Apln014184.1
Basic Information
- Insect
- Arctia plantaginis
- Gene Symbol
- stc
- Assembly
- None
- Location
- CADEBC010000561.1:17347295-17364120[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1e-08 9.2e-05 22.4 13.1 1 16 59 74 59 82 0.90 2 4 1.9e-05 0.18 11.9 4.2 1 13 89 100 89 103 0.95 3 4 1.3 1.2e+04 -3.6 0.9 15 18 110 116 109 117 0.69 4 4 0.98 9e+03 -3.1 0.2 8 11 252 255 251 255 0.78
Sequence Information
- Coding Sequence
- ATGGTACAGCGAGCAAGACGGATTGTGGTACAGCGATACAAACGTCAGATCTCGTTCAGCGCTGGCGCTTTTCATCGACGTTTGCCTGTTCGCTGTTTTGCTGCAGAGCGTAAGACGATACCTTGTTCACAAGAGGAGTTCTCGTGTGGTCTGCCTGGTGGCAAACCTCTGCCCTGCGGCAAACACACGTGTATCAAGACATGTCATAAAGGACCTTGTGATACTGGCAAATGCACGCAGGCGTGCACGGAGAAGCGTCCGTCGTGCGGGCACCCGTGTGCGGCGCCGTGCCACGTGGGCGCGGCGCCGCGCTCGGCCGCCGCCGCGTGCCCCAGCGCCGCGCCGTGCCGCCGCCTCGTGCGCGCCACGTGCCCGTGCCGCCGCCGCCACGCCGAGCGCTACTGCTGCGACAACGCCCGGGACTACGCACGGATGATGAGCGCTTTGGCAGCTACAAAAATTCAGGAAGGTGGTTCCGTCGATTTGTCTGAGAGACCTGGAAACATGCTCAAGAcGCTGGAGTGCGACGACGAGTGCCGCGTGGAGGCGCGCACGCGCCAGATGGCGCTGGCGCTGCAGATCCGCAACCCCGACGTGTCGGCCAAGCTGGCGCCGCGCTACTCCGACCACGTGCGCGCCACGGCCGCGCGCGAGCCCGCCTTCGCGCAGCTCGTGCACGACAAGCTCACCGAGCTCGTGCAACTCGCTAAAAAGTGGAGCGTACCAGTGTTCAAGGGTCTGGGATGTTTGCCGAACACGTGCCATTTGACAGTGAGGTCTGATGTACAACCAAAAATAGATGCTCAACGTAAAGTACCATATGCTGTTCAACTACAACTTAAAGAAGAATTGGATCGCATGACGGAGTTGGGAGTGATAGAGCCAGTGTCTAAGCCTACCTCTTGGtcAAAGCAGAAGACGCGCGCGCACTCGTTCCCGTCAATGAACTGGCAAAAGCGTCAATTCATCCACGAGCTGTGCGAACATTTCGGGTGCGAGAGCGTGGCCTATGACGCCGAGCCCAATAGAAATGTAGTCGCTACAGCCGATAAAGAGAAGTCGTGGCTGCCGGCGATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCGCGTGCCGGGCCCCGTGCTGCGCGCGCCCGCGCCCGCCGCGCCCGGCCCCGCGCCCTCCGCCGCGCCGCACCCGCTCAACAAATCAACCAGCGGTTGGGCTACACTAACCTCGACAAACGCCTGGGCGGCTCGCAGCCAACCGAAACAGGCTCAGCAACCACCGGCCGAGAAGATTGACTACTTCGACAATCCGCCCGACAACTAA
- Protein Sequence
- MVQRARRIVVQRYKRQISFSAGAFHRRLPVRCFAAERKTIPCSQEEFSCGLPGGKPLPCGKHTCIKTCHKGPCDTGKCTQACTEKRPSCGHPCAAPCHVGAAPRSAAAACPSAAPCRRLVRATCPCRRRHAERYCCDNARDYARMMSALAATKIQEGGSVDLSERPGNMLKTLECDDECRVEARTRQMALALQIRNPDVSAKLAPRYSDHVRATAAREPAFAQLVHDKLTELVQLAKKWSVPVFKGLGCLPNTCHLTVRSDVQPKIDAQRKVPYAVQLQLKEELDRMTELGVIEPVSKPTSWSKQKTRAHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRRVPGPVLRAPAPAAPGPAPSAAPHPLNKSTSGWATLTSTNAWAARSQPKQAQQPPAEKIDYFDNPPDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -