Apln010982.1
Basic Information
- Insect
- Arctia plantaginis
- Gene Symbol
- -
- Assembly
- None
- Location
- CADEBC010000528.1:3714406-3739527[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.0099 0.61 10.7 1.5 1 23 1626 1648 1626 1648 0.99 2 10 9.5e-05 0.0058 17.0 0.2 1 23 1709 1732 1709 1732 0.98 3 10 0.24 15 6.3 0.1 2 23 1741 1763 1741 1763 0.94 4 10 1.1 70 4.2 0.1 3 20 1775 1792 1774 1794 0.94 5 10 0.022 1.4 9.6 4.1 3 23 1804 1824 1804 1825 0.96 6 10 0.12 7.2 7.3 0.1 3 23 1841 1862 1840 1862 0.95 7 10 9.3e-05 0.0057 17.1 3.3 1 23 1878 1900 1878 1900 0.98 8 10 0.064 3.9 8.2 0.0 1 23 1906 1928 1906 1928 0.96 9 10 0.003 0.19 12.3 6.7 1 23 1934 1956 1934 1956 0.96 10 10 0.0005 0.031 14.8 5.9 1 23 1962 1985 1962 1985 0.96
Sequence Information
- Coding Sequence
- ATGAATAATAATCCCAAACCTTCAAACCACCATCCAGAGAGCATCATATCCGTGAAGTGTTCTTGTGTACACTGTGATTCCAATTCTTGTTTCGCAAAAAGAAGTAAGTATCATTGTGCATTTCAAAATTGCAATGATTCAAAACTTAGTCACCCCGAAAACGGCAACAGAGAACTTAGAAAGAAACGTTGTGATGACATAAATGCAATCTATCTAAATCCAGCGAAGCCTATGGTTAATAAAGAACTCGAGGAATTAACTGATGATGAAGTTAATTATGAatcagaaagaaaaatattaatagagaTGAATCAACCATCGCCGCATTCTTTAGACGAATACTTAGATCGCTTATTATGTGTAGATAAAGCCTCATCTAAATTCAAGCAAAAACCGCCATCGTTAAGTGGATATATAGAAATTATATCAGAGAATGCTGCGTACAAACGAAAGCTTAATTTGTTTAACGAATATGTAGAAAATTTGAAAGCAGGGAAATATTCGAAAGGATGTGATGACGTAACTTGTTTCGCAGCTATTCAGAATTCATTACGTCCACAGCAATGGTATAATAGACTCTCAGAAATATCGGGTCAgcctaaaacaacaacaacaaattgtAAAGGTAGAACATTCCACAATTGTTTAGATAAAGAAAAACCAAGTGCTCAACATGTTactcaaattcaaaatacaacAATTTCAAATCCCAAAATGAATTATAAGTCTTCGAAGTCAAACACCGAAGCGCCTAACGTTTTTTGTGGAAATTGTAACGATTCTAGTAAAACACCTGCATCCAAtgataatacttattttaagtatgatattttaaaaaaattgaaagaagCATGCATAGCGTGCAGTTGTAAAGTATGCGAGTGTATTGCTCCAAAATCGATTACtaatgaaatatgtaaatgtaaaccTTGTCAATGTGCAGAATGCACGGGTTACGCTGCAACACAGTCAATTTACCGGGGCCCCCAACTGTCTCCTACATTAAGTTGCAGTTGCAGTGAATTTAGTAACCAAAGTGCAATAAAGATACAGGATAAATGCTCTTGTTCACCGTGCGAGTGCAAAATGTGTAACATGAATAATTCAGCTAAATATACTGATATGCGAAAGCCACCACTAGCGCATCAACCTTTGGTGGTAGCGTCTGTATCAGGTGTTGCATGTACCTGTTTACCATCTAACTGCAGTGAATGTCTACGAAGTTATACGGACGTACAAAAGTTTACCGAtgaaaaatacaaatgtttagACAGAAGTATAACTAATTGTAACCAACCAGAAGAGACAATAAGTGAAATTTACCGTCATTCAAatagcaaaaacaaaaatattaaacagaattTTGTGGCCTTGTGTACTGTTGGCGTTGGTCCAATCAAAAAAGGTGACGTATTAAGTCCCTCAGCGCACCAGACCAAACTGGAAAATCTAAAGGTAGAAGGAAAGGCGACATCTACACcttcatataataaatatgaatcacGTTACAGAgacgtaaatttatatattaattctcAGACGGAAAATATATGTCCTAAAGATGTTACGTCCCAGCCATCAGTTAGTCGGCAAGCAAAGCGCGATACGGGAACAATGTTATCAAAATCCTTTAATAGATTGAATATATTGCAATGTGATGCGTATGTTCACAGTCAAGAATTTAATTTACCTAAACCTGTACTAAGAAATAGTTTCACGACGTCTAGAAGTCGTAGTAGCATTTACTCAATTACTAGACCGCCATCTCAAGTAAATAATAACGGGAAGCCTGAGTCGGCAAATACTCAGAAATCTTTAAGAAGGTCCTATCATAGATCCGGTCACGAGAACAATAAACTAGGCGTAAATAATATGTTCTCAGAAAAACAAGAAGATAAACAATCTCCTTTTAATATTCTGGCAGAAGTCACTTTTTCAAAAGTGAatgaaaatgaaagtaaaaacgGTTCATATTCTAATGGGCAAGTATTAAAAGGCGACATcggaaaatataaaactaataattgtgttttaCAACGTGCTAACAATATTATCACAGAAATTACATCAACAAATAAAGGAAGTAAAAGCAAGAATAAAGTTTGCTCTCCTAATGGACAAGCTCAAGGAAAGGAGTcaaacaaaatagaaaaatcaaataatgaaattgtgtCGAACAATAATCAACCTATGAAAAGCTTTTCTACCTCCGCGATAACGACACTTGAGAAATTAATTGCTTTAAGCtctgaacaaataaaaaacaaaagcagTAAGTCATCAGTTAATAATGGCAATAACTTTAATTGTTTCCGTGTGCTACAGAATTCGAAACAATGTAGTTTGATTAACAGTATCAACCATTATAACTCACCAAGAGTAAAATTACGTGACTTGTCGACAAATAGTAATTTATTGgccataaaaaaggaaaatgaaaaGGCTCGTCAAACTATAGAAGATGCAAAAAAGTTTACTTTACACCTACTAGGCTTGTTAGAAATGTATGAAAAAGCAAATAATGAATTTGTAAAAACCTCTGATAAACTTAAAACTGCCTATAGATCTATATTAGATCGAAACTTGGTccacaatgaagagaaaaatatcaaaactacagaaaattataatgtaattatagaAAGTAAATCAGAATCGCCATTGAATGAATACGCAACTCCAACTTTGAATATAAATGTGTGCTCAAAATATGAGCCGGTATCATTTGAAGATATCATTGCAAaacgtttaaattattgtatgaaaACTTCACCACAGCCAGAATTAGGTCATATGAATGGGCTTACATCGAATATAGATTCGGAAGTAATGGAGACTGTAAGTAAAAATGCAAACAGTGAAGAAGATGCACATAAAAACTACGAAAGAATTTGCTACGCTAAAGTGCAAAATGGACATAATAAAAGGTATTTCAAGCACAAAATTAACCCTGAATATGACAAAAACCTGCATTTTAATACAAGCAAAATACTAACAGAAATCACACGGTACGCAGATTTAAAACCAGACGAATTTGAGTCATTGATTGAGAGTGTTGAGCATCTGTCCATATCCACTTCTACAGatacaacaaaacaatatataattaatcCTAAGACGAAAGAGGAAGTAGAAACAAAAAGTCCAATATGTAGAAAGAGTTTTGGATTCACGGCTAAACCGAATATTATAAGTAAGGGAGCAGGCATAAGTGGAGTTTCATCGTTAGAAGTTGATACAAAGGGGACGATGCTGTCAATATCACTTCATAATAATACTACAAATacgataaaaattgaaaaaagtcacaaaaatgAAGCTTTGagtcAATTACAGTTAGAAGTAAGAAAACTCTTGGAGCTGGCAATCTTAGAACCTTTAAACTACGCAGATGACTCTGAAGATAGCTTGCTAGAATCACGAAGTCTCTTTGATGAGagtatattgaatttgaaaattatgGAACGACCAAGagaaaacaaatcaataaatgAACAGCCCGAACAAGCCGATAAAGAAGTATGGTGCACTGACCAGAATTTATtgGACGACTTTAAGAGACAAATCAGAGAACAGCTGAAAGTAGCCAGCATGCACCCACTCATGAATAAACAGAGCAGTCTTTTCTCTTACAGCTGCAAAAGTgaaTGTGAAGACCTGAAAGCAAAGTTTCTGGTTGTGAGAAAAATATCAGAGCACACTGTATTAATTGAATGGAGCCAACCTCATGGACTTAGCGTGCAAGGATACGAATTACTAGTGGATGGGAGGACGGTTCAGACAATAATGAACCCTTCAAAATGTATGACGGCCATAACTTGTTTGCCACACGCTGACAAGATACTCCTCACGATTCGTACCATCACGTTTGTTATGCCTGAAGTTGGCCATTATCCGACTAACACTACTATTTATCGGCCGCACCAACAaatggaagtatttaaatattgtagagTATGTTTGGTGACTGATGTAAAGATGCACAGTCTGGACATAGTTTCAAATGAATCGATAGGACTCATTTATTCTCATTTGGCACAGATTCGGatCTGTGATAGAAATCAACATGTATGTTTTGAATGTGCCAGTTTACTGCAGAAATATCAGTTATTTAAATCAAAGTGCATTAGGGCTCACAATATACTATCAAATATTACAGTTAATTCAACAGAGATAACAAAACAAGTAATTCTGAACATAGACAGGAAAGAAAACAAATTGGAATCTTGTTACACATTATctacaataaaaacatgttaCGATATCCCTTTGGAATATTCAAAAAATGAAGTCACTGAAAcagataaaatatctttaaataaacatcAAGAAATTAATATTGCAGAAGTTGATATTAAACCTGAATTCAAAGACTTATATGATAGTAGCAATCCAACTTCTCATATGTTAACTGAAGATGACTGCATTGAGTCTGAAAAAGTAatttcatcattaaaaaaattaacacacacTACAAAAGATCCTAAAATaagaaaagcaaaaataaaaaacgaagcATTTGTTCCTGATAAAGAAGAAAAATGTGATCCTTACGAATCTCTTGATGAGGTAAACGACAATGATCTGATAGAATCGTCTGAAGAGATTAAAACATCATCGCAAAAacctcaagaatcaaagaataaaaaacaaaaatacacaaaagaaAGCAGTGATGATGATCTTAGTGATAATGAACCGTTATCTAAAAGAGTAACTAAAGACGTGAGCGATATACGAAAGCCTgttaataagaaaaacaatatagAACCTGATTCGTTTAATGACTACACCACGGTTAAGTTCCTTACACTTGAAGACGCCAAAAAAGAGTTACTTTCACGAAAAGAATCTAGTAATTACAAAAGGTCGCCGTTTAAATGTGAATACTGCTTTAAAGGGTATGAAGCACAAACAGCTTTTGACAATCATATGAAAAAACATAGCAGAGAACATGGCGACTATGAATGTGACGTATGCTACCTCCGATTTCTAAAACCCATATACTTATGTAAACACAAGTTGTCATGtcacaaaagaaaatttatttgcaaGCTATGCCCATACATATGTTATTGCATGGATCAGGCTAGAACTCATGTCAGTCTTCACCAAGGAAAAAAATATCCGTGTAAAGATTGTGGAGAAATATTCAGTATGCCGAATAGTTTACTAATGCACAAACGCATGAAGCACTTTGACGCGTCGGTGCCGGAGAACGTGTGTGAGTTCTGTGGGAACGTTTTCGGTTCTGCTCGAGGACTATTTCTGCACAACATGAAGTTGCATCGGACGGACAAGAACAACAAAGAAGGCCCTAATTGCGAAGAGTGTAGCGTTCATTTTTCATCAGATGTCGCCTGGAAGAGACATCTAGTGCTGTCCACCAAACACATAGTGATTAACGGGTGCAAGTATTGTGGTGAGCGGTTCACTAACGTTGAGGAGTTGAAGTGTCACCAGCGAGCTCATCACCCGCGCTTCAAGCAAAAGAAATGTGACAAGAAACTACCAGCCGCTTGTCCTGTTTGCAATAAGTGGTTAACAAATCGCGTGGAATACAATAGGCACATAGCAAGTGAACACCCTCATTCGGACGAGGCGAAGAAATTGATCGAACATGACCTCCCGTTCGTGTGTGAAGTGTGCGGACAAGCGTTTAAGCAACAGTGCTTCCTGACGTACCACCAGCGCAAGCACACGGGCGAGCGGCCGTACGCGTGCGGCGCGTGCGCCAAGGCGTTCCCGACGGCCGGCGCGCTCCACGTGCACCGCGCCGTGCACGCGCGCGCGCGGCCCCACGCCTGCCACCTCTGCCACCGACTCTTCTCCTTCAAGAGCGCGCTCAACAAGCACTTGAAAGTGCACCTCGGAATTCGTCCCCACAAGTGTACAATTTGCGACAAAGGTTTCATTCACAAGTGCGACTTGAAGCTCCACATCAAGTACGTCCACGACAAAGTACCTTGGCCGAAGAAGAAAAGCAAGCGAAAGGCAACAGACGATAATGCGACCTATTTAGACTACAATTAA
