Basic Information

Insect: Arctopsyche grandis
Gene Symbol: -
Assembly: GCA_029955255.1
Location: JARCGT010000010.1:21080405-21085012[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2.9e-06 0.00023 22.1 0.7 2 23 139 160 138 160 0.97

2 16 4.4e-06 0.00034 21.5 1.8 1 23 166 188 166 188 0.98

3 16 4.5e-07 3.5e-05 24.6 0.3 1 23 194 216 194 216 0.98

4 16 4.6e-06 0.00036 21.4 3.1 1 23 222 244 222 244 0.98

5 16 5e-07 3.9e-05 24.5 1.3 1 23 250 272 250 272 0.98

6 16 2.7e-06 0.00021 22.2 0.9 1 23 278 300 278 300 0.98

7 16 0.00024 0.018 16.0 3.0 1 23 306 328 306 328 0.98

8 16 5.6e-05 0.0044 18.0 0.5 1 23 334 356 334 356 0.97

9 16 8.2e-07 6.3e-05 23.8 0.4 1 23 362 384 362 384 0.97

10 16 5.8e-06 0.00045 21.1 0.5 1 23 390 412 390 412 0.95

11 16 4.8e-05 0.0037 18.2 0.5 1 23 604 626 604 626 0.98

12 16 0.00079 0.061 14.4 0.3 3 23 634 654 633 654 0.98

13 16 5.4e-05 0.0042 18.1 5.1 1 23 660 682 660 682 0.96

14 16 2.1e-05 0.0016 19.4 2.4 1 23 688 710 688 710 0.98

15 16 1.3e-06 0.0001 23.2 2.5 1 23 716 738 716 738 0.99

16 16 3.3e-06 0.00025 21.9 1.7 1 23 744 766 744 766 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2.9e-06	0.00023	22.1	0.7	2	23	139	160	138	160	0.97
2	16	4.4e-06	0.00034	21.5	1.8	1	23	166	188	166	188	0.98
3	16	4.5e-07	3.5e-05	24.6	0.3	1	23	194	216	194	216	0.98
4	16	4.6e-06	0.00036	21.4	3.1	1	23	222	244	222	244	0.98
5	16	5e-07	3.9e-05	24.5	1.3	1	23	250	272	250	272	0.98
6	16	2.7e-06	0.00021	22.2	0.9	1	23	278	300	278	300	0.98
7	16	0.00024	0.018	16.0	3.0	1	23	306	328	306	328	0.98
8	16	5.6e-05	0.0044	18.0	0.5	1	23	334	356	334	356	0.97
9	16	8.2e-07	6.3e-05	23.8	0.4	1	23	362	384	362	384	0.97
10	16	5.8e-06	0.00045	21.1	0.5	1	23	390	412	390	412	0.95
11	16	4.8e-05	0.0037	18.2	0.5	1	23	604	626	604	626	0.98
12	16	0.00079	0.061	14.4	0.3	3	23	634	654	633	654	0.98
13	16	5.4e-05	0.0042	18.1	5.1	1	23	660	682	660	682	0.96
14	16	2.1e-05	0.0016	19.4	2.4	1	23	688	710	688	710	0.98
15	16	1.3e-06	0.0001	23.2	2.5	1	23	716	738	716	738	0.99
16	16	3.3e-06	0.00025	21.9	1.7	1	23	744	766	744	766	0.95

Sequence Information

Coding Sequence: ATGACTTCTGTCGATAGCGAAGACAGGATGGACGTCAAAGATTTGCTAAGAGACTTCATAGTAAAGGAGGAATTGTCTTCGGAAGACGAAACTTTAAGCATTGCAGCTTTGAAACGGAACAAATTGAACGCCTCGTCGACAAAAGATCCACACAATGAAGTTAAATCAAATCGAAAAGTTAAGAAGTGCGCAAAGAAGAGGGGTCGGCCTAAAAAGGTCCCCGAAGAAGAAGTCAAAAGCGACAGCGAACGACCAAATATGGAGCTGAACTTCGAAATGGTCAAAACTGAGGACGTACTCGAAGCAACACCCGACAGAGATAATCTAACCAAAAAAGAGAAGAAGTCCAAGAAGCAAAAGCGACGGAAAAAGTACGACTTGGATCCTCAGCATTGTACGGAGTCGAACGTGTGGTCATGCAACGTCTGTGATAAGAAGTATACCCAAAAGAATGCTCTAAAGCTGCACATCCGAATGCACACCGGTGAGGACCTCTTCTCGTGCGAGTACTGCGAAAAAAAATTCTCCGTCCAGAGCAAGCTGACCTCTCATCTGAAGATCCACACGGGCGAGAGACCATACCCTTGCGAGTACTGCGAGAAACGATTCGCCGATCGGAGCACCCTGATCAAACACGTGAGAATCCACACGGGCGAGTATTTGTACTGCTGTCAGTACTGCGGCAAGAAGTTCATCCAGAAGTCGGGCTATCAGGCACATTTGAAGATCCACACGGGTGTGGATTTGTTCCCGTGCGAATTCTGCGGCAAAAAGTTCAATAGGAAGTCGACTCTGGTGTCGCACATAAAAATGCACACTGGCGATAAGCTGTTCAACTGCACGATGTGCGATAAAGTCTTCGCCGTTCAGAGTAAGCTGATGTCGCATCTGAAGACGCACACCGGAGAGAAACCTTTCCAGTGCGATATCTGTGATAGAAAGTATACTGAGAAGCATACGTTAGCTAGTCATTATAAATTACACTTAGAAGGTAAGTCGTTCGCGTGTAAAATTTGCGCAAAGAAATTCAGTAAGAAAGTGTCGCTGGATCGTCACATTCTGATCCACAGCGGGGAGAAGCCTTTCGCTTGCGATGTGTGCGGCAAGAAGTTCACGCAGAAGAGTCAGATGCAGGCGCACGGTAGAATCCACACCGGAGAGAAGCCGTTCCTGTGCGACTTTTGCGGCAAAGCCTTCCAGAGGAAGGACGCTCTCATAGCCCATAGGAAGACTCACACGCTCAGCGGACTGCTCAACGCCGGAGACGAGGAGTTGGAGAAGTGCGAAATCAAACCGCTCATTTGCGGACTCGACGGTCGGCCGATTTATTCCGACGTAAAAAATGCAAAAGACGGTCACGTCGACGAGGCTCAAAAGAAATTTTCTATCAAGTCGGCTATGATACCGACGTCGGACGcagaaaaaaaagtattcaacTCTATAGAAAAATCTTCGTATAGCATAGAAATAGATTTTGACGCTCAAGACTGTGAAGATTACGTACCTGAAGATGATGCTAGATCTCATTCTGTCTCGTCAAACTCTTCTAGTTCTtcctcgtcgtcgtcgtcgtcctcGTCTTCGTCCTCGTCCTCGAGTGACGATGaggatgatgatgacgataacGGCGATGCCAACAATGATTACACGTCCGACTTCGCCGAAGACGATGCCAAGAAGTGTGGCAACGGTATAGAAGCAACTGATAAGTTCGATAGTCAGAATGATTCCATTAGAATGGAGGATTTCAAATACGAGGCTTCTGATGAGAAAAGTTCTAAGAAAAAGGCAGTGGCTAAGAGCGATAGATTTCCTTGTTTCGTCTGTGGCAAGAAGTATGCGAAGAAGAGCGGTTTGTCGATGCACCTGCGACTGCACACCGGCGAGAAGTTGGTGGCCTGCGGTCACTGTCCGAAAGTGTTTGCCGCACCGAGCAAATATTTATCACACGTGAAGACGCACACCGGCGAGAGGCCGCATGCCTGCAACATCTGCGACAAACGTTTCACGGAGAAGCACTCCCTCTTCACCCACTACAGAATACACGTCGGCTACAAGCCCTACGAGTGTCCGACGTGCCACAAAAAATTCACCAAGAAGATTTCGTTGGATCGGCACTTGCTCATACACACCGGGGAGAAGCCGTTCCAGTGCGATCTCTGCGAGAAGCGATTCACGCAGAAGAGTCAGATGGTCACGCACCAGAGGACGCATACGGGCGAACGTCCCTTCCTATGCAACTATTGCGGGAAAAAATTCAACAGGAAGGACGCCCTGCAAACGCATAGCAAAATACATACGATGAAACACCTGCTCGCCGATGAGGGTTTCAAGATTGGCGGTGGAGCAACGGTGCGCGATAGACCTTTGCTGATGCCGCAGACCAACGGCGCCGAGAATGAAGAAGACGAGTAG
Protein Sequence: MTSVDSEDRMDVKDLLRDFIVKEELSSEDETLSIAALKRNKLNASSTKDPHNEVKSNRKVKKCAKKRGRPKKVPEEEVKSDSERPNMELNFEMVKTEDVLEATPDRDNLTKKEKKSKKQKRRKKYDLDPQHCTESNVWSCNVCDKKYTQKNALKLHIRMHTGEDLFSCEYCEKKFSVQSKLTSHLKIHTGERPYPCEYCEKRFADRSTLIKHVRIHTGEYLYCCQYCGKKFIQKSGYQAHLKIHTGVDLFPCEFCGKKFNRKSTLVSHIKMHTGDKLFNCTMCDKVFAVQSKLMSHLKTHTGEKPFQCDICDRKYTEKHTLASHYKLHLEGKSFACKICAKKFSKKVSLDRHILIHSGEKPFACDVCGKKFTQKSQMQAHGRIHTGEKPFLCDFCGKAFQRKDALIAHRKTHTLSGLLNAGDEELEKCEIKPLICGLDGRPIYSDVKNAKDGHVDEAQKKFSIKSAMIPTSDAEKKVFNSIEKSSYSIEIDFDAQDCEDYVPEDDARSHSVSSNSSSSSSSSSSSSSSSSSSSDDEDDDDDNGDANNDYTSDFAEDDAKKCGNGIEATDKFDSQNDSIRMEDFKYEASDEKSSKKKAVAKSDRFPCFVCGKKYAKKSGLSMHLRLHTGEKLVACGHCPKVFAAPSKYLSHVKTHTGERPHACNICDKRFTEKHSLFTHYRIHVGYKPYECPTCHKKFTKKISLDRHLLIHTGEKPFQCDLCEKRFTQKSQMVTHQRTHTGERPFLCNYCGKKFNRKDALQTHSKIHTMKHLLADEGFKIGGGATVRDRPLLMPQTNGAENEEDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00158426;
90% Identity: iTF_00158426;
80% Identity: iTF_00158426;