Agra005547.1
Basic Information
- Insect
- Arctopsyche grandis
- Gene Symbol
- CSRNP3
- Assembly
- GCA_029955255.1
- Location
- JARCGT010000014.1:5409508-5412054[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.5e-103 6.9e-99 330.8 10.3 1 218 279 488 279 488 0.94 2 3 0.29 8.2e+03 -2.9 0.6 84 103 600 619 560 642 0.46 3 3 0.28 7.8e+03 -2.9 0.4 34 82 687 738 669 760 0.54
Sequence Information
- Coding Sequence
- ATGAGCGAGAGTCAGCCGTTGAAGGATCAAATGAATCCGTCACCTTCCGTGTCTGCACCGGAGTCGAGTGTCGAGGAGTCTACAATTTGCAATCCACCTTCGCCAGTTCTACCGATAGCACCGCCGAGTGACAGTGCAGTTAAATCAGACACATGTGACGATTCCAACTTTCGCGAAACGTCTGAGGAGATAGACGAGAATACCAGCAATGTGGACACCGTTACAAAGTCCAGTGACATTAAATTGTACTCTTCGTTCAAAATAAACTCTGAAGTGAGTGATGTCGTTAATAAGGAGAGTGAGTTCAATTCGAATTTTAAATCTGATATAGATGTGAAGTTTCGCATGACGGACGCTTTAGCGGACAGTGCGTCTGTTGACGATGGTAAAATTGAACAAGATGTGGTGTGCGATTTCGAAGATAACAAAACCGACGTGGCATCTGCTGACAGTGAAGATTCTGCGTTGGGAAGTCTGCCGTGCGAATCAGTCGCCATACCGGAAACTGAAGATGAACCTCAAGATAGATCTGACGGCAGCGATTCCGGTCTAGGATCTGAGATAACCGAAGAGCAAACCGTACAACAACCTTTTACCGAATTGACTTCGCCTGAGGTTGAAAGCAGAGTGGTGTCCCTAACAACGGACAGtgccaattttaatataactaATGATAATTTAGAATgtaaaaatcttgtaaataaCACCGATGAAGCTTTAAATACATTACAATTCAAGAATGAATCGAAGTTAAACGAACTCAAGAGTGCGTTATCAGTACGAAGTAACTTAAAAAGGAAATTATCGGTGGATATCGATACTGAACCAGCACCTAAAAAGAAAAGAAGTATTACATTTGACGATGTTACAGTGTTTTATTTCCCTCGAGCTCAAGGGTTTACGTGTATACCGTCTCAAGGAGGATCAACCCTTGGGATGGCTAAGCGTCATACGCACGTACAAAAGTTCACTCTCGCCGAGCACACGTCAGAACAACgtcggttgcaccgacaaatcCTTCAACAGTTGAGGTGCGAACGTCATTCATTGCAAGGCTCATCGGTGTCGTCGAGTGATTATAGCGATTCCGAAGATGAACCGAGTGAAATGTCGGAATCGGAACTCGATTTGGATAGCTACTACTTTTTACAACCTGTGCCGACTCGGCAGAGAAGAGCACTCTTGCGAGCAGCCGGCGTTCGAAAAATCGAAGCCTTCGAGAAGGACGAGTGTCGGGACATACGCACTTCTAGAGAATTTTGCGGCTGCAGTTGCAAAGGATACTGTGACCCTGAAACCTGTTCTTGCAGTCAAGGTGGAATCAAATGCCAGGTAGACCGATTGAACTTCCCATGTGGTTGTACGAGAGACGGTTGCGGTAACACCACCGGTAGAATAGAGTTTAATCCGGTGAGGGTGCGAACTCACTTCATACACACACTAATGAGATTAGGCTTAGAGAAGAAGTCGGaagaaaacatatccaagataGACACTGTTGACCAGAGTCACTGGTCCGATCCGAGCAGTAGATTGTCAATGCCGAACAGTTCGTACAACCAAAGTGAATCATTAACATGTGGCAACTCGtctaataacaataaatataatggaaATTTGCTAAGAGATGTTAATTTATCAACCCATCTCGAAGTCGAATCGTGCGTCAACACGGGAACGTTCAATAACATGCATTACGAAAATGCCAACACTTCCAAATCGGGTCCAAATTTACAGTGTCGAGAAGATTCTTTGGATCTGTACGCATTCCGAGAAGAAAATTACAATGAGGAAAACGGTAACGACACTTCTAGATTACCGACCAACAGTAATAATACTCAAAACCAACAAATCGACAACAACTACGCAACAAACAATGCAAAAAGTAAATCAACACCACATTATACAGACTCCAACCATCCGAACTTCTCAGCGAACCCTTCCACTCTTTCGAGGTTTTCATGCGATATCAACTTTTCATACCCTCAACATCATGACTCTAATCATTATCCGAATCAACAATTTTCCGCAACCAACTTCGAAGACTTCTCCCAGTCGTCGATGACGAATGTTTTCAATCATTACAACCCAATGTACATGAACGATTATAGTGCAAAAGCTAGCGCACAAGAGAATGAAGAGAATCCGGCGAACAATCCAGAATATCATTCGGCACAGATGAACAACTACGGTGTGTACAGAACTTCAGATAATACATGTTACACGCACACGAGCGATGCAAAAGAAGCCAACCAATACACCAATTTGAATTCGGCCGCATACCCTCTCAGTAATAAATTGGAATCTTTCTCCGAGTTGATCCAAGGTCGATACACGTACAATACATACGAAAACGGAGAGAATATGCAACCAGTAGCGCCGGCAGCCGAACAAGTGGATTCTGCTGAAACCAATTCGAATCCCGTTACAGTTTCGAATACCGAAACGACCAGCGCCGATTGTCCGCAACAAAGTAGTCCTAGTGACGGTGATGAAAATTTtggtgaaattattaaaaaaactatgGTAGAAACAGTTTCAGCTTAA
- Protein Sequence
- MSESQPLKDQMNPSPSVSAPESSVEESTICNPPSPVLPIAPPSDSAVKSDTCDDSNFRETSEEIDENTSNVDTVTKSSDIKLYSSFKINSEVSDVVNKESEFNSNFKSDIDVKFRMTDALADSASVDDGKIEQDVVCDFEDNKTDVASADSEDSALGSLPCESVAIPETEDEPQDRSDGSDSGLGSEITEEQTVQQPFTELTSPEVESRVVSLTTDSANFNITNDNLECKNLVNNTDEALNTLQFKNESKLNELKSALSVRSNLKRKLSVDIDTEPAPKKKRSITFDDVTVFYFPRAQGFTCIPSQGGSTLGMAKRHTHVQKFTLAEHTSEQRRLHRQILQQLRCERHSLQGSSVSSSDYSDSEDEPSEMSESELDLDSYYFLQPVPTRQRRALLRAAGVRKIEAFEKDECRDIRTSREFCGCSCKGYCDPETCSCSQGGIKCQVDRLNFPCGCTRDGCGNTTGRIEFNPVRVRTHFIHTLMRLGLEKKSEENISKIDTVDQSHWSDPSSRLSMPNSSYNQSESLTCGNSSNNNKYNGNLLRDVNLSTHLEVESCVNTGTFNNMHYENANTSKSGPNLQCREDSLDLYAFREENYNEENGNDTSRLPTNSNNTQNQQIDNNYATNNAKSKSTPHYTDSNHPNFSANPSTLSRFSCDINFSYPQHHDSNHYPNQQFSATNFEDFSQSSMTNVFNHYNPMYMNDYSAKASAQENEENPANNPEYHSAQMNNYGVYRTSDNTCYTHTSDAKEANQYTNLNSAAYPLSNKLESFSELIQGRYTYNTYENGENMQPVAPAAEQVDSAETNSNPVTVSNTETTSADCPQQSSPSDGDENFGEIIKKTMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00815099;
- 90% Identity
- -
- 80% Identity
- -