- Protein Sequence
- MNNNPKPSNHHPESIISVKCSCVHCDSNSCFAKRSKYHCAFQNCNDSKLSHPENGNRELRKKRCDDINAIYLNPAKPMVNKELEELTDDEVNYESERKILIEMNQPSPHSLDEYLDRLLCVDKASSKFKQKPPSLSGYIEIISENAAYKRKLNLFNEYVENLKAGKYSKGCDDVTCFAAIQNSLRPQQWYNRLSEISGQPKTTTTNCKGRTFHNCLDKEKPSAQHVTQIQNTTISNPKMNYKSSKSNTEAPNVFCGNCNDSSKTPASNDNTYFKYDILKKLKEACIACSCKVCECIAPKSITNEICKCKPCQCAECTGYAATQSIYRGPQLSPTLSCSCSEFSNQSAIKIQDKCSCSPCECKMCNMNNSAKYTDMRKPPLAHQPLVVASVSGVACTCLPSNCSECLRSYTDVQKFTDEKYKCLDRSITNCNQPEETISEIYRHSNSKNKNIKQNFVALCTVGVGPIKKGDVLSPSAHQTKLENLKVEGKATSTPSYNKYESRYRDVNLYINSQTENICPKDVTSQPSVSRQAKRDTGTMLSKSFNRLNILQCDAYVHSQEFNLPKPVLRNSFTTSRSRSSIYSITRPPSQVNNNGKPESANTQKSLRRSYHRSGHENNKLGVNNMFSEKQEDKQSPFNILAEVTFSKVNENESKNGSYSNGQVLKGDIGKYKTNNCVLQRANNIITEITSTNKGSKSKNKVCSPNGQAQGKESNKIEKSNNEIVSNNNQPMKSFSTSAITTLEKLIALSSEQIKNKSSKSSVNNGNNFNCFRVLQNSKQCSLINSINHYNSPRVKLRDLSTNSNLLAIKKENEKARQTIEDAKKFTLHLLGLLEMYEKANNEFVKTSDKLKTAYRSILDRNLVHNEEKNIKTTENYNVIIESKSESPLNEYATPTLNINVCSKYEPVSFEDIIAKRLNYCMKTSPQPELGHMNGLTSNIDSEVMETVSKNANSEEDAHKNYERICYAKVQNGHNKRYFKHKINPEYDKNLHFNTSKILTEITRYADLKPDEFESLIESVEHLSISTSTDTTKQYIINPKTKEEVETKSPICRKSFGFTAKPNIISKGAGISGVSSLEVDTKGTMLSISLHNNTTNTIKIEKSHKNEALSQLQLEVRKLLELAILEPLNYADDSEDSLLESRSLFDESILNLKIMERPRENKSINEQPEQADKEVWCTDQNLLDDFKRQIREQLKVASMHPLMNKQSSLFSYSCKSECEDLKAKFLVVRKISEHTVLIEWSQPHGLSVQGYELLVDGRTVQTIMNPSKCMTAITCLPHADKILLTIRTITFVMPEVGHYPTNTTIYRPHQQMEVFKYCRVCLVTDVKMHSLDIVSNESIGLIYSHLAQIRICDRNQHVCFECASLLQKYQLFKSKCIRAHNILSNITVNSTEITKQVILNIDRKENKLESCYTLSTIKTCYDIPLEYSKNEVTETDKISLNKHQEINIAEVDIKPEFKDLYDSSNPTSHMLTEDDCIESEKVISSLKKLTHTTKDPKIRKAKIKNEAFVPDKEEKCDPYESLDEVNDNDLIESSEEIKTSSQKPQESKNKKQKYTKESSDDDLSDNEPLSKRVTKDVSDIRKPVNKKNNIEPDSFNDYTTVKFLTLEDAKKELLSRKESSNYKRSPFKCEYCFKGYEAQTAFDNHMKKHSREHGDYECDVCYLRFLKPIYLCKHKLSCHKRKFICKLCPYICYCMDQARTHVSLHQGKKYPCKDCGEIFSMPNSLLMHKRMKHFDASVPENVCEFCGNVFGSARGLFLHNMKLHRTDKNNKEGPNCEECSVHFSSDVAWKRHLVLSTKHIVINGCKYCGERFTNVEELKCHQRAHHPRFKQKKCDKKLPAACPVCNKWLTNRVEYNRHIASEHPHSDEAKKLIEHDLPFVCEVCGQAFKQQCFLTYHQRKHTGERPYACGACAKAFPTAGALHVHRAVHARARPHACHLCHRLFSFKSALNKHLKVHLGIRPHKCTICDKGFIHKCDLKLHIKYVHDKVPWPKKKSKRKATDDNATYLDYN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -