Basic Information

Insect: Arctia plantaginis
Gene Symbol: RREB1
Assembly: None
Location: CADEBC010000540.1:2824067-2846326[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.073 4.5 8.0 0.4 1 23 94 117 94 117 0.94

2 11 0.018 1.1 9.9 0.1 1 23 309 331 309 331 0.97

3 11 0.00098 0.06 13.9 0.4 1 23 340 362 340 362 0.99

4 11 0.0006 0.037 14.5 2.0 1 23 368 391 368 391 0.97

5 11 0.0024 0.15 12.6 1.6 1 23 738 761 738 761 0.96

6 11 0.0002 0.013 16.0 1.3 2 23 955 976 954 976 0.97

7 11 0.091 5.6 7.7 6.5 1 23 982 1005 982 1005 0.97

8 11 0.065 4 8.1 1.4 1 23 1038 1062 1038 1062 0.94

9 11 0.0047 0.29 11.7 0.4 1 23 1086 1109 1086 1109 0.97

10 11 0.0015 0.093 13.3 0.2 2 23 1149 1170 1148 1170 0.96

11 11 0.023 1.4 9.5 5.3 1 23 1176 1198 1176 1198 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.073	4.5	8.0	0.4	1	23	94	117	94	117	0.94
2	11	0.018	1.1	9.9	0.1	1	23	309	331	309	331	0.97
3	11	0.00098	0.06	13.9	0.4	1	23	340	362	340	362	0.99
4	11	0.0006	0.037	14.5	2.0	1	23	368	391	368	391	0.97
5	11	0.0024	0.15	12.6	1.6	1	23	738	761	738	761	0.96
6	11	0.0002	0.013	16.0	1.3	2	23	955	976	954	976	0.97
7	11	0.091	5.6	7.7	6.5	1	23	982	1005	982	1005	0.97
8	11	0.065	4	8.1	1.4	1	23	1038	1062	1038	1062	0.94
9	11	0.0047	0.29	11.7	0.4	1	23	1086	1109	1086	1109	0.97
10	11	0.0015	0.093	13.3	0.2	2	23	1149	1170	1148	1170	0.96
11	11	0.023	1.4	9.5	5.3	1	23	1176	1198	1176	1198	0.97

Sequence Information

Coding Sequence: ATGCAGGGAGCCGCCAGCGCCCCCGCGCCACCCGCGGCTGAACCGGCTTCATCACAACaaatcaAAACAGAGGAGGTCATTACTCAAGCTAAAATTGAGGCCGAAGAGGAAATGAACGAGGTGACAATAGAAAGACAAGAGTTCAGATCCAATAGGACTATGAGCATCGACAGTGACAACAGGTCGGATAGGAGCGAAGAAGAAGACTCAAGGAGAGCCCGCAAGAGGGCGGCGTCTACATCCCCATCTAGAATGCCCATGGACAAAAGAATTGCTCGATTCGAGTGCCCCAAATGCAGACAGAGGTTTGACTCGGTAAATGCATACGATATTCACCGCTATACCGCTCACAGTGATGACACCAAGACTGGTTTTGACGACCTAACCTTTGTTGATTTCTCAAGCAAAAAGTTCGCGGAAATCGCTCGTGGAGTCTGTGAGAGAAATCCTCACGTGACGATAACGAATCAACGTTACAGGTGCGACCTCTGCGCTAGAGATTTCCCATGTGGGCAAGCCTTAGATATTCACAGAAAATCGTGCGCATCCAATACGCGAATTTCGAGCCCCGATAGAGAACATAGGGAAGATTTCTTTGCGAAGCTAGATCTTAGAAACAGGTCTTTTGGTATCTCTGGTACGTTGACACCACCGATGGAAAGATTCACTCCTAAGTTCGACGATGGTCACCTGACTACAAATGGAATTAGACACATCGATGCCGCCCGCGACTTGGCAGATATTCAATCGATATTAAACGTTACGTCAGCTGGTGGCCTTTTAGAGAGGCTTACTGGCTCAAGAGTGGCGGCTTTAGAAAGCGCCGTACTCACTCCTCCTGATACCATCATGAAAGAGCGAGATCAAGAAGAAACGCAAGACAATTTTGCGGCTGAATTCAGACGTATGAAATTGCGCGGCGAATTCCCTTGCAGGTTGTGCCCGGCCAAGTTTCCAAACCTTAGAGCTTTGAAAGGACATAACAGAGTACACTTAAGCGGAACTGGTCCGGGACCATACCAGTGTAACATGTGTCCACATGCTTCTTTAGATAAGGCGGCTTTGGTGCGTCATATGCGGACGCATAACGGTGACCGACCTTACGAGTGTGCCGTATGTAATTATGCTTTCACAACAAAAGCTAATTGTGAACGCCACTTGCGTAACAGACACGCTAAAGTTACTAGGGAAGATGTTAAAAGATCCATTATTTACCATCCGTCTGAAGACCCAAATAACGATGAAGTCAACTCAAAACTTGCTCGAGATGATGTGAAGAGATCACTAGCCTTTCATACACCTGATATAGATAGGCGAATTGAGGGCACAGGTCGCGATACACCGCTAACACACTTCACCCCAAGCTTTATCACAGACCGACATCCAGTCACAAATTTGACAACAAAGGCAGTACCTGAAGCACCTATCACCTCCAGAGATCCTGAACAACCTGCACCCCGAATAAAAGTCAAAGGCATTGGTCAGCTGACACAAATCCCTGAATTTAGACCTCCAGAACTATCTTACAAGATAAATGAAGTCGGAATAGAACCATATGATGAAGAAGCTCCAGTAGACCTAAGCACAAGTGACAACAACAGTTGCGATGTTCTTGACCTCAGCAAAAAGAAACGTGATAACGATTCTGATGAATCTAAAGCCCCACCACGTACATCTTTCGAGCCCGACCCAGCTAGCGTCGCTGCATCGGCATTTGAAAAGACAAGATTTCTTTTGGCTCAGCAGAGACTCTTTGAATCATCTCTCCCCAAAATCGATCCAGCTTATTATGCCTCTCAGCTATCACAATTATATGCTGGTGCGGTCCCTAGTATTCCAGGTCTGCCATTACCGCCTTCCTTTCCTATCGCTCCCTACCTTCTTCAGCCATCTTTTTTTCCTCATCCAACTGACTCACAAGAGTTAGTGGAAATTAAGCAGAGGATACAAAAAGAGATAATACGTGGACTTAGCATGTCTGGGGGTAGACTCGTCCCTAATGAACAggaaattcaacaaaaaatagaaCCTGAAGAGGAAGAAGCGAAACCACCTCAAGTGATTTCCCCTGAACCCTCACCACATTCCGAATCTCCACGGCCTCAAATGAATAATAGCATAGTTCCACAGACTGATTCAGTCAAAATGGTTATAAAAAACGGTATCCTCATGCCAAAACAGAAACAAAGGCGATACCGAACCGAAAGACCCTTCTCGTGCTCTCAGTGTTCTGCACGCTTTACTCTTAGGTCTAATATGGAGAGGCACGTAAAGCAGCAGCATCCTCAACACTGGAGCGTTAGGAGACCAGCGCCAAGAGCTCCGCCCCCATACCCTACTCCCGATTCAATCACTGACCGCATGAAGTTTGCTCTATTAGCTCGCCATTTGGAACGACCATTACAGCAATCTGAAAGATCACCCGCGCGACGAGACTCTGATGAAGTCGCTGACAATGAAGAAGATGAAGAGGATACCTTAGTAATAGACGAAGAGCCTGACCATGACATTAAAGAGGATCACACAGCAGCTCGCCGTGCTGCGGCTGAAATTTTAATGGCTACTTGTCAACAAGAAATTACCAAAGACTTTGATCTTAAAATTGCTGGCAGTTTGATTAATAAACCGGTGACCATTAACAACGAGAAGACTAATATTGAAACTAATCCCATTCCGTTGAATCAAGACTCTTCACCAGTAACGGTTGTACCAACACGCAGTGATGAAGAAGAAGATGAAGAAGGATTAGTTGCCTCCACCAGTGAAGGAAATAACTCTGGAAGCGATGAGAATAAATCTGAAACGGATACAGCTCAGCCACCAAAGAAAAAGTCAGCGTACAGCCTTGCGCCAAATCGGGTATCCTGCCCCTATTGTCACAGAAAATTCCCTTGGTCGTCATCACTACGTCGTCACGTGCTCACTCACACTGGACAGAAGCCATTTAAGTGTCCGCACTGCACATTGCTGTTCACCACTAAGTCTAACTGCGACCGCCATCTGTTGCGAAAGCATGGAGGATCAGCACGAGCAATCTTAGCTGAACCTATTCCTGAAACCATGTCTCCTCCTCAGCCAGTGAACGACAATCGAGCTGTTCCTGACAGGCCATATAAATGCACATCTTGTCCCACCGGTACTTTTTCTTCTATGGAAACATTAAAGAAGCATATGTCTTCAAGGCACGGAAATGGTTCCCAACCAGGCTCTCCAACTCCAGAAGTTGTGGAAGAATCTGCTGAAGGTGGTCTAGTCTTTAAGTGCCATCTGTGTGAAGCATCATTCAGTGACAGAAATGGTGCTTTAAACCACCTGGCTACTGGTCATACCTCAGAATATGAACAGCTTCTGAGCAAAGGAGCTTTAGACGCTAATAGTGACAGAAGTGAAAGTGCGGATGACGATGAAAGGGGAAAATTTCCTGATCACGCTAATAGAAAGGTGGTGTGCGCATTTTGTGTCCGTCGCTTCTGGTCGGCTGAGGACCTCCGCCGTCATATGCGAACCCATTCGGGTGAGAGGCCATTTGCCTGCGACTTGTGTCGACGTCGCTTTACATTAAAGCACAGCATGTTGCGCCATAGAAAGAAGCACCGCGAAGAAATTACTGATGATGAGGAACCCTCACCACCGAATACACCGATTGAAGAGAATGTTACTAATGGGTATCGTTACCAAGATGAGGATGGCTCGGGCAACGAAATCCCAAGCAACGTAAATAACAACAATTCCCCTCCATCGGCCCCTTACGATAAGAAGCTCAAACTTGATATGACATCGCGGAAATATTCTTCAGAGGCAGAGAATGACCCCGAAAACAGCGATCTCATTGGCAAGCTACTGGTAGGTGCAATAAATTACCAAAATGGGTGA
Protein Sequence: MQGAASAPAPPAAEPASSQQIKTEEVITQAKIEAEEEMNEVTIERQEFRSNRTMSIDSDNRSDRSEEEDSRRARKRAASTSPSRMPMDKRIARFECPKCRQRFDSVNAYDIHRYTAHSDDTKTGFDDLTFVDFSSKKFAEIARGVCERNPHVTITNQRYRCDLCARDFPCGQALDIHRKSCASNTRISSPDREHREDFFAKLDLRNRSFGISGTLTPPMERFTPKFDDGHLTTNGIRHIDAARDLADIQSILNVTSAGGLLERLTGSRVAALESAVLTPPDTIMKERDQEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLARDDVKRSLAFHTPDIDRRIEGTGRDTPLTHFTPSFITDRHPVTNLTTKAVPEAPITSRDPEQPAPRIKVKGIGQLTQIPEFRPPELSYKINEVGIEPYDEEAPVDLSTSDNNSCDVLDLSKKKRDNDSDESKAPPRTSFEPDPASVAASAFEKTRFLLAQQRLFESSLPKIDPAYYASQLSQLYAGAVPSIPGLPLPPSFPIAPYLLQPSFFPHPTDSQELVEIKQRIQKEIIRGLSMSGGRLVPNEQEIQQKIEPEEEEAKPPQVISPEPSPHSESPRPQMNNSIVPQTDSVKMVIKNGILMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPAPRAPPPYPTPDSITDRMKFALLARHLERPLQQSERSPARRDSDEVADNEEDEEDTLVIDEEPDHDIKEDHTAARRAAAEILMATCQQEITKDFDLKIAGSLINKPVTINNEKTNIETNPIPLNQDSSPVTVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSETDTAQPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCTLLFTTKSNCDRHLLRKHGGSARAILAEPIPETMSPPQPVNDNRAVPDRPYKCTSCPTGTFSSMETLKKHMSSRHGNGSQPGSPTPEVVEESAEGGLVFKCHLCEASFSDRNGALNHLATGHTSEYEQLLSKGALDANSDRSESADDDERGKFPDHANRKVVCAFCVRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHREEITDDEEPSPPNTPIEENVTNGYRYQDEDGSGNEIPSNVNNNNSPPSAPYDKKLKLDMTSRKYSSEAENDPENSDLIGKLLVGAINYQNG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00961349;
90% Identity: iTF_00823382;
80% Identity: -