Basic Information

Insect: Arctopsyche grandis
Gene Symbol: -
Assembly: GCA_029955255.1
Location: JARCGT010000008.1:18458043-18467961[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 9.4e-05 0.0073 17.3 2.0 1 23 161 183 161 183 0.97

2 26 0.14 11 7.3 0.6 1 20 222 241 222 243 0.93

3 26 0.037 2.9 9.1 0.3 2 20 262 280 261 282 0.94

4 26 0.0014 0.11 13.6 1.4 2 23 352 374 351 374 0.96

5 26 0.00034 0.026 15.6 2.0 2 23 405 426 404 426 0.94

6 26 0.013 1 10.6 6.8 1 23 439 462 439 462 0.98

7 26 3.8e-05 0.003 18.5 1.1 2 23 480 502 479 502 0.97

8 26 0.011 0.88 10.8 1.2 1 23 557 579 557 579 0.97

9 26 0.0033 0.25 12.5 1.4 2 23 636 657 635 657 0.97

10 26 0.00069 0.054 14.6 1.6 2 23 666 687 665 687 0.97

11 26 0.01 0.79 10.9 0.4 2 23 699 720 698 720 0.96

12 26 0.07 5.4 8.3 2.0 1 23 726 749 726 749 0.96

13 26 0.1 8 7.7 3.2 1 20 762 781 762 784 0.93

14 26 1.5 1.2e+02 4.1 3.6 1 23 795 817 795 818 0.93

15 26 0.0039 0.3 12.2 0.1 3 23 852 873 851 873 0.96

16 26 0.048 3.7 8.8 0.9 1 23 892 914 892 914 0.93

17 26 0.0021 0.16 13.1 1.1 2 23 954 976 953 976 0.94

18 26 0.00038 0.029 15.4 3.8 1 23 1000 1022 1000 1022 0.96

19 26 0.51 39 5.6 0.5 2 21 1026 1045 1026 1046 0.93

20 26 5.7 4.4e+02 2.3 0.3 3 23 1103 1123 1102 1123 0.96

21 26 0.0054 0.41 11.8 2.0 2 23 1130 1151 1129 1151 0.95

22 26 0.00074 0.057 14.5 1.7 2 23 1162 1184 1161 1184 0.96

23 26 0.33 25 6.2 5.4 2 23 1200 1218 1200 1218 0.95

24 26 0.41 32 5.9 3.8 1 23 1303 1325 1303 1325 0.91

25 26 0.00055 0.042 14.9 4.2 2 23 1336 1358 1335 1358 0.96

26 26 3.4 2.6e+02 3.0 3.7 3 23 1376 1393 1375 1393 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	9.4e-05	0.0073	17.3	2.0	1	23	161	183	161	183	0.97
2	26	0.14	11	7.3	0.6	1	20	222	241	222	243	0.93
3	26	0.037	2.9	9.1	0.3	2	20	262	280	261	282	0.94
4	26	0.0014	0.11	13.6	1.4	2	23	352	374	351	374	0.96
5	26	0.00034	0.026	15.6	2.0	2	23	405	426	404	426	0.94
6	26	0.013	1	10.6	6.8	1	23	439	462	439	462	0.98
7	26	3.8e-05	0.003	18.5	1.1	2	23	480	502	479	502	0.97
8	26	0.011	0.88	10.8	1.2	1	23	557	579	557	579	0.97
9	26	0.0033	0.25	12.5	1.4	2	23	636	657	635	657	0.97
10	26	0.00069	0.054	14.6	1.6	2	23	666	687	665	687	0.97
11	26	0.01	0.79	10.9	0.4	2	23	699	720	698	720	0.96
12	26	0.07	5.4	8.3	2.0	1	23	726	749	726	749	0.96
13	26	0.1	8	7.7	3.2	1	20	762	781	762	784	0.93
14	26	1.5	1.2e+02	4.1	3.6	1	23	795	817	795	818	0.93
15	26	0.0039	0.3	12.2	0.1	3	23	852	873	851	873	0.96
16	26	0.048	3.7	8.8	0.9	1	23	892	914	892	914	0.93
17	26	0.0021	0.16	13.1	1.1	2	23	954	976	953	976	0.94
18	26	0.00038	0.029	15.4	3.8	1	23	1000	1022	1000	1022	0.96
19	26	0.51	39	5.6	0.5	2	21	1026	1045	1026	1046	0.93
20	26	5.7	4.4e+02	2.3	0.3	3	23	1103	1123	1102	1123	0.96
21	26	0.0054	0.41	11.8	2.0	2	23	1130	1151	1129	1151	0.95
22	26	0.00074	0.057	14.5	1.7	2	23	1162	1184	1161	1184	0.96
23	26	0.33	25	6.2	5.4	2	23	1200	1218	1200	1218	0.95
24	26	0.41	32	5.9	3.8	1	23	1303	1325	1303	1325	0.91
25	26	0.00055	0.042	14.9	4.2	2	23	1336	1358	1335	1358	0.96
26	26	3.4	2.6e+02	3.0	3.7	3	23	1376	1393	1375	1393	0.91

