Agra004284.1
Basic Information
- Insect
- Arctopsyche grandis
- Gene Symbol
- kn
- Assembly
- GCA_029955255.1
- Location
- JARCGT010000012.1:4536509-4550543[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-123 2.4e-119 399.9 0.0 205 387 1 192 1 196 0.99 2 2 5.8e-06 0.041 12.8 8.4 425 504 209 296 193 326 0.71
Sequence Information
- Coding Sequence
- ATGAGAAGGTTCCAAGTGGTGATATCGACGCAGGTCGGCGTCGACGGACCACTCTTGGCCATCTCTGACAACATGTTCGTCCACAACAATTCGAAGCATGGTCGAAGGGCGAAGCGGTTAGACCCCACCGAAGCGGGTCTATACCCACCCCTGCCAGTGGCCACCCCCTGTATCAAAGCCATATCACCTAGCGAAGGTTGGACATCGGGAGGATCGACGGTAATCATAGTCGGAGATAACTTTTTCGACGGATTGCAAGTAGTATTCGGTACTATGCTCGTGTGGAGTGAGCTGATAACGTCTCACGCGATAAGAGTGCAGACACCACCCAGACATATTCCTGGAGTAGTCGAGGTGACGCTCTCCTACAAGAGCAAACAGTTTTGCAAAGGAGCACCGGGAAGATTCGTCTACGTTTCAGCTCTCAACGAACCCACTATTGACTATGGCTTCCAAAGATTACAAAAATTGATACCAAGACATCCAGGAGATCCGGAGAAGTTACCAAaggaaataatattgaaaagagCTGCAGATTTAGCGGAAGCTTTATATTCAATGCCTCGAAATAACCAACTGGGATTAGGGGCGCCAAGATCACCCCCAGGAGGAGGAATGCCAGGGGGTTTCAACTCGTACGCCGGACAATTAGCAGTGAGCGTCCAAGACACGGCCGCCGCTCAATGGACGGACGAGGAGTACGGCCGCGGGCAGAGCGGGAGTGCGTCGCCCCGgtcggggggcgcagccccgggtactgctgggggcgccgggggctACTGCTCCACCACTTCAACCCCCCATCCACCCCTCAACGGATATGCGCCTCCAGGACAGCTTTGCCAAGTGTCTTCAGCTCCACCCATCTTCAATTCCTCATCCAttTCGTATGGTGAGTCTTATTACAACCCGAGCTCTGTCGAAGTCTCAAATGGACACCATAAAGGCTTCAAGGACCGAAGTGCTTTTCTGCCGGTGCGCCACGGCTCTCCACCATACAGAGCTTTGGCTAACTGTCAACATTTAGCCGTACAATGTTAG
- Protein Sequence
- MRRFQVVISTQVGVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEAGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPGGGMPGGFNSYAGQLAVSVQDTAAAQWTDEEYGRGQSGSASPRSGGAAPGTAGGAGGYCSTTSTPHPPLNGYAPPGQLCQVSSAPPIFNSSSISYGESYYNPSSVEVSNGHHKGFKDRSAFLPVRHGSPPYRALANCQHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00751013; iTF_00178952; iTF_01024640; iTF_00815603;
- 90% Identity
- iTF_01012014;
- 80% Identity
- -