Agra005876.1
Basic Information
- Insect
- Arctopsyche grandis
- Gene Symbol
- SMARCC2
- Assembly
- GCA_029955255.1
- Location
- JARCGT010000014.1:10786385-10791336[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4 3.1e+03 -1.0 0.0 33 44 121 132 118 134 0.82 2 2 1.5e-14 1.9e-11 44.5 0.1 3 44 534 575 532 577 0.95
Sequence Information
- Coding Sequence
- ATGAAATGCTTCCTGGACCTGAAGCCGGGTGGTTCGCTATGCCAGATATTCGCCACCATGTTCCGCTACAAGGCGGAGCAACGGTGGCGCAAGTTCGATTTCCAGGTTGGTAAGAATCCGTCTCGGAAAGACTTAAATATTCAACTAATGATGGAAATTGAAACTGGTCTGTTGGAATCTGAGTGTATGCGACTTCCAAACGTTTTCATTCGGCCGGATGTAGATAGAACTACGGCAGCTCGGATCAGGGAAATCATTGTATCTCATCAAGGAGACATATGCGATGAAGAGGAAGAAGCCACTCATATAATATATCCACCTGCTGATCCACTCGAAGAGGAATTTGCAAGACCTGTAATGCGACGTAGCCGGCAAGTCATGTTGCATTGGTATTATTTACCAGACAGTCACGATTCTTGGGTTACTATGGATTTGCCGGTTGACGCTCCTGAAAGTCCTTCATTCGACTTGCAACTTCAGAGGACTGAACCATGGCGTGTTTCTTCTACATGGGCGTTAGACGTTCATCAATACAATGAGTGGATGAATGAAGAGGATTATGAAGTCGATAtgaatggaaaaaagaaaGTTCACAAGTTACGTTTGTCTGTGGAAGATATGATGCAGAGCGGCAGTAGCAATACTGAGTCAAATGCTAAAACTAAGAAGCCCAAACGGAAACGATCACCATCACCACCACCAGTTAAAAGCAAACGAAAGAGTAGAGGTGGTCGTGCAAGTAAGGTTGATGGTGGCGGAGCTGAAAGTGAAGATACAGCGTCTAGAGAAGGCGCTGAAGAGACTGCGCCAGAACCGACACCACCTTCACCAGCTGCTCCACCACCGGCTCCCACTCCTGCGTCTCCAGCtccaccacctccaccaccacctGCCACTACGTCACCCCCACCCCAACCGGACGCTCACGGAGATGATTCACAAGGAAAAGCCAGCGATACAAACACTCAAGACTTTATATCAAAAGATGATATGGAAGATAATGTAACGGAACAAACACATCATATCATTGTTCCATCTTATGCAGCTTGGTTCGATTACAATTCTATACATACAATTGAAAAACGAGCTTTGCCTGAATTCTTCAACggcaaaaataaatcaaagacGCCTGAAATTTATCTTGcttatagaaatttCATGATTGACACGTATAGATTAAATCCGAATGAATACTTAACCAGTACTGCATGTCGACGTAATTTAGCTGGAGACGTTTGCGCTATTATGCGTGTGCATGCATTCTTGGAACAATGGGGCTTGTTGAACTATCAGATCGATGCTGAGATGCGTCCAACAGCAATGGGTCCACCTCCGACATCTCACTTCCACGTCTTGTCTGACACTCCGTCAGGTTTGCAACCTCTCAACCCGCTCAAGAACACTCAACCTTCACCGGCCAAACCGATTTTGCTCGACAAAGTTCAAGCTATGGATAGTCCGCAAGCTCGAATCGACGCTGAGTTGCAAGGTATTAAACAAGAGCCCGGTGTCGATATCAATGGACAGTTTGGTTTGAAATTAGATCAGTACGGACGCAGCGGTGGTCGAGGCGTGATCGGAGCTCGTAGTGGTGCTCGCGCTTGGACCGAACAAGAAACCCTTCTTCTTCTCGAGGCTTTAGAATTGTATAGGGATGATTGGAATCGAGTATGTCAACATGTCGGTTCGCGTACTCAGGATGAATGCATTTTGCATTTCCTTCGACTACCTATCGAAGATCCTTATTTGGATTGTGATGCAGCAGgtggTGTATTAGGACCGTTAGCGTATCAGCCGATAGCGTTCAGTAAAGGTGGAAATCCTGTTATGAGTGCGGTTGCATTTTTGGCGTCAGTTGTTGATCCTCGAGTTGCAGCTACTGCAGCTCAAGCTGCAATGGATGAATTTGCTAATATAAAGGATGAAGTCCCAGCTGCTATGCTCGATATGCATTTACGTTCTGCAGTACAAACAAGTCCTGCTGCAGCTCTTGCTAGCAGTGGTATTGCTGGTACGGATCCTGGTGAAACAGGTGTTGAGAAAAAGGAGAATGCCGAAGGAACACCTAAAACTGGAGAACCTATGGAAGTCGAGGGTGCGACTCCGGCAGCTGAAACACCTAAACCTGCAGAAGAAACAACGCCCGCACCTGAAAACGAAGAACCTAAGACTGAACCTACACCTGTTGAcgAAGGTAAAATACAAGCGGCAGCTGCTGCTGCCCTCGCTGCTGCAGCCGTCAAAGCCAAGCATTTAGCTGCGGTTGAAGAAAGAAAGATTAAATCTTTGGTTGCGTTACTTGTAGAGACgcaaatgaaaaaattggaaataaaattGAGACACTTTGAAGAGTTAGAAACGACGATGGAGCGTGAAAGAGAAgGTTTAGAATATCAACGGCAACAATTAATCACCGAACGACAGCAATTCCATCTAGAACAATTGAAAGCTGCCGAGTTCCGGGCGCGTCATCATGCTCAGCAGAGACTCGCTGATCCGACTGTCGCCAGTGCAGGACCTCCTACAGGCCCCCCGCCACCTGAGCCTCAACCAGCAGCATGA
- Protein Sequence
- MKCFLDLKPGGSLCQIFATMFRYKAEQRWRKFDFQVGKNPSRKDLNIQLMMEIETGLLESECMRLPNVFIRPDVDRTTAARIREIIVSHQGDICDEEEEATHIIYPPADPLEEEFARPVMRRSRQVMLHWYYLPDSHDSWVTMDLPVDAPESPSFDLQLQRTEPWRVSSTWALDVHQYNEWMNEEDYEVDMNGKKKVHKLRLSVEDMMQSGSSNTESNAKTKKPKRKRSPSPPPVKSKRKSRGGRASKVDGGGAESEDTASREGAEETAPEPTPPSPAAPPPAPTPASPAPPPPPPPATTSPPPQPDAHGDDSQGKASDTNTQDFISKDDMEDNVTEQTHHIIVPSYAAWFDYNSIHTIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPNEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLLNYQIDAEMRPTAMGPPPTSHFHVLSDTPSGLQPLNPLKNTQPSPAKPILLDKVQAMDSPQARIDAELQGIKQEPGVDINGQFGLKLDQYGRSGGRGVIGARSGARAWTEQETLLLLEALELYRDDWNRVCQHVGSRTQDECILHFLRLPIEDPYLDCDAAGGVLGPLAYQPIAFSKGGNPVMSAVAFLASVVDPRVAATAAQAAMDEFANIKDEVPAAMLDMHLRSAVQTSPAAALASSGIAGTDPGETGVEKKENAEGTPKTGEPMEVEGATPAAETPKPAEETTPAPENEEPKTEPTPVDEGKIQAAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARHHAQQRLADPTVASAGPPTGPPPPEPQPAA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00815748; iTF_00815041; iTF_00023697;
- 90% Identity
- iTF_00815041; iTF_00815748;
- 80% Identity
- -