Sequence Information

Coding Sequence: ATGGCGCTCCTGTCGCTCAGCAAGTGCCGGCTGTGTCTGAAACTCGGCGACTTCTACTCCATATTCGCCGAGGACAACACGGTGCAGCTGGCGCGCATGGCCATGGCCTGTTCGCAAATACAGATCGAAGAAGGCGACGGATTACCCAATAAAGTATGTGGAGAATGTGTCGAAAAACTAAGCGCAGCTTACATATTCAAACAACAATGCGAACGATCCGACGCCGAGCTTCGAAAATCTTTAAACAACACAGGATTGACCAACCAGAACGAGAAGACACCGCGACAACAGAGATCCGCCAAAAAGAAGCGAAAACACAACGAAATATCACAATTGGGCAACAGCAATCTACTAGAAGAGCGGTACAGCGTCAAAGTACCCAACACTCTATCTTTGGAAGGCACCCGTTCAAACACAGCTAAGAAGCGCCGTCTCTCCGAAACCTCCTATAGCTCAAACGTCTCTGCCCCGATGGACAAATTCGACTGCAAGATTTGCAAGAAGAAGTTCACCAAACTGCGTAGCCTCAACGGCCATTTGAGGATCCACAAAGGAGCCAACGGCGTGGAGAACGACTCGTCTTCGGTGACTCAGCCGTACGAGAACGAAAATTCGCAGATCGAAGACGCTGCAAGTAATTCGAACTTACGCGAAGGCGAGTTGTTCAATTGCGAAAAGTGCGGCGAGCAATATCACAACAAGGTTCTGTTCAACGAGCACGTCGATCAGTGCAAAGAAGAAGACTTCGACGAGAAGGCGGCCATGTACAACATGCTCAAACTAGTCTGTCCAGTCTGTAAGAATAAGTATAAGAAGAAGATATATCTCCGCAAGCATTTGGGCCGAAGCGCTTGCGGTTTCAAGTTACGGAGCGGCATCGAAGGCTCCGACATGCAATTCTTCAGCAAGGAAGACGTGGCGTTCCTGCCAAAGCATTCGAACCCTCGCAGTAAAAACGTGCAGTGTTCCAACTGTGACGGCATGTTCTGGTCGCACTCCATCATGCTGAGGCACTTCTTGAAGTGTCTGCGGGACAAAGGCGCCAATAAGATCCGGTGTATGACGTGCGGGGTGAACTTCACGAGTAAGAATTACTTTTACAGGCACATCAAGAAGATTCATCTGTTTTGCGACGTGTCCATTAAAAAGATTGTCAAGGTCGAGGCTCAGAACGGCCTCGCTCCAGAAGGTAAAGCTCATGTTAATTCTCTGCGGTGTCATAAATGTAATAAGTCGTTTGATACTCAGACGAAGCTTGTTATGCATTTGGCAGCTCACATGGCGAATATAGACGAGAACGTCAAACGGCAGCCGTTCAAGTGCAGTAAATGCAACAAGAAGTTCAGATATAGAGCAATACTGCGGAACCATCTGAAGAAGTGTCACAAAAATCTACCCTCCGACTTGTCCATATTAGACGTGCCATCGAAGGGCAACCAGTGCGACATGTGCGGCAAGTCTTTCAAGTACGCCAAGACCCTCGTGTGGCACAAAAACACCAAGCACCCTACAATTGACGATTCGCTCATAGCTTTGTACAAGCCGGGCATCGAGTACTCCAAATGCCCTGCCAAGTGTCTCCACTGCGACGTGGTGCTGGACAACGAGCACGAGACCAAAATGCACAACCGGATGCACATAGAGAACAACGTCAAGGTCAAGAACGAGTACACGTGCCCCAATTGCGATTTGAAATTCACCAACACGAAGATATTCCGGCTCCACATCAAAGAGCACAACGATAACAATgcagacgacgacgacgatggTATATTCGACGCGAGCATTTCCAACTATTGCGAAGTCACCAGTAACTTGAATAGGGATTCGGATACTGAGATTGATATCAAACCGTCGTTCGATACGCTGCAAGAGTATAAGCCGATCGTTGAAGATGACGGCGTGACGTGTTCCGTCTGCGGTAAGAAGCTGGAGTCTCTGAAGGGATACCACCTGCACATGAGGACGCACAAGTATAAGCCGACGTTCAACATGTCTTGCTTCATCTGCCATGGGCAATTCGCAAATAAGGAAGACTATCAGAAACACATGCGGATACACTACAACGATGACTCTCTGGATCCGGCCCTCCTCACATGCACTATTTGCAAGCGACCCTCGAAGAACTTGCGCTCGTACATCGCACACATGTCTTGGCATACGGTCAACGGCCGATTCAAATGTTACATATGCAGCGAGACGTTCCCCTACTTTAAACTGTATGGCAATCACATGACCTCGAAGCACCAGATAAAAATTACCGAATGCTCTGTGGCCACCTCTCACGAGTGTCAACAATGCGGCAAGTACTTTGAGAATGACGAATCGTTGCAGTATCACGTATTATGTCATCAACACGGAGAACCACCCAAGGATGAAAAGTACGAGTGTGTTCCGTGCAAAGAAAAGTTCTCCACAAGGTATCAGCACGTCGTTCATATGCAATCCCATCATCATTCGTATCCTGGTTGGGAAAATTTAGGCTTTTCTAAAGGGAAGCCTAAGTTTCCGTCTAAATTCAAAAAGAAGAATAAGAAAATGGCCAAAGTAGCCTGTCCTGTGTGTGATGTCGTCTTTATATCCCGCGTGCGGTTCAATAGGCATTTGAAAAATGCTCACCCCGTTaagaaaatggtcaaaaaggATGATCCCGATGGTGTGATTCCGTTGAAACACATATGCGTCATGTGCGGGAAAGAATTCTCATCGGAAGAACGTCTCCAGTTCCATCTGTCGATGCACAAACGTAAGCCTGAACTGTACAAATGCACCCTATGTTTCAAAAAGTCGTTCTCATTGAAGAATCACCTCTTCCATTTGAGGGGTCATCTTTTAAAACACCATAAAGATTCGCCGCTCGAATGCGACACTTGTCATAATACGTTCGTTCGGCGACAAGAGCTGCGCATTCATTTGCAGCAGGCGCATAATATCATCGAAAATTATGTTACGAAGGTGGATCGTAACGAGGATTGGAAGCCGGGCGAGCTGCAGGAGCATCAGTGTCACGTCTGCGGCAAAATCCTCCGCAATCAAAGCACATATAACAAACATATATTCTGGCACAATACGCGCCGTTGCAACTACTGCTTCACTTACTTCGACAAGAAGACATTCCTTTTAGCTCATGTTATGTATAACTGTGATAAGAAAAAGCTGGTCGGAAATTCCGACCAGTTCGATAAGAAGCTACGATGCCATATTTGCTATAAGCAATTCTCTATTGTTGTAAAGTTGCATTGTCATTTGAAGGTGCAGCATAATTTGGAACCGGTCGGCAAGGGAGCTGTTGTTAAGACGTCCGCTTGTGATTTTTGCTTCTCGGTGTTCCCGTCTGAGGAGCGGATGCTGTCACATCGAAAGGTTCACTTTTACTCTTCCTCGATGAAATGTAAGATCTGTTCTAAGCCGTTCCGTGTGATGTCGTATTTTAAAAACCACAAAGTGAGGCACTATCGGCAGTCCTATGCCAAAAAGCCTCTCAGTTGTGACCATTGCGACGAGCAGTTCACAACCATGTACACTTACGTTAAGCATTTGAGGGTTTCGCATAAACTTCCGATGGTTTGGCTGGTATCGGAAGCGATGCCGCTCGAAGAGTGTAACATTTGCCACAAAGAGTTCACACACTTGGAACGGCATATGATGTATCACGAAAAGTacaaatgtaaaaaatgtaatcaatTCTTCCTGTCTGAAGTCTTGTTCAACAATCACTTTTGCGAGGTCGACAGCGAAGACGAGACTAACGTAGAACGTAAGCAAGTTCCCGTTTTGACTAAAGCTGTGGAGCAGACGGTACCTGTTGAATCTCAATCGTATAGCGAGTGTGAGTATTGCTTTAAACCGATATCGACGTTTTATACCAAGACGAAGCATGACGCTAATCATAGCAAGGTCGTGTATTTTTGCTGCCGCCTCTGCGACAGACGCTTCTTCATGAAGTCGGCTTTCAATGTCCATAGTACAGCTCATCGCTTGCAGCACTTTAATAAGAACCCGCTGCGGTGTCGGCATTGTGGTGAATCTTTCAATAGATACCAACATTACACGGAGCATATACGGCAAGTTCACGATGATCCCGAGACGATGGAGTTCCACCTGAAGCCGAGTCAACCCCGCGACTGTCTCATCTGCAAGAAGACCTTCGTAAACCTGCATCGTCACTACAAATATCACCTGGCATTACGATGTAAGCACTGCTTGAAGTACGTACTGTCTGAAAAAATGTACAAGAGTCACAACTGCAGCGACGAGAGCGAAGATCAGAGCATGTTGGTGGAGTTCGACGGGGATATCTCGTCACTGATAGATCCGGACGTCAACGAGTGGGAGACGGAACGTATGATCGAAGCGATACCGAGGAATGAGGATTTCGCTCTGTCCGACGATGGGGATTTTAAAAGCAGTGCTCTTTTGGAGAGCGTTGAACATCTCAATAGTGAGAGTCGAAGTGGGTCTGCTTCCGTTTCTGAAGGCTACTTGACGAATATAAGTTCGTTTGGTCATTTGACTTTTGATAACTTCTCGCCGGTGATTTCTTCAACGGTGTCGTTGAGCTCGTCGGTAGTCGAGAAGGATAAGGAAGACGAGGTGGACATTGTTAATATACAGGTTAAAAGTGAGCCGATCGATCCGTACTATAGAGATTATGGGCAATTCGACTTTCAAAACTCTCTGATGGATATAGACAATCCGTCtggttga
Protein Sequence: MALLSLSKCRLCLKLGDFYSIFAEDNTVQLARMAMACSQIQIEEGDGLPNKVCGECVEKLSAAYIFKQQCERSDAELRKSLNNTGLTNQNEKTPRQQRSAKKKRKHNEISQLGNSNLLEERYSVKVPNTLSLEGTRSNTAKKRRLSETSYSSNVSAPMDKFDCKICKKKFTKLRSLNGHLRIHKGANGVENDSSSVTQPYENENSQIEDAASNSNLREGELFNCEKCGEQYHNKVLFNEHVDQCKEEDFDEKAAMYNMLKLVCPVCKNKYKKKIYLRKHLGRSACGFKLRSGIEGSDMQFFSKEDVAFLPKHSNPRSKNVQCSNCDGMFWSHSIMLRHFLKCLRDKGANKIRCMTCGVNFTSKNYFYRHIKKIHLFCDVSIKKIVKVEAQNGLAPEGKAHVNSLRCHKCNKSFDTQTKLVMHLAAHMANIDENVKRQPFKCSKCNKKFRYRAILRNHLKKCHKNLPSDLSILDVPSKGNQCDMCGKSFKYAKTLVWHKNTKHPTIDDSLIALYKPGIEYSKCPAKCLHCDVVLDNEHETKMHNRMHIENNVKVKNEYTCPNCDLKFTNTKIFRLHIKEHNDNNADDDDDGIFDASISNYCEVTSNLNRDSDTEIDIKPSFDTLQEYKPIVEDDGVTCSVCGKKLESLKGYHLHMRTHKYKPTFNMSCFICHGQFANKEDYQKHMRIHYNDDSLDPALLTCTICKRPSKNLRSYIAHMSWHTVNGRFKCYICSETFPYFKLYGNHMTSKHQIKITECSVATSHECQQCGKYFENDESLQYHVLCHQHGEPPKDEKYECVPCKEKFSTRYQHVVHMQSHHHSYPGWENLGFSKGKPKFPSKFKKKNKKMAKVACPVCDVVFISRVRFNRHLKNAHPVKKMVKKDDPDGVIPLKHICVMCGKEFSSEERLQFHLSMHKRKPELYKCTLCFKKSFSLKNHLFHLRGHLLKHHKDSPLECDTCHNTFVRRQELRIHLQQAHNIIENYVTKVDRNEDWKPGELQEHQCHVCGKILRNQSTYNKHIFWHNTRRCNYCFTYFDKKTFLLAHVMYNCDKKKLVGNSDQFDKKLRCHICYKQFSIVVKLHCHLKVQHNLEPVGKGAVVKTSACDFCFSVFPSEERMLSHRKVHFYSSSMKCKICSKPFRVMSYFKNHKVRHYRQSYAKKPLSCDHCDEQFTTMYTYVKHLRVSHKLPMVWLVSEAMPLEECNICHKEFTHLERHMMYHEKYKCKKCNQFFLSEVLFNNHFCEVDSEDETNVERKQVPVLTKAVEQTVPVESQSYSECEYCFKPISTFYTKTKHDANHSKVVYFCCRLCDRRFFMKSAFNVHSTAHRLQHFNKNPLRCRHCGESFNRYQHYTEHIRQVHDDPETMEFHLKPSQPRDCLICKKTFVNLHRHYKYHLALRCKHCLKYVLSEKMYKSHNCSDESEDQSMLVEFDGDISSLIDPDVNEWETERMIEAIPRNEDFALSDDGDFKSSALLESVEHLNSESRSGSASVSEGYLTNISSFGHLTFDNFSPVISSTVSLSSSVVEKDKEDEVDIVNIQVKSEPIDPYYRDYGQFDFQNSLMDIDNPSG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -