Basic Information

Insect: Arctopsyche grandis
Gene Symbol: stc
Assembly: GCA_029955255.1
Location: JARCGT010000003.1:6035763-6043428[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 2.8e+04 -4.3 1.6 15 19 468 472 467 472 0.81

2 13 0.056 7.8e+02 0.8 0.2 4 10 502 508 500 510 0.92

3 13 4.4e-06 0.061 14.0 11.7 3 18 517 532 515 533 0.92

4 13 3.7e-07 0.0051 17.4 12.4 3 19 571 587 569 587 0.91

5 13 1.9e-08 0.00027 21.5 15.5 1 18 628 645 628 646 0.97

6 13 5.5e-07 0.0076 16.9 16.0 1 19 688 710 688 710 0.90

7 13 0.0023 32 5.3 7.7 1 11 750 760 750 761 0.96

8 13 0.15 2.1e+03 -0.5 0.6 4 10 765 771 764 771 0.91

9 13 9.6e-09 0.00013 22.5 13.1 1 19 777 795 777 795 0.98

10 13 2 2.8e+04 -4.1 3.6 12 18 825 834 824 835 0.68

11 13 1.1 1.5e+04 -3.2 6.3 9 19 841 853 839 853 0.79

12 13 4.3e-08 0.00059 20.4 11.1 1 19 889 908 889 908 0.94

13 13 2 2.8e+04 -9.3 14.7 1 19 918 939 918 939 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	2.8e+04	-4.3	1.6	15	19	468	472	467	472	0.81
2	13	0.056	7.8e+02	0.8	0.2	4	10	502	508	500	510	0.92
3	13	4.4e-06	0.061	14.0	11.7	3	18	517	532	515	533	0.92
4	13	3.7e-07	0.0051	17.4	12.4	3	19	571	587	569	587	0.91
5	13	1.9e-08	0.00027	21.5	15.5	1	18	628	645	628	646	0.97
6	13	5.5e-07	0.0076	16.9	16.0	1	19	688	710	688	710	0.90
7	13	0.0023	32	5.3	7.7	1	11	750	760	750	761	0.96
8	13	0.15	2.1e+03	-0.5	0.6	4	10	765	771	764	771	0.91
9	13	9.6e-09	0.00013	22.5	13.1	1	19	777	795	777	795	0.98
10	13	2	2.8e+04	-4.1	3.6	12	18	825	834	824	835	0.68
11	13	1.1	1.5e+04	-3.2	6.3	9	19	841	853	839	853	0.79
12	13	4.3e-08	0.00059	20.4	11.1	1	19	889	908	889	908	0.94
13	13	2	2.8e+04	-9.3	14.7	1	19	918	939	918	939	0.93

Sequence Information

Coding Sequence: ATGGGGGAGTGGAACTACAACCAGTATCCTCCGGGTTACACGTGGACCAACAGCAGAGAGAATGCAGCCCAACAACCTGAATATTATCATCAACAACAGGGTAACAATGTGCCACAACAATACGTCGGTTTCCAAGACTTTCTCAGTCAATACCAACAGTCAAACTCGTATCAAACGTACTCAAACAACGGCTACCAAAATCAACAGCAATTTCCACAATATCCTAGAAATCCCGTAGACGTTCGTCATCAACAGTATCAGCAGCAGCAGAATTCCGAAACTAGACCAAGTAAAAAACATGAGAACTCTTCCACATCCGCCAGCAACTCGAGAGTGCCTTTTGAACCGATCCCCGATCAGCATCATCAAGGTGAGATACACGTCGATAACACAACCGATCAAGTAGCTTCGTCGTCACGTCACGAGAGCCATCGCCCGAGGAGACACGTCAATCATTCAGAAACAGCTTCAGGTAAAAACGTTGCCTCGAAGTCCAAATTGATGGCAACAGCTGTAGAATTCGTACCACAAGGTTCCAGAACTGATACAAAGACTTTCCACAATTCTAAAATTTCAATCCCGAATGGCTCTTCTGAATCCCGAGAGCCTTTCAATAGAAAAGATGATAAGTTTAATTCACCATCTCGCACTAATAATCAACCTAGACCGAAGAATAATCCCATAGCATCGAACGACTccaataaaaatacgaattggCGCAGGAGAGACAACAACGAGGAGCCGTCTCACTCGAATGCGTCCACACCAGTATCAGAAGATCACCAATTTGATGGAAACTATGGTGGCGAAAGCAACTATGCACAAAACTCGAGTAGTTCTAGTTCTAGATATAAAAAAGAGGCTTATCAAAATAGTAAACCGAAATACAATAACAGTGAAAGCAACATCACCGAaagtaacaaaaattataataacggTAGAGCTGCTAAGACATACAATTTGACGGGGAATCAGCGTCAAAGTGCCGAAAATGGCAATGGTAAATACCCACAACGGAAACAACAATCGTACAGTTCAAATGAAACATTCCGACAGAAAAACAACCACCGAAGAAACGACCAATACGTCAACAAGGAAAACTTTCAAGAGTCGGATGACTACGGCAATGGTTCAAGCAAGCATAAAAATAAAGCTCCCGCATCGGCGAAAAATATGAATAGGAAGGATTCTGAGGTCACAAAAGatatcGATGGTGCTAGTGTCTCCCAGAGAGAACGACTGATGGAACAGTTAGACAAGGGAGTATTGGAATGTCTAGTATGCTGCGAACGTATCCGACAAATAGATAGTGTTTGGTCTTGCGGCAATTGTTTCCATGTGCTGCATTTGAAGTGCATTAGCAAATGGGCTAGAAGTAGTATTGCAGAGGGAGTGTGGCGTTGTCCAGCATGCCAAAATAACAACTCAATCGTTCCAACTGATTACAAATGTTTCTGCGGCAAGCAAAACAATCCCGATTGGAAGAGAGGTGGTGACAGCGCTCACACCTGTGGCGACATTTGCGGCCGACTGCCACCCAGTTGTCTCCGACATCCTTGCACATTGTTGTGCCATGCAGGACCATGCCCACAATGCGACGCTGTCGTACAAAAaAAATGTGAATGCGGAGCCACATCTCAGTCCATGCGATGTTCTCACAACCAACCACTGCTCTGCGAAACCATCTGCAAGAAAACATTAAACTGTCAAGTCCACACGTGTGATGACAAATGCCACGCCGGATCATGCCAACCGTGTAAAGTCACCATTGATCAACaatGCTATTGTTCTAAGACTGAAAAGAGAACTCTGTCGTGTGATGCTGACTCTGTCGGCGTATCCAATTACAGCTGTTGTGGTGTCTGCGATAAGAAATTAACTTGTGGAAACCACAATTGTACTAGTATTTGTCATAGCGGACCATGTGACGAGTGCCACCTTTTGCCAGAGAACATTAAAAAGTGTCCTTGTGGACAAACTTTGTTAACATCAGAACAAAGACGAAATTCCTGTTTGGATCCAGTACCTTTGTGTGATAAAATATGTTCTAAAGTATTTAATTGTGGTCCACTTGAAGATAGACACAAGTGCAAAAGCTCATGTCATCATGGTAATTGTCCTCCATGTCCGGATAAAACTCTGGTGTCGTGCAGATGCGGACACATGAACAAGAATCTCAAGTGCGTCGAACTGGAGAACGAGAAAGACAACGTTAAGTGTGGTAGAAAGTGCTCCAAGAAACAATCGTGCGGACGACACCGTTGTAAAACCTTGTGCTGCATCGATACCGAACACAGATGCATGCTGCCCTGCAATCGATCACTCACCTGCGGTCTCCACCGCTGTGAAGACACATGTCATAATGGACATTGCGATCCTTGCTGGAGAACTAGTTTTGACGAATTACGGTGCCGGTGTGGTGAAGCTGTTAGGTATCCGCCAATCCCGTGTGGTACTCGTCCTCCAGCTTGCACTCAGCCGTGCCCCGTATCGAGGCCATGCAGCCATCCACCACTTCATGTCTGTCATCCTGCACCAACTGTGTGCCCGCCTTGTACAGTTCTCACTACTCGATATTGTCACGGACGTCACAAgatgCGTAAAACAATTCCATGTCATCAAGAGGAATTCTCATGCGGTCTACCATGCGGTAAAGAATTGTATTGTTCAAAACATAAATGCATTGAAATATGCCACAAAGGAAACTGTCCCACAACATGCTCACAACGGTGTGAAGTCGAAAGACCCGGATGTGGACATCCGTGTGGTGGTAGTTGCGGACATGCAAACCCTTGTCCAATTGTCACACCCTGCAGAAGACCCGTGCGTGTAACATGCTCGTGTGGAAGACGCACTACAACGAAACCATGTGCAGAGCACATGCGTGATCTTCAACGCTTACAAGCCAACGCGGGAATGTTGGCTGGAGCCATGGGTAAACCCATCGATATCAAGGAGTTGATTGCCAAAGGAAACACCACCACGACGTTGGAGTGTGACGATGAGTGTCAGATTGAAGAGCGCAATCGTAGATTGGCCATCGGACTTCAAATTCGCAATCCAGATCTGTCGGCCAAATTGACTCCACGCTATTCAGATTTTTTGAAACAGTTTGCCGTACGCGATGAAggtttttctaataaaatacaTGAAAAATTATCAGAACTTGTATTGTTGGCGCAAAAGTCGAAGCAGAAAACTCGTAGTCATTCGTTTCAACCGATGAACCATCAAAAGCGGCAGTTTGTACACGAAATGTGCGAACATTTCGGCTGTGATAGTGTAGCTTATGATACGGAACCATATAGAAACATTGTTGCTACAGCATATAGGGAAAAGTCTTGGTTACCGGCTTTGAGTCTTATGGAGATAATCAGACGAGACAAAGGACAAAGAAGAGTGCCCGGACCAATAGTAACTGTCAGCGCTACAAACAATTCCACAGGACAACAGCAAAAACCAGGCGGGGGAGCTTGGGCAACATTGAGTACGAATTACGGCACTTCGACTACTCTGGAACTATCTCGTTCATCGTCAACAGTGACAGCTTCTGAACCGAGCACCAGTCAAGATCCACCAAAACCTCGCATAGACTACTTCGATGCACCACCTGAAGACTAA
Protein Sequence: MGEWNYNQYPPGYTWTNSRENAAQQPEYYHQQQGNNVPQQYVGFQDFLSQYQQSNSYQTYSNNGYQNQQQFPQYPRNPVDVRHQQYQQQQNSETRPSKKHENSSTSASNSRVPFEPIPDQHHQGEIHVDNTTDQVASSSRHESHRPRRHVNHSETASGKNVASKSKLMATAVEFVPQGSRTDTKTFHNSKISIPNGSSESREPFNRKDDKFNSPSRTNNQPRPKNNPIASNDSNKNTNWRRRDNNEEPSHSNASTPVSEDHQFDGNYGGESNYAQNSSSSSSRYKKEAYQNSKPKYNNSESNITESNKNYNNGRAAKTYNLTGNQRQSAENGNGKYPQRKQQSYSSNETFRQKNNHRRNDQYVNKENFQESDDYGNGSSKHKNKAPASAKNMNRKDSEVTKDIDGASVSQRERLMEQLDKGVLECLVCCERIRQIDSVWSCGNCFHVLHLKCISKWARSSIAEGVWRCPACQNNNSIVPTDYKCFCGKQNNPDWKRGGDSAHTCGDICGRLPPSCLRHPCTLLCHAGPCPQCDAVVQKKCECGATSQSMRCSHNQPLLCETICKKTLNCQVHTCDDKCHAGSCQPCKVTIDQQCYCSKTEKRTLSCDADSVGVSNYSCCGVCDKKLTCGNHNCTSICHSGPCDECHLLPENIKKCPCGQTLLTSEQRRNSCLDPVPLCDKICSKVFNCGPLEDRHKCKSSCHHGNCPPCPDKTLVSCRCGHMNKNLKCVELENEKDNVKCGRKCSKKQSCGRHRCKTLCCIDTEHRCMLPCNRSLTCGLHRCEDTCHNGHCDPCWRTSFDELRCRCGEAVRYPPIPCGTRPPACTQPCPVSRPCSHPPLHVCHPAPTVCPPCTVLTTRYCHGRHKMRKTIPCHQEEFSCGLPCGKELYCSKHKCIEICHKGNCPTTCSQRCEVERPGCGHPCGGSCGHANPCPIVTPCRRPVRVTCSCGRRTTTKPCAEHMRDLQRLQANAGMLAGAMGKPIDIKELIAKGNTTTTLECDDECQIEERNRRLAIGLQIRNPDLSAKLTPRYSDFLKQFAVRDEGFSNKIHEKLSELVLLAQKSKQKTRSHSFQPMNHQKRQFVHEMCEHFGCDSVAYDTEPYRNIVATAYREKSWLPALSLMEIIRRDKGQRRVPGPIVTVSATNNSTGQQQKPGGGAWATLSTNYGTSTTLELSRSSSTVTASEPSTSQDPPKPRIDYFDAPPED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -