Basic Information

Gene Symbol
Arid4b
Assembly
GCA_029955255.1
Location
JARCGT010000003.1:5264123-5278109[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.6e-28 1.4e-24 86.9 0.1 1 89 416 502 416 502 0.95

Sequence Information

Coding Sequence
ATGGCAACCCCGCAGTGTCGCTTTCTCGCGGGCGGCGCGAGCGGCTGCGGCCGTCGCCTCCCGCACTCTAGCGCTCTCGCTTTCGTTCTCGTTCTCGCTCTCGCTCTCGCTCTCACTCTCACTCTTCGGCCCTCCGCCCCCGAGCCGCGGCCCCCCCCCGGCCCCCTGCCCCTCGGCCCCTCCGTTGACACGCGTCGTCGTGCCATTGCGCCATTTCACCGTTCATCGTTCGTCGTTCGTCGTTCACCGTTCACCGTTCACCGTCTCGCTGTCCTACATTGCATTGCATTGCGTCGAGTTGCCTCGGCTGGGTGGGAAACGCCCCTCGGACAAGCTGATGATCCACCGTTTTTGCCTGTCGGTACTGACGTCAGCGCAAAATACAAAGGAGCATTTTGCGAAGCTAAAATCAAGAAAGTAGTCAAGAATATTAAATGCAAGgtTTCATTTAAAGGTGTAGGTACTGGTTCTGTAACCGTTTTAGACGATGCAGTAAAAGGCACACTACGTGTAGGAAATACTGTTGAAGTAAAATTAGAGTCAAAGAAGGAAACATTGGAGGCTATCATTACAAAAATCCAAGATTGCAGCCAATACACAGTTGTATTCGATGATGGCGATATTACTACACTCCGAAGAAGTGCATTGTGTCTCAAGAGTGGACGACATTTTGCTGAAAGTGAAACGCTCGATCAACTTCCGCTCACCCATCCAGAACACTTCGGAAATCCTGTTATAGGTTCTTCAGGAAGAAGAGGCAGACGAACTAATAGAGCACAGTCTGACGATAGCGACAGTGAGGCGTCAGAATGGGCTGGAGGATCTGGTGGACTGAGCACCGGACCCGGAAGTACGATAACCGAGCGCGAACCTCACGCAGGTCGTGTTGTATTAGTACAGTGTTCCACCGGAGACAAAAAAAGGGCGCATCATTCGCATCAGTGGTTTCCAGGTCTTGTCGTCGCCCCCAATGCTCAAGATACTgttaaaataaaagtgaaagaTGACTATTTAGTCCGATCATTCAAAGATGGAAGATACTATACAGTCCCTAAAAAAGAGGCAAGAGAATTCCGAAGGAACAATGCATCGTCTGAGTGGATTGGAGTCGATGCTGCTATTTTATATCTCGACAAGGGCGTTTTGCCAGCTCATTGGGATCGTGATATACTATTCGGTCAAGAATCTCAATCACAATCGGATGAAATGGATTCCGAAGATagCATGGATGATGAACCACACGAGGAGAAAGATCATTTTGTAGCtcaattgtataaatttatggATGATAGAGGAACTCCTTTAAATCTCCAACCTACTATCGCTAATAAAGATATAGATCTATATCGTCTATTTAATGTAGTACAAAAACTAGGTGGTTATAACAGAGTgacaaatcaaaatcaatggAGGAAGATTTCGTTGAGGTTGGGCTTTGTTCCTGCTACTTCTAGTGTTACAAATTCGTGTAGACAAGCTTATAAAAAatttttacataGTTTTGAAGATTTCTATCGTAAACTTGGGGTTACACTTCTGTCACATCCTAGAAGTGGTAGAACGACAGGTCGAAGTCTTATTAGAGATAAAGATAAAATGCATAGTAGTTCAACACCAAAGTCTGCCAGTCCAGCTCCACCGACTGCAACAGTTTCTAgtgaagaaaaaatattggaaacgaGCAAACCGGCTGTAGTTAAAGGTAAAGATAAAGATAGTGAAAAGGATGCTAAAAGTAAAGATAAAGACAATGAAAAGGATGTTAAAAGTAAAGAAAAAGATTCCAAATGTAAAGACTTGGAAgtaaaagaaaaagaaataaaaccTCTTCCGAAAGAGAAAGATATAAAAGAGAAAGATATAAAGGAGAAAGATACAAAAGAGAAAGATAAAGATGTTAAAGAACCTAAAAATGGCGAAAAAGAAAAGGATATTAAAGGTAAAGAAAAGGCAAAGGATACCAAAGAGAAGGATATTAAAGAGAAAGATACTAAAGACAAATCAAAGGACAAAGAATCTTTGAAAGTGAAACAGAaagaagtaaaattaaaaactgaaaGTGTTGTAAACAGCAGTGAAGAGGATAGTGGGGATAATCAACCCTTAGCACCTTTATCccttaaaacTGAACcagtaataatagaaaaaccAGTTGAAAAAATTAAGGTACAAGATACACctaaatcaaaattattcaaaagtGCTTCCGGTACGATTGATGTAAAAAAATCTGAGAAAGGATCTGGGAAGAAAATAGCGCATAGACGAAATTCACTACCAAGATGTGCTCCCAGTAGTAAATCTGATCAAACTCCAGCTAAaaTCGAAGCTAGATGTAAATCATCATCGAGTGATTCATCAACCACAAATAAAAAACAGTCATTGGAAATAGATAAAGGCAAAGATAAAGACTCTTCTGGATCATCATCTACAGTAAAAAAACAAACGTCTTCCAGTGATAAAAATGACAGTGATAGCTCTAGTAGGGGTAGTAAAAATGGAAAAACACCTTCTAGAAGAAATTTAGTCACTCCAAATGATATCACTCCACCGCAGACTCCAAACAATTCAAACTCCCAAATACAACCAAGTAAAAAGCCAAGGAAACGAAAATTAACTGAGTCTCTAGATGCTTCCCAAATCATCTCTGCCGATGTTGGCGATAAATTGAAAGTTTATTATGGTCCGACTCATTCTGAATCCAAGGTCACTTATGAAGCTAAAGTTATCGAAATTACAGGCAAAGGTCCTGATGCAATGCTTAGAGTTCACTATACAGGTTGGAATACCAGATACGATGAGTGGATTAAGCCTTCGAGAATTGCTGATAATCTTTCACAACATTCTAAAAGCAAACACAAAGACAAGGGGAAAAAAAGTACTTCGAACAACAGTGGGCCACCAGAGAGTTCCGCTGGAAAGAAATCGCGTAGTCAATCATCGAATTTACCATCGACTCCCCTTTCTACCAAGCCACATACTAGAAATCGTGGTGGTTCTAATAATACAACTCCAACTACACAACCTTCAACTGATGCATCTGTTCAGTCCGAGTCTGATAGTGATTCTGAATCAGATTCTAGCAGTCagactaaaaaaataatagaagatAAAGTTCCACCCACTGAAAAagTTATTCGCGATACTTCTCCAGTGACTGAAAAAGTGTCTGATAGTGTGAAAGAAAAAATTGTGAAAACTCCCAAGTTGACAAAAACCCCACAAGTGAAACGTTCAGCTGAAAGTTCTCAAGCTAGAGTTAAGAGAACTCGATTAAAACAGGATGGGAATCAAAGCCCACGAGGAAGGGATTTTGATCTTAATGAAATAAGGTCAGAATTAAAAGGACTTGATTCTCCCATGAAGCAAGCAGGCAAAGATGCTGCAAAAACTGAGTCGCCCAATCAAGCTCCCAGAGAAGAAATAAAGGTGGCTTTTAAACACGATAAGACTCCTGAAAAAGTTGCAGAAGATATTTATGAATTCAAAGAACCTGAGCCTTTTGAATTCGAAGCTAGGAAATCAGAAGAAAAGAAGAAAAGGATGCCACCACATCGTATATTTGACGATATTCCTCCTTTAAAATTGAGTCCGAATGCTTCACCTGACAAACCCTTAACTTTGGAAGCTGAGAAAGAACCACCGAAATCTCATTATGATGGAGTTTTCGATAAATTATCTGCGGAAGCTGTTGAAGAAAAGGTAACAGAAATTACATTATTTggtgattttgaaaataatagaaTGATTATGCAAGAGGAGGATTCACAAGGCCCATTATTCACTTACCAACAGACTGAGCTGTTTTCTGACAAGTCGTATATGCCGATGTTCAAAAACTTTACGCCATCTAAAAATCAAGAAACTTATTCAAAGAAGGATGCCCAGAATAAAATGAGAGATATTGACGATGACTTTACAAACCCCTCTAAAGGCGAACAGTCATCAGATGAAGATCCAATTGATGCCGCCATTCAGAGAGTTAATGCTCATTCTATGTCGGATGATAGTAACGATGgcgatttattaattaaaactccAGCAACTCCAACAGCTCCAACTGGAGGTCTCTTATCCTCATTTACTACTGAACCGACTGTTGAAATTACTAatactaatattattattgaaaaaagtgAAGTTGTTGCAGATACTAAGTTAGTAATGCTAAAATTAAAACCAGAAATTCTAAACATTCCTGCAAATGTATTAGAAACAGTAGTTTCAAAGAAAGAACAATCGCTTGAAAATCAAAACACATCAAAAACCACCTCAGCAATGGATGTGTCTGAGCCAATCGATTCCAAGAAAGATACTGACAATGTAACTTCTTTTGCTGATGTCATAATGCCTGAACCGCCTGTTGGTTTCTTGATACATAAAGAAGGTCCTTCCATTGCTGAAAAAGTCTTGCGTGCTATCAGCAGCGCTAAACAAGCAGCTACATCTCCCGATTTCAAAGAACCACCCAAAGTGGAAACTACGAACACAAAAAGTTCTGCTTCTCCCAAATCTCCAGAACCAATTGAAACGATTATTGAAGAGAAAAACGTTGCTTCAGAAACTCTGTCTCCAAAGCCTGAGATTTTTAAAGTTGATGTTCCGGTGAAGGAAACACCGATTTCTGCGATTGTTGAAACTTTCATAAAGTCAGATTCCAAACCACCAAAATGTGAATTGACACCACTTGTTGTGTCTAAGAAAGAAACGATAGAACGAAGGAAAAGTGTAGCAGAACCGGCGTTGTGTGGAAAAAGTAATAAAGTTCTCAGTGAGACGATTCAAAAATTGTCCAGTCAGATCAGTCAACCAACGCCAGCTTTGCCACTGTCTGAATACCAAACAGATGATAGAAGTGATTCAACTGATAGTGACGATTCAGATAGcaggcTTATCATCGATAAGTTAAGTGAGGAAGAATCGCAGAGTTGTTTATCTGAAAGCAATGTCTCCCAACCAGTTAAAGTGCAAGTGGAAAAAGTTCCTGTTCCTCATTGGAGCAAAGCTGAACCTCTTCCCGATGTCGATTTAGAAAAGGCTTCATGTGTGACTGAATCCAATATAACGACAAAAGATTGTGCTACTAAACAATTGGAAGAAGATAGCAATATATCGTTACTTCTTTGCGAAGAAACCATACCTGGTAGTCCTGCGCCAGATAATCTAGGCGAAGCCGTAAAGGTCCCGAAACCTAGATTAACGCGTAATTTAGAAATGCCATTTGTTTCGGCACCTAGCTTAAATGTGGATCAAGCTCCCAAAGAACATTTAGTTCATAAAGATATTCCAAGAGAGAGAGATCCTCCTAGAGAGCATAGAGATGGAGGACCATTAATGAGAAATGAAAGAGATTGTATGGCCAATAACAATACTGCAGATACGGTTTTAGATAACACGCCTCCCATTACACCAGATAGCAGTGAAGGAAACATTTCTCCTTCAAGAGATCAACAATTATCTGATGTTGAAAATCAGTGTGATATGAAATTAATCGAAGATGATTGTAGAATAGCGGCATCATCTAAAAaatctaatgaaattgaaaaaagtagtTCAGGTAATATTATACGTACGAGTGCACCGAACAGTCCTGGAGCAGGTCCACGGAGAGGTCGTCGTCCTCGAGGTTGTCGTCTAAGTGATAGTGAGGATCAAATTACAGTTTCCTCATATTCGCATTCAAATCCACACAGACAGACAAAGTACAATTTTTATTCAGAAATTGATCCTATGTTGGACGGAGCTGCTCGAATAGCTTTGATCACATCACGGCTATCGGAGTTAAGGAAAGTGTATCATAGTTTAAAAGTAGAACTTGCTACAATAgacagaagaagaaaaaaaattcgacgGAAAGAAAGAGAAGCTGTAAAAGCAGCCAAGGCAGCGTGTTCGTGA
Protein Sequence
MATPQCRFLAGGASGCGRRLPHSSALAFVLVLALALALTLTLRPSAPEPRPPPGPLPLGPSVDTRRRAIAPFHRSSFVVRRSPFTVHRLAVLHCIALRRVASAGWETPLGQADDPPFLPVGTDVSAKYKGAFCEAKIKKVVKNIKCKVSFKGVGTGSVTVLDDAVKGTLRVGNTVEVKLESKKETLEAIITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGSSGRRGRRTNRAQSDDSDSEASEWAGGSGGLSTGPGSTITEREPHAGRVVLVQCSTGDKKRAHHSHQWFPGLVVAPNAQDTVKIKVKDDYLVRSFKDGRYYTVPKKEAREFRRNNASSEWIGVDAAILYLDKGVLPAHWDRDILFGQESQSQSDEMDSEDSMDDEPHEEKDHFVAQLYKFMDDRGTPLNLQPTIANKDIDLYRLFNVVQKLGGYNRVTNQNQWRKISLRLGFVPATSSVTNSCRQAYKKFLHSFEDFYRKLGVTLLSHPRSGRTTGRSLIRDKDKMHSSSTPKSASPAPPTATVSSEEKILETSKPAVVKGKDKDSEKDAKSKDKDNEKDVKSKEKDSKCKDLEVKEKEIKPLPKEKDIKEKDIKEKDTKEKDKDVKEPKNGEKEKDIKGKEKAKDTKEKDIKEKDTKDKSKDKESLKVKQKEVKLKTESVVNSSEEDSGDNQPLAPLSLKTEPVIIEKPVEKIKVQDTPKSKLFKSASGTIDVKKSEKGSGKKIAHRRNSLPRCAPSSKSDQTPAKIEARCKSSSSDSSTTNKKQSLEIDKGKDKDSSGSSSTVKKQTSSSDKNDSDSSSRGSKNGKTPSRRNLVTPNDITPPQTPNNSNSQIQPSKKPRKRKLTESLDASQIISADVGDKLKVYYGPTHSESKVTYEAKVIEITGKGPDAMLRVHYTGWNTRYDEWIKPSRIADNLSQHSKSKHKDKGKKSTSNNSGPPESSAGKKSRSQSSNLPSTPLSTKPHTRNRGGSNNTTPTTQPSTDASVQSESDSDSESDSSSQTKKIIEDKVPPTEKVIRDTSPVTEKVSDSVKEKIVKTPKLTKTPQVKRSAESSQARVKRTRLKQDGNQSPRGRDFDLNEIRSELKGLDSPMKQAGKDAAKTESPNQAPREEIKVAFKHDKTPEKVAEDIYEFKEPEPFEFEARKSEEKKKRMPPHRIFDDIPPLKLSPNASPDKPLTLEAEKEPPKSHYDGVFDKLSAEAVEEKVTEITLFGDFENNRMIMQEEDSQGPLFTYQQTELFSDKSYMPMFKNFTPSKNQETYSKKDAQNKMRDIDDDFTNPSKGEQSSDEDPIDAAIQRVNAHSMSDDSNDGDLLIKTPATPTAPTGGLLSSFTTEPTVEITNTNIIIEKSEVVADTKLVMLKLKPEILNIPANVLETVVSKKEQSLENQNTSKTTSAMDVSEPIDSKKDTDNVTSFADVIMPEPPVGFLIHKEGPSIAEKVLRAISSAKQAATSPDFKEPPKVETTNTKSSASPKSPEPIETIIEEKNVASETLSPKPEIFKVDVPVKETPISAIVETFIKSDSKPPKCELTPLVVSKKETIERRKSVAEPALCGKSNKVLSETIQKLSSQISQPTPALPLSEYQTDDRSDSTDSDDSDSRLIIDKLSEEESQSCLSESNVSQPVKVQVEKVPVPHWSKAEPLPDVDLEKASCVTESNITTKDCATKQLEEDSNISLLLCEETIPGSPAPDNLGEAVKVPKPRLTRNLEMPFVSAPSLNVDQAPKEHLVHKDIPRERDPPREHRDGGPLMRNERDCMANNNTADTVLDNTPPITPDSSEGNISPSRDQQLSDVENQCDMKLIEDDCRIAASSKKSNEIEKSSSGNIIRTSAPNSPGAGPRRGRRPRGCRLSDSEDQITVSSYSHSNPHRQTKYNFYSEIDPMLDGAARIALITSRLSELRKVYHSLKVELATIDRRRKKIRRKEREAVKAAKAACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-