Basic Information

Insect: Arctopsyche grandis
Gene Symbol: -
Assembly: GCA_029955255.1
Location: JARCGT010000065.1:7574456-7578634[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0089 0.69 11.1 1.0 3 23 30 51 29 51 0.96

2 23 0.58 45 5.4 1.5 2 21 349 368 348 369 0.92

3 23 2.9 2.2e+02 3.2 0.6 1 21 377 397 377 398 0.95

4 23 8.4 6.5e+02 1.7 0.1 1 23 449 472 449 472 0.83

5 23 0.01 0.81 10.9 1.3 2 21 482 501 481 502 0.94

6 23 0.23 18 6.7 0.2 2 23 510 532 509 532 0.94

7 23 4.7e-05 0.0036 18.3 1.5 3 23 555 576 553 576 0.96

8 23 0.029 2.2 9.5 1.8 1 23 582 605 582 605 0.90

9 23 0.0065 0.5 11.5 0.1 1 23 627 650 627 651 0.96

10 23 0.002 0.16 13.1 0.5 1 23 655 677 655 677 0.98

11 23 0.22 17 6.7 3.7 1 23 683 706 683 706 0.94

12 23 5.3e-05 0.0041 18.1 2.7 1 23 719 741 719 741 0.98

13 23 0.0026 0.2 12.8 1.7 1 23 786 809 786 809 0.97

14 23 5.9e-05 0.0046 18.0 0.9 1 23 872 895 872 895 0.98

15 23 0.00099 0.077 14.1 0.7 2 23 929 951 928 951 0.96

16 23 0.0033 0.25 12.5 0.2 2 23 957 979 956 979 0.96

17 23 0.52 41 5.5 0.2 5 19 1030 1044 1026 1047 0.84

18 23 0.00016 0.013 16.6 0.3 1 23 1056 1078 1056 1078 0.94

19 23 0.0037 0.29 12.3 0.1 3 23 1178 1199 1177 1199 0.89

20 23 9.8e-08 7.6e-06 26.7 1.3 3 23 1206 1226 1205 1226 0.98

21 23 0.00028 0.022 15.8 3.2 1 23 1257 1279 1257 1280 0.96

22 23 1.6e-05 0.0013 19.7 0.6 1 23 1337 1359 1337 1359 0.98

23 23 0.00047 0.037 15.1 1.3 1 23 1368 1391 1368 1391 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0089	0.69	11.1	1.0	3	23	30	51	29	51	0.96
2	23	0.58	45	5.4	1.5	2	21	349	368	348	369	0.92
3	23	2.9	2.2e+02	3.2	0.6	1	21	377	397	377	398	0.95
4	23	8.4	6.5e+02	1.7	0.1	1	23	449	472	449	472	0.83
5	23	0.01	0.81	10.9	1.3	2	21	482	501	481	502	0.94
6	23	0.23	18	6.7	0.2	2	23	510	532	509	532	0.94
7	23	4.7e-05	0.0036	18.3	1.5	3	23	555	576	553	576	0.96
8	23	0.029	2.2	9.5	1.8	1	23	582	605	582	605	0.90
9	23	0.0065	0.5	11.5	0.1	1	23	627	650	627	651	0.96
10	23	0.002	0.16	13.1	0.5	1	23	655	677	655	677	0.98
11	23	0.22	17	6.7	3.7	1	23	683	706	683	706	0.94
12	23	5.3e-05	0.0041	18.1	2.7	1	23	719	741	719	741	0.98
13	23	0.0026	0.2	12.8	1.7	1	23	786	809	786	809	0.97
14	23	5.9e-05	0.0046	18.0	0.9	1	23	872	895	872	895	0.98
15	23	0.00099	0.077	14.1	0.7	2	23	929	951	928	951	0.96
16	23	0.0033	0.25	12.5	0.2	2	23	957	979	956	979	0.96
17	23	0.52	41	5.5	0.2	5	19	1030	1044	1026	1047	0.84
18	23	0.00016	0.013	16.6	0.3	1	23	1056	1078	1056	1078	0.94
19	23	0.0037	0.29	12.3	0.1	3	23	1178	1199	1177	1199	0.89
20	23	9.8e-08	7.6e-06	26.7	1.3	3	23	1206	1226	1205	1226	0.98
21	23	0.00028	0.022	15.8	3.2	1	23	1257	1279	1257	1280	0.96
22	23	1.6e-05	0.0013	19.7	0.6	1	23	1337	1359	1337	1359	0.98
23	23	0.00047	0.037	15.1	1.3	1	23	1368	1391	1368	1391	0.97

Sequence Information

Coding Sequence: ATGTCAAATGGATTGGTCGGTGCTGGTCATTTGTCAACCGAGATGGAGCATCGTCCTGTACCTGTCGAGCATTTAGCGTCTAAAGACTGTTTGGTGTGCGGTCGTGCTTATCGCTATTCTCACAATGCTCGCCGCCACGAACTCACATCTCACGGATACGACCGCTACACCAACAAGATTGAACCAAACCTTCCCATTTCGAACATGAGATCAAATTCTCACAATCCCAAATCGAGGTTTGTGCAACATACCATGGGAAATAGAATGGAAATGTTACAGACACAATCCTCGCTGGATGGTCAACCTGAAATACTGAAATCTTTACTGACAGCAAGATCGGACGGTGCAATTTCAGAGTCTGAACATGTTCGATCGCGCTCTGAAACCCCAGAATCGATGGCTTCCGATGCTGAATTGCAGCCGTACCAAGTTGAAACGATAATATCCGAACCTGATACGTATATGCACAACTCTGACATGTctgatgatgaaaataatatgcAAATTGAACATTCTCCGAGGTCAAACGCTGAAGATATTGATTACGACATTGATTTGGATTTGAGTTCGCagttagatataaataaaattattggcgTAGATGGTGACGGTTATGGTGATGATTACGATGACGGTGAAAACGATGAAGGTGAAAACGATGAAGGTGAAAACGATGATGGTGAAAACGATGaagatgtgaatgatgaatacGACGATGAAGGTCAAAACGTGTCTGATATTGTGGAGAGTGAAGTTGTATGCTCGGTTGATGCAGAATTACATAATATTCACCCTGACGAAAATGATGTCAAAGAAGAGCAAGACGATGACGTTCCCGAGTCTTTAGTACCTATTGTTGAATTAAACGAAACTGCCGATGGTACAAATATGGAGAGCGATGACAGTGAGTCAGATGATGAGTCCCCCGAATCCAACCAATCGGCTATTTTGGAAAGCGTTTGTGATAACAATTTAACGATAACGTCCGGTCAAAAGAATTTCATCTTGAATTACCgagacgtcatcgaacaaatcaaCACGATGAAATGTAAGTGTTGCGATAAAGATTTTCCTAGAAGAAAGGCAGTCATTCAACATTTGCAAAAGAATGGATCTAAGATACCGAAACACACGTGCTACAGTTGTGTCTTGCAATTCAACAATATCGGTGCATTCTTGAGTCACATGCGCTATAATTGCTGCAACGACACTTGGAGATTGATATATAGAGAAGGCGATATTCCGGATAGCATGGTTGTCGACGACATGTCTCTGATGGATTCCCAAGATAGTTCTGAAGGGCTTTTCAAGTCGCAGTACAAAGAGATTTTGAATTTCCGATCGTACGCTTGTAAATTATGTCCAGCTAAATACCAATTGAAACAATTAATCATCAAACACGTGTTAGACGTTCACGAGAGCATAACAAAAGTGCCGTCTCTCACGTGTTTCAATTGCAGATATAAGTTCTCAGACAGTCGTCTTTGGAAGAAACATATTCGAAACGGCGAATGCACTGTAAACGTATCGTGTGACCTTTGTTCAGAAAGGTTCCAATCGACGCAGGATTTCAACGAACACGTCCTGATAGTGCACATGGAGGCATTCGTAAACCAATCCGTCGATAATAATTTACATTCgaccaatggaagatctaccaTTTGCCCCCTGTGTAAAAATAGCTTCTCGAACTATCACAATCTTATCAAACATTTGAGAATGGTGCACAATGAAGACAAACCCCATATCTGTCAGCATTGTAATACTAAATTCAGCGAGGTCGGCGAATTGAACCAACATGTCTATTTGGAACATTCGGAACAATTCATGAATGGACACGAAGAAGATTCTGATGTGAAGGAGGAAATTGCTTATAATTACTCGTGTACTGAGTGCGATGCTGTTTTTGAGACCGTCGATGGATGGACTGAACATCAGATTAGTGTGCATCATCACGTCGCTTTCGAGTGCGatcaatgtaataaaaagttttgGGAAGAAAGTGAACTAGAAGAGCACAGAAATACCCATATGAGAGCGCAGATTTACAAATGCACCATGTGCTCGAATTCTTATGCTACTACACAAAAACTCACAGAGCATATATTTCAATGTCATCAAGAGGCTCACCAGGAAAAACATTTTGAGACCCAGTTTTATTGCGAAATATGTAAGCGATTCTTCAAAAGTAGACAGGCTTTCTCTAACCATATGCGTATTCATGCTAAAGTTCCAACGACCAATCGTCGTGCCGGTGAGGTAAAACGTGTCGATACTCAATTCAAGGGGCACCAGACACAACCTCCAAGCACTCAATCATCTTCAAAGCCGTTGAAAATCGTCAGTCCCGCACCTTACTCTTGCGATATTTGCGGAAAAGGCTTTTTgcataagaaaaatatatggaaGCATAAGAAAATCTTGCATTCTAATATTGTTAACAAGCCGAAGGAAACTTCTGAAACTAGTAGTAATCAAATAAGGGGCGTCTCGACCGAGGAAGATGAATATACAAACGATGGTCATTCACACCTTGCGACGCCTCAATTTGATAGTTTTGTATCTACCATGTATGATCAGCCGGATAATAGTGGCTCCGAAGGAAATTTAATGTATCAATGCGATCTCTGTGATAAAAGATTCGCTGTTAAAAGTAGTATTTGGAAGCACAAACGAGTTAAACACGGTGTGATAAATCCATCTACACCCGAAACTACCAGGATGGATTGTTTGAAACCCGATAGCGGCCAAACAGACATGATTAAATCTGAAACTGCTATCATAagttgtacaatatgtaaaataaacttCACCGATAAGAAAGCTTACTATCGGCATAGAAAAATTGCGCACAAAGTCAGCTTGCAAATGTGTAAACTCTGCGGCATGACTTTGAACACGTCCATGGAATTGTTCGAACACTTGCGAGTTGCGCACGAAAAGGAATTGTTGGGTTATAATGCTAGTCAAGTAAAGCCTCAAAAGAAAGGTCTAATATCTAGAACAAATATTTCCAGTGACGAAGATGAAGGCAGTCAGTCGTTAAGTCATTCCAACAATCGCAAAGGCTCTAAATACGTTTGCATAGCTTGTAGTAAAACTTTCCCCGACGTGTCATTGTTACAGAATCACAACTGTATTCCGCAAGCGTCTATGTCGGAGACTTACGATTGCGAAATTTGCAATAAGAGTTACACATCGATTTCAGCGCTCAAAAGCCACCGGGGCTGGCATTTGCGTTCTCCGGACGGCAGAGCTGCTTTCAGCAACTCGGGCCTTTGGATGCCCCAGAATAAAGTTACCAGTAAAGTAAGCAAGCACGAAGTACTAGAACCTCCTCGCCCAAAGAATCAGGTCATCCAGAAAGAAATATCACCTCTACAAATCAAACGAAAATTGCCACCCGATGTGCAGGTTACTTTGCTGAAGAAAAAGAAATTCTCCGAGAGCTCTATGGAGGCTCTGCCCATGACACCTACCATCCCGCAGAATCCCGTCACCCAACAGCTAGCAGTCAACGAAGACCGCTATTGTGAACCCTGCGGGAAGGTATTCACCAAAAAAGCAGCCTATCAGCGTCACGTCGAGGAAGTCCACAAACTCAATGCCGTATTTTGCCCCGTGTGTAACAAGAGTTTCTCGAGAAAGTCCACGCTATGGGTGCATATGCGGAAGCACGATCCCGACGATGTCTCCGAACCGGCCGAAGCCGAAGACAGCGACGACGAGCAGGAAAGCAGCTTCCAAGTCATCAGACCCCCGCCGGTGTACAGGTGCGAAGTTTGCAACCTGCAGTACAGTTCTTCGAAAGCGCTGCGACGGCACAGGCTGAAGCACCATCGAGACGTCAACGAGGTGGGCAATCACGTCAACGACCGAATAGCGCCGAGATTGTCCGAGGCCGTCGAGGAGAACCGCTTCATCGAGGAGGGTGTCGAAAAAGAGTACAAATGTGGTGTGTGTGAGGACGAGTGGGACACCGAGGAGGGGGTGTGGCACCACGAACATTTCCGATGTTCGTTATGTGGAATGAATTTTTCACAGAATCAGTACCTGGTAGAGCACATGCGAGCGCACAATCCTGGGAAAGAGCAGATGTACTTTCCGTGCGGTCAGTGTGAGCGATTCTACATGAATAAAAAGAGTCTTCAACGGCATATTGAAACTTTTCATCAATAG
Protein Sequence: MSNGLVGAGHLSTEMEHRPVPVEHLASKDCLVCGRAYRYSHNARRHELTSHGYDRYTNKIEPNLPISNMRSNSHNPKSRFVQHTMGNRMEMLQTQSSLDGQPEILKSLLTARSDGAISESEHVRSRSETPESMASDAELQPYQVETIISEPDTYMHNSDMSDDENNMQIEHSPRSNAEDIDYDIDLDLSSQLDINKIIGVDGDGYGDDYDDGENDEGENDEGENDDGENDEDVNDEYDDEGQNVSDIVESEVVCSVDAELHNIHPDENDVKEEQDDDVPESLVPIVELNETADGTNMESDDSESDDESPESNQSAILESVCDNNLTITSGQKNFILNYRDVIEQINTMKCKCCDKDFPRRKAVIQHLQKNGSKIPKHTCYSCVLQFNNIGAFLSHMRYNCCNDTWRLIYREGDIPDSMVVDDMSLMDSQDSSEGLFKSQYKEILNFRSYACKLCPAKYQLKQLIIKHVLDVHESITKVPSLTCFNCRYKFSDSRLWKKHIRNGECTVNVSCDLCSERFQSTQDFNEHVLIVHMEAFVNQSVDNNLHSTNGRSTICPLCKNSFSNYHNLIKHLRMVHNEDKPHICQHCNTKFSEVGELNQHVYLEHSEQFMNGHEEDSDVKEEIAYNYSCTECDAVFETVDGWTEHQISVHHHVAFECDQCNKKFWEESELEEHRNTHMRAQIYKCTMCSNSYATTQKLTEHIFQCHQEAHQEKHFETQFYCEICKRFFKSRQAFSNHMRIHAKVPTTNRRAGEVKRVDTQFKGHQTQPPSTQSSSKPLKIVSPAPYSCDICGKGFLHKKNIWKHKKILHSNIVNKPKETSETSSNQIRGVSTEEDEYTNDGHSHLATPQFDSFVSTMYDQPDNSGSEGNLMYQCDLCDKRFAVKSSIWKHKRVKHGVINPSTPETTRMDCLKPDSGQTDMIKSETAIISCTICKINFTDKKAYYRHRKIAHKVSLQMCKLCGMTLNTSMELFEHLRVAHEKELLGYNASQVKPQKKGLISRTNISSDEDEGSQSLSHSNNRKGSKYVCIACSKTFPDVSLLQNHNCIPQASMSETYDCEICNKSYTSISALKSHRGWHLRSPDGRAAFSNSGLWMPQNKVTSKVSKHEVLEPPRPKNQVIQKEISPLQIKRKLPPDVQVTLLKKKKFSESSMEALPMTPTIPQNPVTQQLAVNEDRYCEPCGKVFTKKAAYQRHVEEVHKLNAVFCPVCNKSFSRKSTLWVHMRKHDPDDVSEPAEAEDSDDEQESSFQVIRPPPVYRCEVCNLQYSSSKALRRHRLKHHRDVNEVGNHVNDRIAPRLSEAVEENRFIEEGVEKEYKCGVCEDEWDTEEGVWHHEHFRCSLCGMNFSQNQYLVEHMRAHNPGKEQMYFPCGQCERFYMNKKSLQRHIETFHQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -