Basic Information

Insect: Arctopsyche grandis
Gene Symbol: RREB1
Assembly: GCA_029955255.1
Location: JARCGT010000065.1:5649590-5658957[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 9.1e-05 0.007 17.4 1.1 1 23 88 110 88 110 0.97

2 13 6.4e-06 0.00049 21.0 4.0 2 23 119 140 119 140 0.98

3 13 1.5 1.2e+02 4.1 0.1 2 23 213 236 212 236 0.86

4 13 9 6.9e+02 1.6 0.3 1 20 291 310 291 312 0.90

5 13 0.04 3.1 9.0 0.1 1 23 451 473 451 473 0.97

6 13 0.011 0.88 10.8 0.1 3 23 484 504 482 504 0.98

7 13 0.001 0.081 14.0 2.0 1 23 510 533 510 533 0.97

8 13 0.001 0.08 14.0 2.8 1 23 958 981 958 981 0.96

9 13 0.00035 0.027 15.5 1.3 2 23 1292 1313 1291 1313 0.97

10 13 0.024 1.9 9.7 5.1 1 23 1319 1342 1319 1342 0.97

11 13 0.63 49 5.3 0.3 1 19 1382 1401 1382 1403 0.92

12 13 0.017 1.4 10.2 0.4 2 23 1565 1586 1564 1586 0.94

13 13 0.019 1.5 10.0 5.9 1 23 1592 1614 1592 1614 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	9.1e-05	0.007	17.4	1.1	1	23	88	110	88	110	0.97
2	13	6.4e-06	0.00049	21.0	4.0	2	23	119	140	119	140	0.98
3	13	1.5	1.2e+02	4.1	0.1	2	23	213	236	212	236	0.86
4	13	9	6.9e+02	1.6	0.3	1	20	291	310	291	312	0.90
5	13	0.04	3.1	9.0	0.1	1	23	451	473	451	473	0.97
6	13	0.011	0.88	10.8	0.1	3	23	484	504	482	504	0.98
7	13	0.001	0.081	14.0	2.0	1	23	510	533	510	533	0.97
8	13	0.001	0.08	14.0	2.8	1	23	958	981	958	981	0.96
9	13	0.00035	0.027	15.5	1.3	2	23	1292	1313	1291	1313	0.97
10	13	0.024	1.9	9.7	5.1	1	23	1319	1342	1319	1342	0.97
11	13	0.63	49	5.3	0.3	1	19	1382	1401	1382	1403	0.92
12	13	0.017	1.4	10.2	0.4	2	23	1565	1586	1564	1586	0.94
13	13	0.019	1.5	10.0	5.9	1	23	1592	1614	1592	1614	0.98

Sequence Information

Coding Sequence: ATGCAGGATATGTCGTGTCTGATCAGCGAACCGGCCAACTCACCACCCAGAGTCTTACGATCAGATAGCGCATTGGAAAggatcacagaaaccaaagaatcgAGAATCAAAACTATGCCAAAGATTACCAGAAACAACCAAAAAGAAACTCAATTAGCCAGACGCCAAAACGCAACTGTTGTAGATAGCTCACATGTGAATTTAGACCCACCGCATGATAATATCTCGGTAGAAGGATTAGAAAACGGCCGCGAAGGAGTCTTCAAGTGTAAAGTTTGCGACAAGGAATACAACTCCAGTGCCAGCTTAGAGAAGCACTCGTCAAGTCACACCAACAACGAAAGGTCGTCTCCTCGTTGCAAAATGTGCGATATGACGTTCTCAACCAACAGTGGTCTCCACAGACACATGAGGAGTCACAAACAGACCAGCTCTCACGGCTCGGATACAGACTCCGACGCCTCATCTTCCGGCTCTCCGAAAGTCAATCATGACCTGCCTAGGGGTCCGCGCAAGAGGAGGGTCGAATACAACAACAATGGAAGCACCGATACCAGCATCGAAGAAGATCAAAGTCCAACGACTAGAAAGAGGTCCAAGACCATTAACAACAATTGCATCAACGATTTCAAACTCAGCTGTCCCGTTTGCGACAAGAAGGACTTTACCTCTCCCATCGTCTTCGAAATGCACATGGATGAAAAACATCCTAGTTATCAAAACGAAAGAAATCTGACCatttcaaaaaagaaaaattccgTAGCCGGTTTCGACGATTGCACTTTTACCGACTTTTCAAGTCGAAAGTTCCCTGAAATAGCCAAAGCAGTGTGCGAGCAGAACGTACACAAGTCCATCACCGAGCAAAAGTTCAGGTGCAAAGCCTGCTCCAGAGACTTTCCCTGTGAGAGTGCTCTCGAAATACACGAGAAAGGCTGCGATATGAACCACACAGAAGAAAGCACCTCGAAGTCCTGGCAAGAGCAATCTAGCAGCGCTTCCAATGAAGACGCTCGCAGAGACGACTTCTTCGCCAAGTTGGATCTTCAGAACAGCTCGCCGACCTCGTCCGAGCACAAACGGCCATCCATAGAGCATTCCAAACATAAAATGCAAACCTTTCATACCCAAAGATATAACCCCATTTCCAAAGATTTGCGGCGACACTTCGTCGACAGTTCCAAAGATCTTGCAGATATACAGTCGATACTTTCCGTAGCTGCTTCTGGAAGTCTGCTGGAGCAGTTGACGCAGACTAGCCGTGATCAACACGGTTCCAAAGAACACGATCAAGAGGAAGTTCAAGATGCTTTCGCCGCCGAGTTTCGCAAGATGAAACTTCGCGGGGAGTTCCCCTGCAGGTTGTGCACTGCAGTTTTCCCGAATTTGCGCGCTTTGAAGGGTCACAATCGAGTGCATCTGAGCGGTAACGGTTCTGGTCCTTATTGGTGCAATATGTGTCCTCAATCTTCATTGGATAAAGCTGCTTTGGTCCGCCACATGAGGACCCACAATGGTGATCGTCCTTACGAGTGTGCCGTATGCAATTATGCTTTTACCACTAAAGCCAATTGCGAAAGGCATTTGAGAAATCGACACTCTAAAATAACCAGAGAAGATGTTAAGCGCTCTATCATCTACCATCCGTCAGAAGATCCCAACAACGACGagataaatacaaaattgaacaTTTCTCGGGAAGAAATCAAAAGATCTCAAATGTTTAATAATAGCATGGAGGCTTCGGAACATATGGACGATGTTGATAGGATCAAGAGCGAAAGGACAACGCCAGTGTTGTATCCCAGAGATCTGCCAGCAACTCTGCAGGAACATGGTCTAAATATACCTATTCCAAGAGACTTATCTATTGTTATTCCTCAACCTCGTGATATAATACGTGCTCACTGTTCCACTGAAACTCCAATTACCACTACGTCTGACGAGAATCCAACGTCTAGAATTAAGGTTAAAGGCTTCGGACAGTTAACTCAAATACCCGAGTTTACACCTGAATCTGATCACGAAAGAGATAATTACAGCGAAGACGAGGCAGTTGAACCGGCTGAAGAACCATTCTGCGAAAAGAGTTCAAATTATACCAACGAAGCTCCGATGGATCTGAGCATAACAGATTGCCAAGAAAATGTTCTGGATCTGAGCAAGAAGAAGAGTGATAAAGCCGAAGAGAAACCGGTGTACGAACCCGATCAGGATGAATACAATTCAAAAACTTTGGAATTCAACAACAACCAAGGAATGAAAGCAGCATTGTATGAAAAACAAATGATGATTATCAGACAGCAGTTGTTGAAAAATGCAAGCTTAGATCCGGCTACGGGATTTTATCCAAATCCCCTGACTCAATTTTACGGAAGAACTGGTGCTCCTTTTGCTGGACTCGGACTTTCACCTGCGTTTCCACTGAATCCTTATTTTCTACAACACAATCCATTCTTGGCGCCTACTGTCAACCCAAATCTTGTCGACTTCAATGAACTGATGCAAAAAGAGATAATCAGAGGGCTACAACTCTCCGGCGGAGGGTTGGTCGGCATGgaacataataatattatggGAAGTATGGCACTCGCGAAAGAGCGTCTGCAAAGTATGCAACAACAAGCTATGAGCAATGACCTAAAAGTCCAGCCTGAAGATGAAATTAAACCACAACCTTTACACGTCAATACCGATACGCCGACGACGATTCCGTTCGCTCCGATGGTTTCTTCACCAGTTACTCCGTCACCAAAACTGCCTAAAAAAGAGACAATGCCCAATCAAAGCCCTAATTCTGTTAAAATGGTGATCAAAAACGGTGTACTTATGCCGAAGCAGAAGCAACGCAGATACAGAACCGAAAGGCCTTTCTCCTGCGAGCACTGCTCTGCTAGATTCACTTTGAGATCCAATATGGAGAGGCACatcaaacaacaacatcctCAATTCTGGTCCCAGCGTCAACGATCAGCCATAGGCAGTCTGCCCAGAAAGAGTCCCCTCTCACTGGTGCCTCAAAATATAACAGTTCCTTCTTTGGGGTTTGATAACAGATTGAATTACGTGAATAACGTACATAATGACCCACCCAGCATGCAAGATAACGACAAAGCGCAAATCCAAAACAACCAAACGGTTTCACCTGTGAGCAAAAACTACGCAATGATATCCGACCAGGTGAAGTTCGCAATTTTAGCTCAACAGCTCAAGTCACAAGTGTCCGCGCAGCAGAATGATGCCAAAAATAAGGATGCAGTGGTCAACGGCGATAACGAAGACGAGGACGAGGAAGATGCGTTGATAATAGACGAGGGAACAATGGATGACAAAAACCACAATTCTAAACAAGCAAAAATTGTTTCGGAATCGTTCGAGCCTGACCCAAATTTAGCGGCCAAAAAGGTCGCCTTGGAGATTTTGACCGACGCCTCGACCAAACAGGACTTTGATTGTAAAATTGCTGGAAATCTGATCAGCAAAAATCCTCAACATTTCGCGAGCACTACTGTGACTGATATCCCTACGTTTGTGTCCCAGATCGGACAATCGGAACAGATGAAAAACGCCATACCAAAAACTGAAGAAGGCGATCTTGTACCGGTCGCTCGGCTTTTAGATAATGCCGCATCTCAAATGCCATTCGGAAAGTATTTCAAGGGAGATTATTCTGGGAATTCAGAGAGCTCCAGAAAAGATCTGAACCAACAGTGCGAAGGATCTGAGGAGGATGAGGAAGGATTGGTCGCCTCGTCTGGATCAACAAGCGAAGGAAATAATTCAGGCAGCGATGAAAACAGATCTGATTCTGAGAAAGCTACTGCAGCTCCTCAAAAGAAAAAGTCGGCATACAGTCTGGCCCCTAATCGCGTTTCGTGCCCTTACTGCCACAGGAAGTTTCCATGGTCTTCTTCTCTCCGCAGACACGTCTTGACACACACTGGtcaaaagccttacaagtgccCTCACTGTCCCCTACTCTTTACAACGAAATCCAACTGCGATCGCCATCTCCTTCGCAAACACGGATCCAATTCTCAACAGACGCTCCAAGTCTCCTCCGGAGCCACCCCACCGGACGCTACCCCCATTCCGGAACTGAACAACCAAGGTTTCATGATGAGGAACGTGCCTGAGCGCCCATTCAAGTGCTCCATCTGCGCCAGCAGCACCTTCTCCACCCTCAACAACTTGAGAAAGCATGCGATATGCAAGCACGGCGACAACTCACTGCCTGATAGTCCCAAAAACGCTGACGAATCCCACTCCAGACGGGAGAGCTGCGACAACGATCACCAAATGTCGTCCGACGGTGAAAGGTCTCCTAAGCACGATGACGTAGACGGAGATAAGAACGATTGGGACAATCAAATTTCTACGACCAAGTCTAGTCCAGTACATGCGCAAGACATTCCTTCTAACATGCAAAACTCAGACTTGCCCTTCAAGTGTCACCTGTGTGAAGGATCTTACGCTGAAAGGCAAGTAGCTCTGGACCACATCAAAGAGTACCACGAATCCGAATATGAGCTTTTGGTAAGCAAGGGAGCTTTGGAGACCGGATTGACGTTTACTGAGGAACTTGGATCTTCAGCTTCCGGACATCGCAGCGAGGGAGGTGAAGATCAAGCCGGCGACGATAACATTGAACAAATGAGAGGCAAATTCCCCGATTATGCAAATAGAAAGGTGGTTTGCGCTTTTTGCATGCGTCGCTTTTGGTCTGCTGAAGATCTGCGCCGTCATATGAGAACCCACACTGGAGAGAGGCCTTTCTCTTGCGACGTCTGTCGCAGACGCTTCACCCTGAAACACTCCATGCTGCGTCATCGCAAGAAGCACTCCACATCAGACAACAGAAGCTGCGAGGATATGGTCAGCGGAGATGAAGACGCGCTGTCGCCTTCGACCTCCAACCACAACCACTCATCGACGATGAACTCCACAAACTCCAACAGGACCGTTTCGCCGATACCCAACAGTCACTTATCTCACGCCAACACGTCCACACCAATTTCTGGCGCACCTCGCTTCGCCCAGCTCAACGCTTACCAAATAGCAATCAACGCCAAAAATCTGACTTCCAGTCCTGAAATACCGAGCAACGTGAACAACAACAATTCGCCACCAGCTCAAACCTACGACGGCAAAGTCAAAGTGCACAACACTCGCAGGGAGCTCAATCCCAGAAACAGGTACTCCAGCGAGGAGACGGACGCGCACGAGAGCGAAGTCGAATCTGGAGATCTGATCGGCAACCTTTTGGGCATCAGCGACCGGGGCATGATCAACAAGCTGTTCTCGTGTCCCAACGAAGCTGCCAAACTCCTGGGAGTGAAAAAGTGA
Protein Sequence: MQDMSCLISEPANSPPRVLRSDSALERITETKESRIKTMPKITRNNQKETQLARRQNATVVDSSHVNLDPPHDNISVEGLENGREGVFKCKVCDKEYNSSASLEKHSSSHTNNERSSPRCKMCDMTFSTNSGLHRHMRSHKQTSSHGSDTDSDASSSGSPKVNHDLPRGPRKRRVEYNNNGSTDTSIEEDQSPTTRKRSKTINNNCINDFKLSCPVCDKKDFTSPIVFEMHMDEKHPSYQNERNLTISKKKNSVAGFDDCTFTDFSSRKFPEIAKAVCEQNVHKSITEQKFRCKACSRDFPCESALEIHEKGCDMNHTEESTSKSWQEQSSSASNEDARRDDFFAKLDLQNSSPTSSEHKRPSIEHSKHKMQTFHTQRYNPISKDLRRHFVDSSKDLADIQSILSVAASGSLLEQLTQTSRDQHGSKEHDQEEVQDAFAAEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRVHLSGNGSGPYWCNMCPQSSLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHSKITREDVKRSIIYHPSEDPNNDEINTKLNISREEIKRSQMFNNSMEASEHMDDVDRIKSERTTPVLYPRDLPATLQEHGLNIPIPRDLSIVIPQPRDIIRAHCSTETPITTTSDENPTSRIKVKGFGQLTQIPEFTPESDHERDNYSEDEAVEPAEEPFCEKSSNYTNEAPMDLSITDCQENVLDLSKKKSDKAEEKPVYEPDQDEYNSKTLEFNNNQGMKAALYEKQMMIIRQQLLKNASLDPATGFYPNPLTQFYGRTGAPFAGLGLSPAFPLNPYFLQHNPFLAPTVNPNLVDFNELMQKEIIRGLQLSGGGLVGMEHNNIMGSMALAKERLQSMQQQAMSNDLKVQPEDEIKPQPLHVNTDTPTTIPFAPMVSSPVTPSPKLPKKETMPNQSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQFWSQRQRSAIGSLPRKSPLSLVPQNITVPSLGFDNRLNYVNNVHNDPPSMQDNDKAQIQNNQTVSPVSKNYAMISDQVKFAILAQQLKSQVSAQQNDAKNKDAVVNGDNEDEDEEDALIIDEGTMDDKNHNSKQAKIVSESFEPDPNLAAKKVALEILTDASTKQDFDCKIAGNLISKNPQHFASTTVTDIPTFVSQIGQSEQMKNAIPKTEEGDLVPVARLLDNAASQMPFGKYFKGDYSGNSESSRKDLNQQCEGSEEDEEGLVASSGSTSEGNNSGSDENRSDSEKATAAPQKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPYKCPHCPLLFTTKSNCDRHLLRKHGSNSQQTLQVSSGATPPDATPIPELNNQGFMMRNVPERPFKCSICASSTFSTLNNLRKHAICKHGDNSLPDSPKNADESHSRRESCDNDHQMSSDGERSPKHDDVDGDKNDWDNQISTTKSSPVHAQDIPSNMQNSDLPFKCHLCEGSYAERQVALDHIKEYHESEYELLVSKGALETGLTFTEELGSSASGHRSEGGEDQAGDDNIEQMRGKFPDYANRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDVCRRRFTLKHSMLRHRKKHSTSDNRSCEDMVSGDEDALSPSTSNHNHSSTMNSTNSNRTVSPIPNSHLSHANTSTPISGAPRFAQLNAYQIAINAKNLTSSPEIPSNVNNNNSPPAQTYDGKVKVHNTRRELNPRNRYSSEETDAHESEVESGDLIGNLLGISDRGMINKLFSCPNEAAKLLGVKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -