Basic Information

Insect: Arctia plantaginis
Gene Symbol: -
Assembly: None
Location: CADEBC010000135.1:10858759-10867040[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.05 3.1 8.5 5.4 1 23 217 240 217 240 0.96

2 12 0.0072 0.45 11.1 1.9 1 23 249 271 249 271 0.92

3 12 4.7e-05 0.0029 18.0 3.9 2 23 278 299 277 299 0.97

4 12 6.7e-05 0.0041 17.5 3.8 1 23 305 327 305 327 0.97

5 12 0.00034 0.021 15.3 0.3 1 23 336 358 336 358 0.95

6 12 0.0006 0.037 14.5 1.1 2 23 365 386 364 386 0.94

7 12 0.00021 0.013 16.0 5.9 1 23 392 414 392 414 0.98

8 12 5.9e-09 3.6e-07 30.3 0.6 1 23 420 442 420 442 0.99

9 12 7.2e-06 0.00044 20.6 1.0 1 23 448 470 448 470 0.98

10 12 0.00012 0.0075 16.7 0.5 1 23 476 497 476 497 0.97

11 12 0.0063 0.39 11.3 1.3 1 23 503 525 503 525 0.94

12 12 1.2e-06 7.3e-05 23.0 1.5 1 23 531 553 531 553 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.05	3.1	8.5	5.4	1	23	217	240	217	240	0.96
2	12	0.0072	0.45	11.1	1.9	1	23	249	271	249	271	0.92
3	12	4.7e-05	0.0029	18.0	3.9	2	23	278	299	277	299	0.97
4	12	6.7e-05	0.0041	17.5	3.8	1	23	305	327	305	327	0.97
5	12	0.00034	0.021	15.3	0.3	1	23	336	358	336	358	0.95
6	12	0.0006	0.037	14.5	1.1	2	23	365	386	364	386	0.94
7	12	0.00021	0.013	16.0	5.9	1	23	392	414	392	414	0.98
8	12	5.9e-09	3.6e-07	30.3	0.6	1	23	420	442	420	442	0.99
9	12	7.2e-06	0.00044	20.6	1.0	1	23	448	470	448	470	0.98
10	12	0.00012	0.0075	16.7	0.5	1	23	476	497	476	497	0.97
11	12	0.0063	0.39	11.3	1.3	1	23	503	525	503	525	0.94
12	12	1.2e-06	7.3e-05	23.0	1.5	1	23	531	553	531	553	0.99

Sequence Information

Coding Sequence: ATGGAGTCTCAGCCCGCCATGGAAAGTATTCCTACAAAGGAAAATAATGAAACGAAAGAAGAACAGGCCtatatagaaatagaaatacCTTATACTCTCTTTCAGTTTCTTAGCTCAGAGAACTGTAATGTGCAAAGTGTGTGTAGGATATGCCTATCAACAAATAATGATGTGTTATATCCGTTAGTGACTTCAAAGGAAAACAGTTGTTTGATCGACATGTTCATGGCTTTGGTCACCGTACGACCAACACCAGAAGATGGCCTACCATCAAGCATATGTGAACAATGTCAGATGCTTGTGGTGCAGTATTATGATTTCAAGATCAAGTGCCAGAGGTCAGAATGTATGCTTCGGTCAATCTTGAAAGGAGAATTTATCTGTAAGGAGGAGACAGCTGACCAGAGCAACATGCCTGTAGAAGAAGTAGATGCAAATATAGATGCTACAAATGATATCAAAAAAGAAGTGGAGCTTGTAGAAGaTGTCCAATATTTAGAGGAGTTCAAGGAGGATCCCGCTGATAGCAAACTTTGTATAATACAAGAAGGTGAAAACATAAAAAGacgATCATTAAAAAAGGCTTTAAAGGGGTCCCTGAAAAAAGTTTTGTCTGTAAAGAAAAGATTGGAGAAAAACCCAAAGTCATATACATGTATTCATTGTTCTAAGgTATTTGTTAAAGCAAAAACATTTCACATTCACATGAAGAATAAGCATAATATTAGAAAGGAAAAGCGGCCACACCCCTGTACTCAATGTAAAGAGTCATTTGAATCTGAACATGACCTGTTTGTGCACTCAGCTTTACATACTAAGGGTTCTTTGTGGAAATGCAATCAATGTCAGAAGCAATATAAGTCCAAGACGACGTTACGTCGCCACCTGCAGCGTCACATGCTATTCAAGCCACATTCGTGTGCGACGTGCCACAAAACGTTCACGGAGCTATACGCGCTGCGGCGACACGTGCGCGTGCACACGGGCGAGCGTGTCGAGAAAAAGCATGCGTGTCATATCTGTGACAAGAGGTACGCGGAGAGCGGCCTGCTGGCGGCGCACGTGGCGCGTCACGCGGGCGCGCGCCCGTGCGAGTGCGCCGCGTGCCACAAGCGCTTCCCCTCGCCGCGCCTGCTGGCCTCGCACATGCTCGTGCACACCGACGCCAAGCCCTACGCCTGCGACTACTGCGACAAACGgttCCGGCACGAATCGACTCGAAACATCCATCATCGCACACACACTGGCGAGAAACCATACGTCTGTTCCGTCTGCGGAAAGAACTTCATACAGAACTCTAACCTAACTTTACACATGCGAACTCATAcagGTGAACGTCCATATGCGTGTAACATGTGCGAGCGCAAGTTCACATCGGGCTCATCGCTCAAGAGCCATCAACGAATCCACACTGGGGAGCGACCTTACAGCTGTAAGATTTGTGGGAAAAgATTCGCAAGAATGAACTTGGGAGCGCACATGCGCCAGCACACCGGTGAACGTCCTTTTGCATGTAGCGCATGTCCTAAGAAGTTTGTAAACGCTTCGCGACTGCGAGACCATTGTCGAATACACACAGGTGAAAAACCATACGAATGTGAATATTGCACCTCCACATTTGCCACAAAATCGCAATTAGTCAAACATATGAAATCACATAACCcaccaaagaagaaaaataactcTAAACGTGAACTAGTCGTAACGCAACAAGTTCCCTCGGCTAAAGCTGACAACGTTGTCAAGGAAAACGGAGAATTGTTCACTGTTACTGAGGACACCGCAATGGTTGACCAAAGCAATATTGCTAAGAAAATAACTTTAGATGTTGAAGTCCCATTAGAAGTGACTGGCGAGTTAATTCTTCAAGATGATAGCGACATTAAAGCTGAATTGTTGGTTGTAAATAATAGCGGAAATAATTACCCAATAAGTAACAATGACATTTGTTTGAATCctggtaatataaatataataaatggtgAAGTGAATTATGGGAGTGATATGAATCTAGTGACAGTGAACGAAGACGGCGTCAGTATCTCTGCGTCTGCCCTCGAAGGGACCACGGTGAAATTGTACCAGCTCGACCAAAGTTTACTACAAATACACAGTTCTGGCGGTCAACTTACTATTAGTAAAATTACTAGTAAAATGACTGCGAATTTTTAA
Protein Sequence: MESQPAMESIPTKENNETKEEQAYIEIEIPYTLFQFLSSENCNVQSVCRICLSTNNDVLYPLVTSKENSCLIDMFMALVTVRPTPEDGLPSSICEQCQMLVVQYYDFKIKCQRSECMLRSILKGEFICKEETADQSNMPVEEVDANIDATNDIKKEVELVEDVQYLEEFKEDPADSKLCIIQEGENIKRRSLKKALKGSLKKVLSVKKRLEKNPKSYTCIHCSKVFVKAKTFHIHMKNKHNIRKEKRPHPCTQCKESFESEHDLFVHSALHTKGSLWKCNQCQKQYKSKTTLRRHLQRHMLFKPHSCATCHKTFTELYALRRHVRVHTGERVEKKHACHICDKRYAESGLLAAHVARHAGARPCECAACHKRFPSPRLLASHMLVHTDAKPYACDYCDKRFRHESTRNIHHRTHTGEKPYVCSVCGKNFIQNSNLTLHMRTHTGERPYACNMCERKFTSGSSLKSHQRIHTGERPYSCKICGKRFARMNLGAHMRQHTGERPFACSACPKKFVNASRLRDHCRIHTGEKPYECEYCTSTFATKSQLVKHMKSHNPPKKKNNSKRELVVTQQVPSAKADNVVKENGELFTVTEDTAMVDQSNIAKKITLDVEVPLEVTGELILQDDSDIKAELLVVNNSGNNYPISNNDICLNPGNINIINGEVNYGSDMNLVTVNEDGVSISASALEGTTVKLYQLDQSLLQIHSSGGQLTISKITSKMTANF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01198033; iTF_00823283; iTF_00824070; iTF_01360912;
90% Identity: -
80% Identity: -