 0.98
10 24 0.00032 0.024 15.1 3.6 1 23 482 504 482 504 0.98
11 24 9.7e-07 7.3e-05 23.0 3.9 1 23 510 532 510 532 0.99
12 24 1.7e-05 0.0013 19.1 1.3 1 23 538 560 538 560 0.98
13 24 9.8e-05 0.0074 16.7 7.2 1 23 566 588 566 588 0.98
14 24 1.9e-05 0.0014 18.9 2.5 1 23 910 932 910 932 0.98
15 24 0.011 0.79 10.3 2.2 2 23 956 977 955 977 0.97
16 24 0.00039 0.029 14.8 3.2 1 23 983 1005 983 1005 0.99
17 24 0.013 0.95 10.0 0.4 2 23 1012 1033 1011 1033 0.94
18 24 5e-08 3.8e-06 27.0 1.4 2 23 1101 1122 1100 1122 0.98
19 24 0.059 4.4 7.9 8.0 1 23 1128 1150 1128 1150 0.98
20 24 0.00023 0.018 15.5 2.6 1 23 1156 1178 1156 1178 0.98
21 24 0.00042 0.032 14.7 2.3 1 23 1184 1206 1184 1206 0.98
22 24 0.00022 0.016 15.6 4.0 2 23 1452 1473 1452 1473 0.97
23 24 1.9e-05 0.0014 18.9 5.5 1 23 1479 1501 1479 1501 0.98
24 24 7.8e-07 5.9e-05 23.3 3.6 1 23 1507 1530 1507 1530 0.96

Sequence Information

Coding Sequence
ATGTCATTCACCGCTGAGTGTCTTAATTTCGCGTTGATCGTCATTTGTTCCCAAGTATTTCATTTCGCTCTTGGCCTTAGTGCTCTTTTTCACAAGGCGCAGCTCGATGCTCACTTGAAGCTTCATAATGACAAGTGGGCAACGGAGGACGTTAGAAAATGTAAACTGTGTCACAAACAGTTCACGCAACCAGCGCTTTATCGCCTTCATATTCGGGAACATTACAGGttacAAACGAAGCTGGTAAAGCAAACGAAGAGAGGTGTCGAACACAAAACTATGTACAAGTGTAAATTGTGtttaaaatcatttcaaaaacCAAGTCAATTAGTACGTCACATCAGGGTACACACAGGCGAGAAGCCTTTTCAGTGCACCATATGTACCCGAGCGTTCACGCAGAAGGGATCCCTCCAAATTCACATGTGGAAACATAACGGATTTAGACCTCACAATTGTAGTTCCTGCAACGCAAAATTTAGTCAGAAAGGCAATTTGAATGCTCATGTACTCCGAGTGCACAACGTTCCAGACGGTAAGCATTATTACAAATGTACATATTGTCCCTGCATCTTCAAGAAGTTAGGCAGTTTGAATGCTCACATGAAGAAAATGCACTCGAATCCAGTCAAGAGAACACAAAGTAGCGGAAGCACCAGCGAGGCCGACATGCAAGCTACAGTCGACACTGTAATGTCACAATTGGCCTCGCTCGAGTCGGATATTAAAAGTCCGGGAGATTCTGCGACGAATGAGGCATTACCAAATAAAGATATTTTGCAACAAGCATTGAAAAATAGCGGGTTACCTAGCAAAGAAAAGGAAGTTTCTACAGACACTGAAGCTCCTAAAAAAGGTGAAGCACAAACGACTTTCGTTACGTTATTAGACAGCTCAGTCGATAGTTCCACTAGAAAGTATATAACGATAAAGCAACGTAGTATAGGCAATATAAGATGGTATGCGTGTTCCTATTGCTACAAAGAATTCAAAAAACCATCTGACTTGATCCGTCATTTGCGTATTCATACTCAAGAAAAGCCATTCAAGTGTTCGTATTgtcctcgctcgttcgcggtCAAGTCAACTATGATAGCGCACGAGAGAACTCACAccggcgtgaaaaaatacatgTGCGGTAGTTGCAACAAAATGTTTGCCTGTCACAGCAGTCTCACGGCGCACGCTAGACTACACTCGGGTGTGAAATCTTTCACCTGCAATATATGCAACAAGTCGTTCGGTGCTAATCACCTATTGAAGAATCATATGAAATCTCACACGCATGGAAAACCAAAAACAAGTCCCGAAGCCGAAGTTCTCGCGCCCTCTATAGTTTTGGAGGAGCCGCTGTTGATTACGGATGcaggaaataaaattagtaTCGCTCAGGTTCAATCGAAACACCAGCAAGTTTACAATACCAACGACATGGCGAGACCTCACAAGTGTTGGGTGTGTCCAGCAGCATTCCGTAAAATTAGCCATCTAAAACAGCATTATCGAAGGCATACCGGGGAACGTCCATACAAATGTCAAAAGTGCAATAGGAGATTCACATCCAACAGCGTTCTCAAATCTCACATGAGAACTCACGAGGGATCGAGACCGTACGATTGTACGTTGTGTAGCGCAAAATTTTCAACTCAAAGCAGTATGAAGCGGCATATGGCAACGCATAGCAATAAAAGGCCATTCATGTGTCCTTATTGTCACAAAACATTCAAAACTTCGGTAAACTGTCGGAAACACATGAAAATCCACAAACAGGAAATAGCACAACAGCAATTGTCGCAACAACAACGGTTGCAGCAGCAGGAGCCATCGCAATCGTTGGAAGAAACAACAATTCCTGTATTGCCAGACCCTCTCGGGATGCCCGAGGAAATAGAAGTAGCATTTCAACCGCAAATGGCACCTGATTTCACTCAAGCATTTTCCGATCAGTTCCATACAATCACAGCGGATAAGGAAAAAATTCCTCAATCAAACGCAATGCCATCGATGGTTAACCAGATGTTGCCTGCCGTGCAACCAATTAATATAGCCTCTTCGCAAACACTCCATGCAGATGAAACTGGGACGATTACTTTGCCAAATTATTCCGGAGATCAAACGCTAACACCCGAAAGTATacgtgaaatcgaagaaactcTTAATCAACAGTTATTCAATATCGGGATGAATCTTGGACTTGGAAGTAATCTTACCAGACAAATGAACGAGACTTCCAGTTCCTTAGAAACCCGAGAACAACCTATTTTGAATATCATTTATGACAGCAGTAGGAATATCAACGCATCGACTAGCAACCCGATAAGCTCCACTTTGTTTGCACCCCAATTCGATACCTTCGACATGGACCAAATAAGTTTGCAGACAGATAATGAAATGGATATTGGTATTACGGCTGATAATTCTACGAGCATGGCTAGTATACTACCGCGATCAGCTCAAGAAGAACAACATTTGGTCTCCGTCAAGACAACCACCTCCTCGATAACAGAAGATAATCAGGTGAAACAACCAAGACATCTTATGGTCGTCAGTTCCATGCAAACCTGTCCTGAATTATCGCGGCCAGTGCAAGCCTGCccaaaatatttgaaagtCATTGCCAAAGCGGACACGACTGACAACTTGGACATCCAAGCACCCCCGGAAACTCTGAAAAATCAAACTCCATTGAAAACTCCTGCAATTAAGACTTCCGATCATCACTTGTCTTACGTATGCAATATCTGCGACCAACGCTTTCGTAAGTTGACTCAATTGAGAACTCATAGGAAAAGCCATTTCCTACCATCAGCAATAAAGATCGACGATACAAAGATTATTACACCTGTGGATCTGGAACCTTCGCTGCAATGTCACATGTGTCGTCAAACAGGTTTCACCGCTGATACTTTGAAaGAACATCTGAAGACTCACCGTGGAAATAAAGAATTTCAGTGTTCTGTATGTTTTCTGAAGTTTTGTACCAACGGGGGATTGAGTAGGCACTTAAAAATGCATGCAAACAAACTACAATGGAAATGTAACACGTGTAatctaatttttcaaagtaagACTCAGCTAATAATGCACGAAGAGTTACacgacaataatggtaattcGATCGCGGTAGAGCCCGACAGTTCCCAAAAAGAACCGTTAACCATAGATAGTAATTATTTGCCACAATCAACGATTCAACCGGAAAGTACTAGTGGACTCGTGGAGAAAATTGTTAGCGACGAGGGCGTTGAAAACGGTGACTCGACGACAAGTACCGGAAAAGCTAAGAAAGTTTATACGAACAAGTGTAAGTACTGTCcaaaaacatttcgaaaacCAAGCGATCTCGTGAGACATATCAGGACGCATACGGGTGAAAGACCTTATCAATGTGAATACTGTAATAAATGTTTTGCCGTGAAATGTACATTGGATTGTCACATGAAAGTTCACACAGGCAAGAAAACGTTTTCATGTCACGTTTGCACTAGTCTTTTCACTACGAAGGGCAGCCTCAAAGTACACATGCGATTGCACACAGGATCCAAACCTTTCAAGTGTCCCTCTTGTGATCTCAGATTCCGAACCTCGGGACACAGAAAAGTTCATGTATTGACCCACATGAGAGAACACAAAGATCCATTCAAATTTAAATTGAAACCACGCAAGGTCGCAGCCATTGCCGGTGTAGCCGCAGAGCTGGAAAAAGTAGTCGAGGCTGAAAATATAGAGACACCGCAAACGGAAACCAATGAATTTCCCAGCATAGATTCGATAACCATTGGTACGAATACCCTCGCGGACAACGTCACTCCTCACATAACATTTAACGCGGATGGAACAATTCTCAACAACAACGCGATGCTTTCGATAAATGAAAGTAACCAGCTAGTCGCTAATCTCCACTTTCTTCTCGCCAACGGGCTTGTTACCATTCAAACAGATCAGAGTCTCTTGCAGCACTTGCCAGAAACGGAAACAGTCGTTATGCAAGCAGATGCGAATGCCGACGAATTAATTGATTCCCAAACCCTGATTGATGGATCGGCAATGAACGGTTGTGCGCTGAATAATTCCACGCTGAACGATGCTACCTTAAACGATGCTACCCTTACTAATTCGTCGCTCCATGATTCTACGATAGATGATTCTACGCTGAACGATTCGACATTGAACGATTCGAATACCCAAGCAGTTTTGTACGAGACTGAGAGTACCACCAATGACGATCAGACTCATCAGACACTACAATTGAGTCACGATTTGCAATTGAACAGCGTCGAAGACGTGTTGAGGTTGGCTGTGAGGACAGagccagaaaaaaaagtagccaCTCCCACTAATCAATCTAGACGGGAATGCGACATATGCGGGAAAACATTTTGTAAACCATGTCAAGTTGAACGCCATAAGCGTATACATACCGGAGAGAGACCGTACAAATGTAATTTATGTTCAAAGTCTTTTACGCAGAAGAACACGTTGCAGGTACATCAAAAGCATCACACCGGCGACCGACCACACCCTTGTCCTCATTGCGACTACTCGTTCACGCAAAAGGGCAACTTGAAAACTCATTTGAAACGTGTTCACCAACTGGATACGGTTGAAGTCAAGAAATTACGAAGACGGCCGCAAGTACTAAGTGCTAAAATCACGCAGGATAACTTGGACGACGCGAGATTACTAGGCCTGAAAGATATCTCACTCATAGACATTTCTTGA
Protein Sequence
MSFTAECLNFALIVICSQVFHFALGLSALFHKAQLDAHLKLHNDKWATEDVRKCKLCHKQFTQPALYRLHIREHYRLQTKLVKQTKRGVEHKTMYKCKLCLKSFQKPSQLVRHIRVHTGEKPFQCTICTRAFTQKGSLQIHMWKHNGFRPHNCSSCNAKFSQKGNLNAHVLRVHNVPDGKHYYKCTYCPCIFKKLGSLNAHMKKMHSNPVKRTQSSGSTSEADMQATVDTVMSQLASLESDIKSPGDSATNEALPNKDILQQALKNSGLPSKEKEVSTDTEAPKKGEAQTTFVTLLDSSVDSSTRKYITIKQRSIGNIRWYACSYCYKEFKKPSDLIRHLRIHTQEKPFKCSYCPRSFAVKSTMIAHERTHTGVKKYMCGSCNKMFACHSSLTAHARLHSGVKSFTCNICNKSFGANHLLKNHMKSHTHGKPKTSPEAEVLAPSIVLEEPLLITDAGNKISIAQVQSKHQQVYNTNDMARPHKCWVCPAAFRKISHLKQHYRRHTGERPYKCQKCNRRFTSNSVLKSHMRTHEGSRPYDCTLCSAKFSTQSSMKRHMATHSNKRPFMCPYCHKTFKTSVNCRKHMKIHKQEIAQQQLSQQQRLQQQEPSQSLEETTIPVLPDPLGMPEEIEVAFQPQMAPDFTQAFSDQFHTITADKEKIPQSNAMPSMVNQMLPAVQPINIASSQTLHADETGTITLPNYSGDQTLTPESIREIEETLNQQLFNIGMNLGLGSNLTRQMNETSSSLETREQPILNIIYDSSRNINASTSNPISSTLFAPQFDTFDMDQISLQTDNEMDIGITADNSTSMASILPRSAQEEQHLVSVKTTTSSITEDNQVKQPRHLMVVSSMQTCPELSRPVQACPKYLKVIAKADTTDNLDIQAPPETLKNQTPLKTPAIKTSDHHLSYVCNICDQRFRKLTQLRTHRKSHFLPSAIKIDDTKIITPVDLEPSLQCHMCRQTGFTADTLKEHLKTHRGNKEFQCSVCFLKFCTNGGLSRHLKMHANKLQWKCNTCNLIFQSKTQLIMHEELHDNNGNSIAVEPDSSQKEPLTIDSNYLPQSTIQPESTSGLVEKIVSDEGVENGDSTTSTGKAKKVYTNKCKYCPKTFRKPSDLVRHIRTHTGERPYQCEYCNKCFAVKCTLDCHMKVHTGKKTFSCHVCTSLFTTKGSLKVHMRLHTGSKPFKCPSCDLRFRTSGHRKVHVLTHMREHKDPFKFKLKPRKVAAIAGVAAELEKVVEAENIETPQTETNEFPSIDSITIGTNTLADNVTPHITFNADGTILNNNAMLSINESNQLVANLHFLLANGLVTIQTDQSLLQHLPETETVVMQADANADELIDSQTLIDGSAMNGCALNNSTLNDATLNDATLTNSSLHDSTIDDSTLNDSTLNDSNTQAVLYETESTTNDDQTHQTLQLSHDLQLNSVEDVLRLAVRTEPEKKVATPTNQSRRECDICGKTFCKPCQVERHKRIHTGERPYKCNLCSKSFTQKNTLQVHQKHHTGDRPHPCPHCDYSFTQKGNLKTHLKRVHQLDTVEVKKLRRRPQVLSAKITQDNLDDARLLGLKDISLIDIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-