Agra012280.1
Basic Information
- Insect
- Arctopsyche grandis
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_029955255.1
- Location
- JARCGT010000029.1:24245919-24257492[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.1e-15 5.4e-12 45.8 0.2 2 45 404 448 403 448 0.95 2 3 9.8e-19 2.5e-15 56.5 0.0 1 43 838 881 838 883 0.95 3 3 1.8 4.7e+03 -2.0 0.1 3 13 1088 1098 1087 1105 0.83
Sequence Information
- Coding Sequence
- ATGGGTCGCAGGAAATGGAAACTCTACCAGGACGTGCTACTAGCCAGAAATCTACCTTTGCCGCAGCCGTCGGACGAGTCGGACGCCCTGTCGGACAGTGTGAGTGTGAGTCAAAGCCAGAGCCAACAGGCCGACGACGAGGACGCACACATGATAGCGACCACGGAGGCCATCCAGCGGCATTCCGGCGCTGCCGAGCTGGCGCCAGCCGACCACCAACACCCCGACCACCATCATCCCCATCATCCCCATCCCCAACACCCGACCCCGTCGCCGATCGCGCTCGACGAAGACTCCAACACCAAGCACGACTCGGACCCGGACCCCGACACGGACCCCGCCGAGTCGGCCGACGCGACCGCCCCCGCGCCCGCGCCCTCCTCCACCCCGCCCGCCGGACTCAAGATCAAGACCATCGAGCAGATCAACACCGTGGGTGTTGATGGCCCCGCCAACTGCAAGGACGGCGAGACGATCCTCGAGAGTCTGATCAAGAGGTCCAGCTCGGGCCCGCCGTCGCGCAGGCCGCTTCCGATCGACTGGACGCCGCAGGACAAGTGCCACTTCTGCGAGGACGGAGAGCTGGTCAGGCCTGCTGCGCCCGCGGAACAACCCCCCGCCGCGGAACAACCCCCTAGTCCAGCCGAATCAGAATCAGAGTCCAGTTCGAGCAGATCGGGAACTAGTCCACCAAGAAGTCAATTCCTCTTAACGCAACAAGCCCAAGCTCTAGCCCACTTTTTACAGCTCCAGCAACAGGCTGGAGCACCGCAAACGATGAATCAGGTGGAGTCCATGGCAGCATCGTTGGCTGCGGTGGCAGCCTTAGGTGGGGGCCCAGCCCTGCCTCCGGGCTTAGGGCTCTGCCCCCCTGCTGCCTTTTTATCCCCTTGGTATCTCAATGCCAATCAAAGGCCATCCATAACACCCGAAAGGGTGAATGCGGATGTTGAGAAGCCAACGGTAGGCTCGAGCCTGTCTTCGCCTTTGCAGACGGAGCAGCCCTTGGACTTGAGCTCCAAAAGCGCAGGTCCCAACTCTCAGGACTCTTCGGAGGCGAAACCCCTGAGTTCGACGTCCCTAGAAGCCAAAATACTGAGCATGGCACCTTCAGCCCTGGCGAACCTCAGAGCGCCACCCATGGACCCGAAGCAAATATTCAAGTCCAAACCCAGACTTGCGGCCCCCGGGGGTAGGAGGGCTTACTCCGAAGCCGAATTGCAGGCCGCACTCAGGGATATTCAATCTGGAAGACTGGGAACGAGGAGGGCCGCCGTGCTCTACAACATACCCCGCTCGACACTTCGCAACAAAGTCTACAAACTGGCTGTGGAGAGACAGCGAGAGTCCACACTACCTGGAACCCTCGCTTCGGCCATGGACAGAGACGATTCGAACGACATGGGAGACGACATCGATGATGACAAGGACTCCATCATGGACGAGGAGAAGGACGAAGAGAGAGAGACCCGACCATTGCTGTCTATGGAAGACATATTGAGATTTTCCCAAATGGACAGCGCGTCCGAGAACTTGAAAACCCTCTTGCAAAAGGGCGGTCAAAAGTTCTTTGACCTGGAAAGTCCCAAACGGGAAGCAGCGACATCGgatttgtggcctacgatcgaTCCGAGTGCGATGGCACCTTATATCCAATCGCTCCTGATGGCTGGCGGATTGGCAGGATCTTTGCCGAAACCCGACGACGCAACAGCACCCATGATGCCAGAAATAGTCAGACTGCTAGCAGAGGAGAGACAGAACATATTGAAAGAACACCTGATGAAACAGGATCACCTCCACAACGGCAAACAGACGGAGCAATCCAACGAGGACCTGTCCAAGAGATCGTATTCCAGACAGAGCTCGTCGACTAACTCCGTCATCATCAAAAACGAGAGATCGTCACCCGGTCGAAAGACAGACTCCCCGGAGGTGCAGATGGACACGTCAGAGCAAAATGCCGGCACCGAATCCAGAGATTCTCCTTCGAACGTCATATTAAGAATTCCGTCCTTCAAACCATTAGCAAACACGCCCAACTCAAACAAAAACGGCGGAGAAGCGTTTCAGGGTCCGGCGACTCCTCCACTTCCGTTCTTCGCGCGCAGTCCACATCCGGATCAAGCCATCAACGTCACACCCAGAACGACCGATCACATGTCTCCACCTTTAGTACATTCCAAGAATATGTTTTCACTGAGGGACGTCATCGCCAAGAGCATAAGCCAAAAGTTTCAACAGCAGGTTCCGTTGACGGGCAACCACAACGACTTATCCCAGATAAAGATGGAATCTCAGAACTTGGACGGCATGGCAGCCCTCAATTCTTTCAAACGAGGAGGATTCACACCGCCCGTTGGAGGACAGGGGATTTCGGTCATCAAGAATCTAACGAATCACGACATGTCTAGAAATTTTTCGAATAACAACGCCGGCAACCAATCGCAACAGAACAACGCCACTGGCGGAAAAGGCACACGACCCAAACGAGGGAAGTATAGAAACTACGATAGGGACAGTTTGGTCGAGGCAGTCAAAGCAGTACAAAGAGGGGAAATGTCCGTGCATCGCGCCGGCAGTTATTACGGCGTACCACATTCCACTTTAGAATATAAAGTCAAAGAGAGGCATTTGATGAGACCGCGGAAACGCGAGCCAAAAAATCCGAATCCAGAAGAGAAAACGGGAATACTCAGCGCGAGCAAACCCAACGACATTCCAGGCAGTGGCACTCTGAGGATAGACGTAAAGCCGAAAGTCGCACAGAAACCACCTTCAAAACCAACATTCCCGGCCAACTCGCCCAACGGTATGAAAATGCCTTCAATGTTTGATCCAGCCATGGCTTTGGGCTACAACCCAGCGCCGTTCCCGTTCTGGACCCACCCACCACCCTTTCACGGCATACCTGTAGAGTACTCTCCGCGAAATCCTGGAGCGTCTGGTAGCTTTCCACCCAACGCCGAATCGTTCTTCGCCTCTCAGATGATGCAGAGGCTCCAGGAGGAGTCGGCGAGGCATCCGGGCTTGTCTTCGAGCGCGCAGAAGGCCAACGTCTCCAACTCTCTGCTGAAATCGGCCAGAGACATAGCGGAGTTCTACGAAGGATCGGCCGGCACGAACGGCTCGTTTCTGGAAGGCATCATCAGATCCAGCTTGGAGCAGAATCCCCAAAGAGCACGACCCAGTGGAGTGGAAGACGGCGGTGGATTGGATAGCAGCGGTCGCCGACATCGACCTGACAACCTCCTCATAGCCGAAGAGATGAGGGAGGCTGTCAGAAAAGTGAGAGCCAGGGAAGCCGGAGGGGCTCCTTCGACTCCTACGGCTACTCCAACTCCTAAAACGGAACCTGCGTCGAGTCCCCCACCGCAAACATCCTAG
- Protein Sequence
- MGRRKWKLYQDVLLARNLPLPQPSDESDALSDSVSVSQSQSQQADDEDAHMIATTEAIQRHSGAAELAPADHQHPDHHHPHHPHPQHPTPSPIALDEDSNTKHDSDPDPDTDPAESADATAPAPAPSSTPPAGLKIKTIEQINTVGVDGPANCKDGETILESLIKRSSSGPPSRRPLPIDWTPQDKCHFCEDGELVRPAAPAEQPPAAEQPPSPAESESESSSSRSGTSPPRSQFLLTQQAQALAHFLQLQQQAGAPQTMNQVESMAASLAAVAALGGGPALPPGLGLCPPAAFLSPWYLNANQRPSITPERVNADVEKPTVGSSLSSPLQTEQPLDLSSKSAGPNSQDSSEAKPLSSTSLEAKILSMAPSALANLRAPPMDPKQIFKSKPRLAAPGGRRAYSEAELQAALRDIQSGRLGTRRAAVLYNIPRSTLRNKVYKLAVERQRESTLPGTLASAMDRDDSNDMGDDIDDDKDSIMDEEKDEERETRPLLSMEDILRFSQMDSASENLKTLLQKGGQKFFDLESPKREAATSDLWPTIDPSAMAPYIQSLLMAGGLAGSLPKPDDATAPMMPEIVRLLAEERQNILKEHLMKQDHLHNGKQTEQSNEDLSKRSYSRQSSSTNSVIIKNERSSPGRKTDSPEVQMDTSEQNAGTESRDSPSNVILRIPSFKPLANTPNSNKNGGEAFQGPATPPLPFFARSPHPDQAINVTPRTTDHMSPPLVHSKNMFSLRDVIAKSISQKFQQQVPLTGNHNDLSQIKMESQNLDGMAALNSFKRGGFTPPVGGQGISVIKNLTNHDMSRNFSNNNAGNQSQQNNATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKNPNPEEKTGILSASKPNDIPGSGTLRIDVKPKVAQKPPSKPTFPANSPNGMKMPSMFDPAMALGYNPAPFPFWTHPPPFHGIPVEYSPRNPGASGSFPPNAESFFASQMMQRLQEESARHPGLSSSAQKANVSNSLLKSARDIAEFYEGSAGTNGSFLEGIIRSSLEQNPQRARPSGVEDGGGLDSSGRRHRPDNLLIAEEMREAVRKVRAREAGGAPSTPTATPTPKTEPASSPPPQTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -