Apln013529.1
Basic Information
- Insect
- Arctia plantaginis
- Gene Symbol
- THAP3
- Assembly
- None
- Location
- CADEBC010000557.1:159510-200926[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.0027 0.16 12.5 0.6 1 23 341 363 341 363 0.98 2 20 0.091 5.6 7.7 4.5 1 23 370 393 370 393 0.93 3 20 0.00015 0.0092 16.4 1.4 1 23 424 447 424 447 0.98 4 20 0.045 2.7 8.6 1.6 2 23 452 474 451 474 0.93 5 20 0.34 21 5.9 0.0 2 21 486 505 486 506 0.93 6 20 5.2 3.2e+02 2.1 0.1 3 23 561 582 559 582 0.94 7 20 0.0016 0.097 13.2 0.3 2 20 598 616 597 619 0.92 8 20 0.018 1.1 9.8 3.1 1 23 625 647 625 647 0.97 9 20 6.5e-05 0.004 17.6 2.5 1 23 654 676 654 676 0.97 10 20 1.8 1.1e+02 3.6 4.9 1 19 682 700 682 705 0.81 11 20 0.082 5 7.8 0.8 1 23 1060 1082 1060 1082 0.97 12 20 0.0037 0.23 12.0 1.2 1 23 1089 1112 1089 1112 0.93 13 20 7.7 4.8e+02 1.6 0.3 1 23 1116 1138 1116 1138 0.84 14 20 0.078 4.8 7.9 1.0 1 23 1143 1166 1143 1166 0.98 15 20 0.039 2.4 8.8 1.9 2 23 1171 1193 1170 1193 0.94 16 20 0.32 20 5.9 0.2 3 23 1284 1305 1282 1305 0.96 17 20 0.0078 0.48 11.0 0.6 2 20 1321 1339 1320 1342 0.92 18 20 5.9e-05 0.0036 17.7 3.1 1 23 1348 1370 1348 1370 0.99 19 20 0.00045 0.028 14.9 2.8 1 23 1377 1399 1377 1399 0.98 20 20 0.0071 0.44 11.1 4.9 1 23 1405 1428 1405 1428 0.90
Sequence Information
- Coding Sequence
- ATGAGGTGCAGCGTTCTTGATTGTATCAATGACACCAAGACGACGACCAAATGTCATGGAATTACATTTCACTTGTTCCCAAAAGAACCAAATCTTCGTACAATGTGGGTTAAAGCCCTGGGAATGACAGACTGGGAGCCAAAAGACAGGAGTACAATCTGTTCAGAGCACTTTCGTGACGAGGACTTCTATGAGACCAAGACTGGCTTACGGAAGATTAAGAGTGGTGCTGTTCCAATGGTGGCAAAGgatTGCACAGATGAGCTTGATGAGCCTGCTGCTTTCAGGGTCTGTCGGATATGCCTCGCCATAGATGTTAAGATGTACGACTTGGGAGATTACGACCTCGATGACATGTATGAACAGATCACAGGAATATTGgTAATAGGAGAGGAGCGACTGCCACAGCGTGTGTGCTATGAGTGCGCGGCTCGGCTCTCCTCCGCCATCCGTTTCAAGAACAGAGCTACCAGGAGCCTGGAACTGTTGCAAGAAATGCTGCTACGGGATAATTATGTGATAACCATCCGTGATATAATGACACTGAGCTACTCCCATAATAGCTTCAAGTCACCATTAATTCAGAAGGTGTTCGAGAACAGCGACTATGACCTGCACATCCGGGATATCTTCGTGAAAGACGAGGACGTTGAGCACAGTGAAGGCCTGGAGGACGAGGCGAAGGATTTCGAAGAAGGCTCCGAGGTTGAGGTCAAAAATGAAGatAGCACTGAGGAGATATTTATCGAGGAGCTGGAACCTTCTGACGAGGAGAACGACAAGAAGCTGAGCGAAGAGGACGACGAGGATAGCGAGGGGAATGAGGATGTAAAGAGAAAGCGAGAGAATGAATATGACGAGGTCTTACAGAACATCACAGAGAGGTACAAAAAGAACAAGTTTAAACGGCTCGCTGCCGACCTGGACCAGTCGCTGTTCACGGTGACGTCCCTCTCGTACGAGCAGCAGATGGAGGAGGTGCGAGAGAGACAGCACAGCGCGGCTTACCTCAAGGCGCCCTACAAGTGCACCGTCTGCTACCGCGGCTACGAAGACAAGAACAGCTATGAGGCCCACGTACTTCGACATAGCGAGaaatgtGGTTCGTACGAATGCTGCGTGTGCAAGACGCGTCTGAAGACCCAGCGCGCGCTGCGCCACCACCTCACGGCGCGCCACACCGAGCTGTACAGCTGCAACGGCTGCACCTTCCTCACCAAGAACAGGGGAGTAGCAAAAGAACATGAGAAGTGGCACGCCGGCACCACGTACAGATGTCCACATTGTGACGAGGAGTTCGACAAGCGGTCCACCTACCTGGGTCACATCCGCATCAAGCACGTGTCGGACTGTGTGTGCGAGCTGTGCGGCTACACGTTCGTCAGCAAGAAGGGCATCGACGTGCACAAACAGAAGAAACACGTACTCGATGCATCTATGCCGCTGGAGGGTCCATACTGCGACGTGTGTGAAGTCAAGTTTATTTCAGAGGACGCCTTCGACAGACATCTGATGTTGTCATCGAGACACAGCAGCGATCATGATCCGAATCGTATCAGGAACTGCTTCCAGAGTATGAACAGGAAACCCAAGGGTCGGATGAAGAGTCGGATAGAGCGGCGCCCCGTCATCCACCGGCTCAGTCCACAGGACGTGGTACAACTCAACGAACCCATCAACTGCGAACAGTGTGATCTACTACTGCCGGATCTCCGGTCGTACGCGCAGCACTTTAGGCGAGCCCATCCGGACAAAAATCGAACCAAGTTCCCTTCCAAAAGAACGCCCTGTATGTGTGAGCTATGTGGCAAGATATTCCGGATGatgtcgctcctagaagcccaCATGTGGGTCCACACAGGCGAGAAGCGCTACAAGTGTGACTGCTGCATGAAGAGCTTCACCCAGAAGGCGTACCTGGTGGACCACCTCAGGCTCCACAGCGCTAAGAAGCCCACGTACGAGTGTCCACTCTGTGGGAAACACTTCTCAAATGTGAACAACCGCAAAAGACATATGTTTCTCCACACAGGTCTGAAGCCTTTCAAATGTGAGACTTGCGGTAAGTGTTCGACCACACTGGGCGAGCACAAGATTCACTTCGAACATGTTCATCAGAAAAAACCCTGGCCCAAGCGCACCAGACCCAGGCGGGGGAAAAAGCAGGCGGGCGACGACGAGTCGTTTCCGAAAGAGCCTAACCTTCGTACAGCGTGGGTCGAAGCCCTGGGTATGGCAGACTGGGAGCCAAAAGACAGAAGTACAATATGTTCCGAACACTTTAGAAATGAAGACTTTTATCAGACCAAAAGAGGGCTGCGGAAGATTAAAGGTGGTGCTGTACCCGTGGTCGCACAGGATTCTGCGGACGATCTAGATGCGCCGGCCGCTTTGAGGGTGTGCAGAATATGTCTCGCCATAGACGTCAAGATGTACGACTTCAGAGACCACAAGATGGATCAAATGTATGAGCAGATCACTGGGCTTTTGACATGCGGTGAGGAGCGGCTGCCCCAGCGCGTCTGTTGGGAGTGTGCGGCGCGACTCACGTCCGCCATTCGCTTCAGGACCAGAGCTTTGAGGAGCTTCCAGCTGTTGCAAGACATGCTTCTACCTGACACCTATATAAAAGTTCGCGACATAAAATCAATAAACCGCTCTCACAGCGGTCTCAGCTCCCCTCTCATCCAGAAGATCTACGACAATAGTGACTACGACCTGCACATCCGGGATGTCCTCGTGAAGGAGGAAGAGCTCCCACCGGAGGCGCCTCCCGACGACGAGGGCCTGGAGGTGGACGCTAAAGACCTCGCGCCTATCACTGAGGTTGAAGTCAAGGATGAAGGTAGCAGCAACGAGATATTCTTCGAAGAGTTTGATCActtcgatgatgatgatgataagactTTAAGCGAAGTGTGCCTGGAGAAGAATAAAGAGAAGGAGAAAATAAAGAAGAGGAAAGAGAAGCCGGTCAAGAGGATTAAACCTAAGAAGTGTGAGGAGGATGACACGCCAGACAATACCACGGACAGATACAAAAAGAACGACGTCAAACGCCGCCGTCAGACGGAGGCGTTGGACGAGACTCTGTTCACCATCACCTCCCTCTCCTACGACCAACAGATAGAGGAAGTCCTCAAGCGGCAGGACAGCACCTCCTACACCAACGCGCCCTACAAGTGCACCATCTGCTACCGAGGGTTTCAAATCAAAGACAGATATACTGCACACGCGATTAGGCACAGTGAGCAAAGCGGGTTGTACGAGTGCTTCATCTGCAAGACGCGGCTGAAGACGAGCCGAGCGCTGCGCAAGCACCTCACGGCTCAGCACACGGAGCAGTACAGCTGCAAGGGCTGCCCCTTCCTCACCAGGAACCGGGGAGTGGCGAGGGAACACGAGAAATGGCACGCCGGCACCAAGTACCAGTGTCCACATTGTGCCAGCGAGTTTGACAAGCTGACCACGTACATGGGCCACATCCGCATCAAGCACGTGTCGGACTGCGTGTGCGAGCTGTGCGGTTACACGTTCGTCAGCAAGAAGGGCATCGACGTGCACAAGAAGAAGAAACACCGGCTCGTTGATAAGTCTGTGACCCTGGATGGTCCATACTGCACGGTATGCGAAGTGAAATTCATCTCGGAGGAGGCTCACGACAGACATCTGATGTTGTCGTCGCGGCACAGCAGCGATCATGACccGAACCGCATCCGCAACGACTCACAGAGTATGAACACGGAGCGGAACGGGCGAGTCGTGCGTAGAATAGAGCGGCGACCCGTCATACACCCGCGGGACCCTCAGGACAGGCTGACGCAGCACGAACCCAACACGCCGGTCAACTGTGAACAGTGCGGCATACAACTGCGGGATCTTCGGTTATACGCACAACACTTCAGACGCGCTCACCCAGACAAGAATCGAACCAAGTACCCGGCGATGAAGACGCCGTGCATGTGCGAGCAGTGTGGAAAAATATTCCAGAGTATGGCGCTCCTCAAGGACCACATGTGGGTCCACACCGGTGAGAAACGTTTCAAATGCGACCGTTGCACCAAGAGTTTCACGCAGAAGACAAACCTGGTGTTCCACATGAGGGTACACAGCGCCTCCAGGCCCACGTACGAGTGTCCGCTGTGTGGGAAGCACTTCGCTTTCTTTAACAACCGAAGGCGGCATATGTTTATCCACACGGGACTGAAGCCTTTCAAATGTGACACTTGCGGAAAATGTTTTACAACATCCGGCGAGCACAGAGCGCACGTTGAACATGTTCATTTGAAGAAGCCTTGGCCGAAGCGAGCGAGACACCGACGTGACTGGAAGTGTGACGCTAATAGTGTAGAAGATTAG
- Protein Sequence
- MRCSVLDCINDTKTTTKCHGITFHLFPKEPNLRTMWVKALGMTDWEPKDRSTICSEHFRDEDFYETKTGLRKIKSGAVPMVAKDCTDELDEPAAFRVCRICLAIDVKMYDLGDYDLDDMYEQITGILVIGEERLPQRVCYECAARLSSAIRFKNRATRSLELLQEMLLRDNYVITIRDIMTLSYSHNSFKSPLIQKVFENSDYDLHIRDIFVKDEDVEHSEGLEDEAKDFEEGSEVEVKNEDSTEEIFIEELEPSDEENDKKLSEEDDEDSEGNEDVKRKRENEYDEVLQNITERYKKNKFKRLAADLDQSLFTVTSLSYEQQMEEVRERQHSAAYLKAPYKCTVCYRGYEDKNSYEAHVLRHSEKCGSYECCVCKTRLKTQRALRHHLTARHTELYSCNGCTFLTKNRGVAKEHEKWHAGTTYRCPHCDEEFDKRSTYLGHIRIKHVSDCVCELCGYTFVSKKGIDVHKQKKHVLDASMPLEGPYCDVCEVKFISEDAFDRHLMLSSRHSSDHDPNRIRNCFQSMNRKPKGRMKSRIERRPVIHRLSPQDVVQLNEPINCEQCDLLLPDLRSYAQHFRRAHPDKNRTKFPSKRTPCMCELCGKIFRMMSLLEAHMWVHTGEKRYKCDCCMKSFTQKAYLVDHLRLHSAKKPTYECPLCGKHFSNVNNRKRHMFLHTGLKPFKCETCGKCSTTLGEHKIHFEHVHQKKPWPKRTRPRRGKKQAGDDESFPKEPNLRTAWVEALGMADWEPKDRSTICSEHFRNEDFYQTKRGLRKIKGGAVPVVAQDSADDLDAPAALRVCRICLAIDVKMYDFRDHKMDQMYEQITGLLTCGEERLPQRVCWECAARLTSAIRFRTRALRSFQLLQDMLLPDTYIKVRDIKSINRSHSGLSSPLIQKIYDNSDYDLHIRDVLVKEEELPPEAPPDDEGLEVDAKDLAPITEVEVKDEGSSNEIFFEEFDHFDDDDDKTLSEVCLEKNKEKEKIKKRKEKPVKRIKPKKCEEDDTPDNTTDRYKKNDVKRRRQTEALDETLFTITSLSYDQQIEEVLKRQDSTSYTNAPYKCTICYRGFQIKDRYTAHAIRHSEQSGLYECFICKTRLKTSRALRKHLTAQHTEQYSCKGCPFLTRNRGVAREHEKWHAGTKYQCPHCASEFDKLTTYMGHIRIKHVSDCVCELCGYTFVSKKGIDVHKKKKHRLVDKSVTLDGPYCTVCEVKFISEEAHDRHLMLSSRHSSDHDPNRIRNDSQSMNTERNGRVVRRIERRPVIHPRDPQDRLTQHEPNTPVNCEQCGIQLRDLRLYAQHFRRAHPDKNRTKYPAMKTPCMCEQCGKIFQSMALLKDHMWVHTGEKRFKCDRCTKSFTQKTNLVFHMRVHSASRPTYECPLCGKHFAFFNNRRRHMFIHTGLKPFKCDTCGKCFTTSGEHRAHVEHVHLKKPWPKRARHRRDWKCDANSVED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00157265;
- 90% Identity
- iTF_00157265;
- 80% Identity
- iTF_00157265;