Basic Information

Insect: Arctia plantaginis
Gene Symbol: -
Assembly: None
Location: CADEBC010000511.1:1938636-1940830[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.19 12 6.7 0.5 5 21 218 234 216 235 0.93

2 12 7.2e-05 0.0045 17.4 0.5 2 23 254 275 253 275 0.97

3 12 0.00032 0.02 15.4 2.4 1 23 301 323 301 323 0.98

4 12 0.00012 0.0071 16.8 0.5 1 23 331 354 331 354 0.92

5 12 0.013 0.83 10.3 1.1 1 23 360 382 360 382 0.98

6 12 0.00041 0.026 15.0 5.3 1 23 388 410 388 410 0.98

7 12 9.8e-07 6e-05 23.3 1.5 1 23 416 438 416 438 0.95

8 12 1.8e-05 0.0011 19.3 0.9 1 23 444 466 444 466 0.99

9 12 8.7e-07 5.3e-05 23.5 0.2 1 23 472 494 472 494 0.98

10 12 1.9e-05 0.0011 19.3 0.4 1 23 500 522 500 522 0.99

11 12 3.5e-05 0.0021 18.4 2.2 1 21 528 548 528 550 0.96

12 12 7.9e-07 4.9e-05 23.6 0.3 1 23 556 578 556 578 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.19	12	6.7	0.5	5	21	218	234	216	235	0.93
2	12	7.2e-05	0.0045	17.4	0.5	2	23	254	275	253	275	0.97
3	12	0.00032	0.02	15.4	2.4	1	23	301	323	301	323	0.98
4	12	0.00012	0.0071	16.8	0.5	1	23	331	354	331	354	0.92
5	12	0.013	0.83	10.3	1.1	1	23	360	382	360	382	0.98
6	12	0.00041	0.026	15.0	5.3	1	23	388	410	388	410	0.98
7	12	9.8e-07	6e-05	23.3	1.5	1	23	416	438	416	438	0.95
8	12	1.8e-05	0.0011	19.3	0.9	1	23	444	466	444	466	0.99
9	12	8.7e-07	5.3e-05	23.5	0.2	1	23	472	494	472	494	0.98
10	12	1.9e-05	0.0011	19.3	0.4	1	23	500	522	500	522	0.99
11	12	3.5e-05	0.0021	18.4	2.2	1	21	528	548	528	550	0.96
12	12	7.9e-07	4.9e-05	23.6	0.3	1	23	556	578	556	578	0.98

Sequence Information

Coding Sequence: atggaaaTAAACCTAGAATTGTTTGATAAAATATGCCGAGTCTGCCTAATACAATCTGTCGAATTGAAATCCCTGTTTACAAATATAGACGGTGACGGTCGGAACTTACTTGAAATACTAGCTTTTACGGCGAATATTGATGTTAAAATTGAAGACAGCCTGCCAAAACAGGTGTGTAGGGCTTGCGAATCTATTATGTGTAAGGCAGACGCATTCAAACGTCGTTGCCTTGAGTCTGAGACCATTTTGCATAATGTTTACCGCAATACAAACGAAGTCACGGAGAAAACAAAATGCATTCAAAACTATTCAATTAAGGATGAAAAGACAGATTTGAAAGAGAAATTATGTGAATATAGTACTCTTGTATCTCCAAATCCTTCAAATAGCGGCTCGCACtatgatttaaataagaaaaacatagaTTTACCAATATGTTCAACAAGTCTTAGTCTCAACAAATTTAGCCAAGAATTCTCTGATAAAGGAGAGCAAACAGTTAAGAAAGAAACACTAAGTATTATTGAAGAAGAGAATCAGTATTTGGACCATTTTGATGATGATCATTTTGACAGTATTCCTTTAGATAGTCTTAAGAAAAACCAAGAAGTGAAAACGGTGAACAAAAAAATAGGTACCCGCTACGAATGCTATTGTCACACACTGTTCTCAGATAAAGACGAATATAATtctcatttaaaagaaaagaaatgtaatgcctacaaaatgttaaaatcaaataaaagtaaacataaaattcaGTGTACAAAGTGTGATAAAGAATTTACTTCTGCAAATGGGTGGAAATACCACCAGAATATTCACAGAGAGGATAGTCCAATCTTACTCCAAAATACAGATAGCAATAAAGACACAAGTTCAAACAACAAAACGGAAACATTCCAATGTTCATTTTGTTtacgaaagtttaaaaataaagtgtctCTCTCCGTTCATGTGCAGAGACATGAAGAAACCAATAGCATAAAACATGTATGTGAAATTTGCAAACGTGAATTTAAATACAAGGCTTATTTAGAAAACCATGTACTAGCTGTACATTCTAGGACAAACGGATTTACTTGTGATATTTGTATGCAAAGTTTCTTGAACAAAGAAGCACTACAGACTCATAAGAAAAGTCATGAAAGTGAAAGAAAGCACCGCTGTTCCGTTTGCAATAAGGCGTTTCAGATGTTATGTACTTTAAAAGaacatatgcgtacacacacaGGTGAAAAGCCTTTTTTATGTTCCCAGTGTGGAAAGGGCTTTAGTCAGAAGACCAATTTAGCTCAACACACGAGAAGACATCAGGGTTTAAAACcgtttaaatgtgaaagttgtGAAAAAAGATTCGTCTCCAAAGGCGAGTTAGATGCTCACACCCGCAAACACAGCGGCGCACACCCATTCGTCTGTGATGATTGTGGGAACGGTTTCACAACTTCAAGTGCTTTGGTCAAACATCGAAGGATCCACACCGGAGAGCGTCCATACCAATGTGATCTGTGCCCCATGAGATTTGCAGCATCCGGTACTTTGAAGAATCACAGAAGGACTCACACCGGCGAGAGACCTTTCCAATGTTCATACTGTGAGAAGGCGTTTGTTCAAAGAAATGATTTGATATCTCATATTAGGTGCCATACTGGCGAGAGGCCATATATCTGTAATCAATGTGGACAGTCTTTTAGAAAAGCCAGCGGGTTGAAAGCTCATGTTAAAATGCATATTAAGAACCCGATAGTAGGAGTGAATGCGATATTAACTAGCATGCACTGTATGGAGCAGTGA
Protein Sequence: MEINLELFDKICRVCLIQSVELKSLFTNIDGDGRNLLEILAFTANIDVKIEDSLPKQVCRACESIMCKADAFKRRCLESETILHNVYRNTNEVTEKTKCIQNYSIKDEKTDLKEKLCEYSTLVSPNPSNSGSHYDLNKKNIDLPICSTSLSLNKFSQEFSDKGEQTVKKETLSIIEEENQYLDHFDDDHFDSIPLDSLKKNQEVKTVNKKIGTRYECYCHTLFSDKDEYNSHLKEKKCNAYKMLKSNKSKHKIQCTKCDKEFTSANGWKYHQNIHREDSPILLQNTDSNKDTSSNNKTETFQCSFCLRKFKNKVSLSVHVQRHEETNSIKHVCEICKREFKYKAYLENHVLAVHSRTNGFTCDICMQSFLNKEALQTHKKSHESERKHRCSVCNKAFQMLCTLKEHMRTHTGEKPFLCSQCGKGFSQKTNLAQHTRRHQGLKPFKCESCEKRFVSKGELDAHTRKHSGAHPFVCDDCGNGFTTSSALVKHRRIHTGERPYQCDLCPMRFAASGTLKNHRRTHTGERPFQCSYCEKAFVQRNDLISHIRCHTGERPYICNQCGQSFRKASGLKAHVKMHIKNPIVGVNAILTSMHCMEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00823273;
90% Identity: -
80% Identity: -