Agra005254.2
Basic Information
- Insect
- Arctopsyche grandis
- Gene Symbol
- RCOR3
- Assembly
- GCA_029955255.1
- Location
- JARCGT010000013.1:10917266-10925802[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-08 1.5e-05 25.6 0.0 3 46 155 198 153 198 0.97 2 2 2e-12 2.5e-09 37.7 0.0 3 44 404 445 402 447 0.95
Sequence Information
- Coding Sequence
- ATGGTGCTGGCGGAGAGGGGTGCGGGCGCGGGGGCGGGTGCGGGTAGCGGGGGTGGGGGCGGAGGCGCAGGCGGGGGCGCGGGTGGGGCGGAGGCGGTGCGCAACGGCCGGCGCTCGCGAGGGCCGAGCCCCAACGGACACGCCTCGCCCGACTCCAGCTCGGACGACGACAATGTAGTACGATTTCCAGCCGAGAAGATACGAGTAGGCCGAGATTTTCAAGCAGTTTGTCCCGAATTAGAACCTCCAGAGGAACGGAAACCGGATCTCATCGCCGATAGAGCATTGCTCGTATGGTCGCCCACTTTGGACATAGCCGATAATAAATTGGATGAATATATTACCGTAGCCAAAGAGAAGTATGGTTACAATGGAGAGCAAGCCCTCGGTATGTTATTTTGGCATAAGCATGATTTGGATCGAGCTATTCTTGACTTAGCAAATTTTACACCTTTTCCTGACGAGTGGACAGTCGAAGATAAAGTGCTATTTGACCAAGCTTTTCAATTTCACGGAAAGTGTTTTCACCGCATTAGGCAAATGTTGCCCGATAAATCTATCGCTTCTcttgttaaatattattattcatggAAAAAGACTAGAGCCCGCAGTTCTGCAATGGACCGATCGGCCAACACTGTCAAGCGTGAAGGCTCACCAGATCGAAATTCTGATCGTGCATCGGACGATCGTGACTCTGATGTCGATGAAAAGGTCGGTGAAGGCAACGGAGAGGGGTGGTGTACCGCATGTGGTATCCTTTGCAACAAAATGATGCCCCACAATGCACATAAACTTTGCAATGCCTGCCACGCACACGCCAGGCGTACTGGCAGTTTGCGTCCAGTGTGCGGACCTGTATCGAGACGCGGAGGTCCAAAGCAAGCACGTTTTAAGCACAAGTTGCCGCGTGGTATTTATATCAACCATGACGATCTAATAGCAATGGCTAATGGATCTCAAACGGCAGCACAGTTGCATCTCCCGCCTGGCGATGGAAGTAATGTCAACAACAACGGTGCTATGCTAGGGTATCATCCAACATCGCTAAATCAAGGGGACTTTATGCTCAAGGCGATGGATAGAGAAATTTGTTCGATTAAAAGACAAGTTCAGAGCAATAAACAACAAATTAGTTCGCTCAAAAGAAAAAATTCCGAAGGAGTGGAAGACTTACGGCCTGGTGAAATATCTtcgaaaattaattcaaaatggaCCCCCGAGGAATTATTGCTGGCCGTTCAGGGTGTACGTAAATATGGTAAAGATTTTCAAGCCATAGCAGAAACAATTGGCACCAAGACTGAAACACATTTGAGGACATTTTGGGCTAGTAATAGACGACGATTTAATTTAGACTCTGTACTAAAAGAATGGGAAGCAGAAAAAGGAGGAGGAGGAAGCGGTGCTTCTTCGTCCGCTGCGATCGCCACATCTCCCAATCATGGTGCAACGACTAACGGTGAAGATTCTAGTGAAGTTGGTGGTAGTAGTTCTAATACTGGAGTGGCAAGTGGTGCTATTGTTAGAAGTAACTCTCCAATTGTTATTAAAGATGACAAGATGGAAGTTGATAGTGAGGGCTGTGCTCTCGGGTCAATAGCAGAGCAAGGTGGAGCACCCACCACGCCGTCCAAACCTAAATCTGCAAAATGA
- Protein Sequence
- MVLAERGAGAGAGAGSGGGGGGAGGGAGGAEAVRNGRRSRGPSPNGHASPDSSSDDDNVVRFPAEKIRVGRDFQAVCPELEPPEERKPDLIADRALLVWSPTLDIADNKLDEYITVAKEKYGYNGEQALGMLFWHKHDLDRAILDLANFTPFPDEWTVEDKVLFDQAFQFHGKCFHRIRQMLPDKSIASLVKYYYSWKKTRARSSAMDRSANTVKREGSPDRNSDRASDDRDSDVDEKVGEGNGEGWCTACGILCNKMMPHNAHKLCNACHAHARRTGSLRPVCGPVSRRGGPKQARFKHKLPRGIYINHDDLIAMANGSQTAAQLHLPPGDGSNVNNNGAMLGYHPTSLNQGDFMLKAMDREICSIKRQVQSNKQQISSLKRKNSEGVEDLRPGEISSKINSKWTPEELLLAVQGVRKYGKDFQAIAETIGTKTETHLRTFWASNRRRFNLDSVLKEWEAEKGGGGSGASSSAAIATSPNHGATTNGEDSSEVGGSSSNTGVASGAIVRSNSPIVIKDDKMEVDSEGCALGSIAEQGGAPTTPSKPKSAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00815033; iTF_00815744;
- 90% Identity
- -
- 80% Identity
- -