Apln018267.1
Basic Information
- Insect
- Arctia plantaginis
- Gene Symbol
- ZBTB41
- Assembly
- None
- Location
- CADEBC010000958.1:1303534-1321628[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 35 0.04 2.5 8.8 3.3 1 23 241 264 241 264 0.94 2 35 0.0015 0.092 13.3 0.2 2 23 290 312 289 312 0.96 3 35 0.035 2.2 9.0 2.0 1 23 334 356 334 356 0.97 4 35 1.1 66 4.3 2.5 1 23 360 382 360 382 0.85 5 35 0.14 8.9 7.0 1.2 1 23 386 409 386 409 0.94 6 35 0.077 4.8 7.9 4.5 2 23 416 438 415 438 0.95 7 35 0.0023 0.14 12.7 0.2 1 23 445 468 445 468 0.95 8 35 0.0033 0.21 12.2 3.6 3 23 476 496 474 496 0.98 9 35 3.1e-06 0.00019 21.7 2.8 1 23 502 524 502 524 0.98 10 35 0.14 8.8 7.0 0.1 3 23 575 596 573 596 0.94 11 35 0.36 22 5.8 0.2 5 23 620 639 616 639 0.92 12 35 0.00063 0.039 14.5 2.6 2 23 645 667 644 667 0.95 13 35 0.0022 0.13 12.8 0.8 1 23 672 695 672 695 0.96 14 35 0.22 14 6.5 1.0 2 23 698 720 697 720 0.94 15 35 0.095 5.8 7.6 2.1 2 21 727 746 726 747 0.93 16 35 0.016 0.99 10.0 0.5 1 23 807 830 807 830 0.89 17 35 0.4 25 5.6 0.0 3 23 859 880 857 880 0.91 18 35 0.15 9 7.0 0.2 3 23 904 926 902 926 0.94 19 35 0.001 0.063 13.8 0.6 3 20 933 950 931 954 0.90 20 35 0.016 0.98 10.0 0.3 1 23 959 982 959 982 0.97 21 35 0.00069 0.043 14.3 0.2 2 23 988 1010 988 1010 0.94 22 35 0.00025 0.015 15.7 4.7 1 23 1014 1037 1014 1037 0.97 23 35 5.1 3.1e+02 2.2 1.4 1 23 1084 1106 1084 1106 0.92 24 35 0.014 0.85 10.2 0.5 2 23 1177 1199 1176 1199 0.96 25 35 0.00029 0.018 15.5 1.8 1 23 1204 1227 1204 1227 0.94 26 35 6.8 4.2e+02 1.8 2.7 1 23 1231 1254 1231 1254 0.89 27 35 0.13 8.1 7.2 1.3 2 23 1257 1279 1256 1279 0.95 28 35 0.0036 0.22 12.1 3.4 1 23 1353 1376 1353 1376 0.94 29 35 0.00032 0.02 15.4 0.8 1 23 1449 1472 1449 1472 0.97 30 35 8.7e-05 0.0054 17.2 1.1 1 23 1477 1500 1477 1500 0.97 31 35 0.00073 0.045 14.3 1.0 1 23 1507 1530 1507 1530 0.95 32 35 0.0015 0.093 13.3 0.6 1 23 1535 1558 1535 1558 0.95 33 35 6.3e-06 0.00039 20.8 1.4 1 23 1562 1585 1562 1585 0.98 34 35 0.013 0.81 10.3 1.8 2 23 1592 1613 1591 1613 0.97 35 35 0.065 4 8.1 1.6 1 23 1619 1641 1619 1641 0.96
Sequence Information
- Coding Sequence
- ATGGAGTTTGACGAGATAGTGGTGAAGGAGAGCCCGGGGCTATGCCGGTGCTGTCTTTCGGAAGGATGCTACAAGGACTTGGGGTCCGAGTACACTTGGATGAATGAGACTGAGGTTTATGCTGATATGCTGCTCGAATGCTTTGATATCAGCATAACACAACACAATGAAGGCCCCAATGGACCCAACCGTCTCATTTGTGAAGTATGCATCACTCGTCTGCGAGATGCTTGCAATTTCAAGAAGCAAGTGATGGACTCGGAAAAGAAGTTTATTGACATGATGGGTCGAGGCGAATTTAGGCCAAAGATGCTTATCTACCAAGCACAAATGAAATCTGAGAATCCGATAGTCGAGGCACCTGCTGAGGAGACTGAAGTGGAATACTTGGATGATGACATAGACTTTGCTGATGACGCAGAAGAATTGAAAGACGAATCAGAGCCTACAGTCTCAGACATCACAGTTAGTTCTCTACCTATAAAGGGCAAGAGAGGCAGGCCCAAGAAGACTGTTGTTAAAACTGAGAAGAAGGCCAAAGTCTCCAAGGTGGAGGAGAAGCCCAAGAGTTCAAAGGCTGTTACTAAAGGTGAGAAGCGCGCAGAGGCTGCGAGTAAGTCCTCGATGTCATCGACAATGCGCAACAAACTTATGAAGAGAAACGTTATTATCGTTCTAGAAAATTCTACAGCCTTACCATTCAAATGGCAAAGGCAAAACTACCTTTGTTTCTTTTGCCATCTTACTTTTAAAGACACCGAACTACTCAAAGAACATACGAAAAATGAACACCAAAAGTCTAACATAAAAGCAGCCGTTGCTTATTTAAGAAGAGATGAGCGAGTCAAAATTGACGTGTCTGTGTTACAATGCCGGATTTGCGACCAAAAATTTGACGATATATACAAGCTTATAGACCATATAAAGGTCACTCACAACAAAGTCGTCATGGAAGAATATGGGTTTGGTTTAATACCGTACAATTTACATAACGACGTATTCCATTGCGCGATTTGTAAAGAAGAGTTTCAATACTTTGTTAAGTTAAACCAGCATATGAACGAACATTTCGGAAACTACATGTGCGAATCGTGCGGCAAATCATTTTTGAGTCAAGAGCGTTTAAGGTGTCATTCTTTGACGCACGGGTCTAGGTTCCGCTGCAATGTATGCCTGGAAACTTTTAACTCGTTAACTCAAAAGAACAGTCACGAATCCAAAATCCACAATAAAGACAAACTTCTCAAATGTTTCTTCTGCCCTGAAACTTTCACTAATTATAATCAAAGGAAAAAACATCATAACATAACACATGACATTAAAGTACCGGAGTTCAATTGCCCTGTTTGCGGCAAAGTGTTTCAAATTATGAGCAAAATGAAGGTACATTTAAAAGAAGTACATATTAGAGAGAAGAACTTTGGGTGCAATATGTGCGATCAGAAGTTCTTCTCTAGGACACACGTTCAGAAGCATATGATTAAACATTTTGGGGAGAGGGTGCATCAGTGTGAGATATGTAAGAAGTCGTATGCCAGGAAGCAGACTTTACGAGACCATATGCGCATCCATAATAATGATAAGAGCAAAGATATTGCCGAATATTCAGAATTAAGAAAGCATACGAAGTCCCACGGGAATTGCTCCACTCGGGACCATTCTTTGAAAGTGTTGAAGGGTGGGCAAAATATGGAGATCAAAATTGATGTCTCCGACATTGCCTGTGAAATTTGTTCTGAACCATTTCCCTCTTTCGATGAAATCATCAACCATTTACATATTAAGCATAAACTTGAATATGACAAATCAGTAGAAATGGCCATAGAGGAATATAGATTAGTTGATCTCAATTGTATAGTCTGTGAGGAAAAGTTTACGTATTTTGGTTATTTAGTATCTCACGTTAATACAAATCATCCTAAAAATTGTCTTATTTGCGATAAGTGCaatcaaaagtttaataaaaagcgAGACTTGTTCTCTCATATGAAAAATTATCATAGGGATGGAGGATATCAATGTGAGATGTGTCCTCAAGTATTTAGTTCTCTAAACATATTAAGAAAACACAGGAATAATAGACATTTAACTAGGTGTAACATTTGTCATCTCAAGCTACCCTCATCTGCTTTAAAACAAAAGCACATGGAGTTAGAGCACCCGGACGACGGCTCTCTTCAATGTGACAATTGTTTCAAAGAGTTTCATACAAAACAAGGCCTTAGGATGCACAACAGAAAGTGCAAAGGGGAGGGTATTTTcgaatttgcaataaaaaaagaagaatatgtCGCTATGGATATAGATCAAAATTACGACGATCAAGTGAAGCGACCTAGCGTTAAACAAATTCGAGAAAATATAGtcattgtaattaatatgtcCACGGCGATTCcattcaatttttataaaaataaatttaactgttTTTACTGTTCGAAAGACTTCGCAGATTCAGACTTAATGAGGGAACACACTGTATTAGAACACCCTGTGTGTGACGTTAAACAAAAATGCATTCGGAAATGTAGGGAATCAGTTGCTTGTGTCAAAATTGACGTTTCCTCTTTAGCTTGTAAAGTATGTTTTGAGTCTATAAGCGATTTGGATGACTTACTCGACCACTTAATTGCTAAACACAACGCAAACTATGATAAGTCAATTACAACATGTCTCCAGCCCTATAGACTCATCAAAGATCACATGGCGTGTCCAAATTGTCCAGGAGAAGTCTTCCGATTTTTCGGTACACTCCTGAAACATATGAACAATAAACACACGAACAATAACATAATTTGCGTGTATTGCGGTCAAACTTTCCGCCGGGATCAAAATCTTCGCGTACATATATGGAGACACCACCGAGATGGCAGGTTCAAATGTAATATTTGCGGTGCTGAGTGCAATATTCCATCAAGACTATATATGCACATGGCTAGAGCTCATGGTGTTAAGGCAGCTAAGTGTCCAAAATGCCCGGAAAGCTTCGCTACTCAGTATTTGCGTCAGAAACATTTGATAGAAGCCCACGATTGTGGACACAAATGCTCGTATTGCGGAAAACTATTTACACGGAATTCATTTATGAGGGATCATGTGAGAAGAACGCACCTCAAGGAGAAAAATGTTGAATGTTCTATTTGTTCCGAAAGAGAGCCACCAAAGAAAAGTGATAATTATGTAAGGAGGAAGAACCTGCTTACTCTATTCAACAACACCACATTGATACCTTTTAAATGGCGAGGCAAATACCTGTGCTTCTATTGTGGAAATGAAGTTGGTAGTTATAAGCGACTACGAAAGCACACGTACAACCACGGCCTCTGTTCCGACAAAGACAAAGCCATTAGACTCGTGAAATCGGTTGATTCAGAAATTAAAATTGACGTTTCATATATAAAATGCAAATTATGCTGCCAGTCTTTTCTAGATCTGGATAATATTGTGAACCATTTGATCTCAACACATGATTTATCCTTCAATAAAGATGCTAAATTAACAATAACTACGTATAGACTTTTAGACTTGCAATGCTTGCTTTGCGACGAACAATTTGACTATTTTCAGAAACTTGTTAGTCACATGAACACGTCTCATCCTGACAACTCTTTCTTGTGTACGGAATGTGATCAAATGTTCAACAAAATGCGTGATTTGCGCACTCATATGAGAAATTACcacaaaaaagaatatatatgcGTCACGTGCAATGGAACGTTCACTTCCCACGTAGCATTGAGATTTCATAGGCTACATTCTCATCCATCTAGCTGTTACATATGTTTCCAAACTTTCTCTTCAGAGATGAAACGAATCAATCATATGAAAAATGAACATACTGGTGATCAAGTCGAATGTGGATATTGTAAACAACTTTTGCCAAATACTAATGCTGTGTTACGACACGGTGCCAAATGTACTGCTAAAAAAGATCCTGCTCTAGAAACTATTATTGTGGATGATGAAGAAAAGAAAGTAGCTACAAAGGATCTTAGAAATAGCATCGCTACCATCATAAATATGTCCACTGCGATAccgtttaaatttttcataaaattcagATGTTTCTACTGCTCCAAAGATTTTTCCAACTGCGATGGCTTAAAGGAACACACAGTCATGCAGCATCCTCAATGTAACGTAGGTGACAAGTGCATGAAACTCCGCAACAGATATGACGgcaacaaaatcaaaattgatATTGCATCTCTTTCTTGCAAGCTGTGTTACGAACCATTGCTAGACTTAGACACTTTAATTGAACATTTGACGACAGAACACAAGATTCAATTTAATAAGGCTGTCGAAAGTCACCTGcagtcatttaaattaataaaaaacaactacTCATGCCCCCAATGCGACGAGGTTTTCAGATATTTCACTGTACTTCTTAAACACATGAGTAAGAGTCACACTGGTAATAAGTACATTTGCGTGTTCTGCGGCCAATCGTTCAGAACTTACCCCAATCTTCGCTCTCACGTCAAAAGACGTCACAAAGTGTCTACTACCACGTACGAATGTAACAACTGTGACTTAATTTTCACATCGTGCGCCAGCCTAAAACTGCATTTGGGAAAAGACCACGATGTGAAAATGTTCAAATGCATCGATTGCCAGGATAAGTTTTCTACCCAATACTGGTTGCAACGCCACATGCTTGTTGTACACGGTGAGGGATACAAATGCACTTATTGTGATAaggcttttattaaaaactccTTCCTGGTAAATCATGTGCGGCGATTGCACCTAAAAGAAAGGAATGTTAAATGCAAGGTATGCTCTGAAAAGTTCTTCGATCGGCAAAGACTGAAGATGCACATGGTTAAGCACGTTGGAGAAAGAAATTTCCATTGCGATATTTGCTCGAAAAGGTTTCTGTGGAAGCGCAATCTGAAGGCCCATATTGCTTCACATGCGAGAAACGCAAACGCTCAAACTGGCATCACCTAA
- Protein Sequence
- MEFDEIVVKESPGLCRCCLSEGCYKDLGSEYTWMNETEVYADMLLECFDISITQHNEGPNGPNRLICEVCITRLRDACNFKKQVMDSEKKFIDMMGRGEFRPKMLIYQAQMKSENPIVEAPAEETEVEYLDDDIDFADDAEELKDESEPTVSDITVSSLPIKGKRGRPKKTVVKTEKKAKVSKVEEKPKSSKAVTKGEKRAEAASKSSMSSTMRNKLMKRNVIIVLENSTALPFKWQRQNYLCFFCHLTFKDTELLKEHTKNEHQKSNIKAAVAYLRRDERVKIDVSVLQCRICDQKFDDIYKLIDHIKVTHNKVVMEEYGFGLIPYNLHNDVFHCAICKEEFQYFVKLNQHMNEHFGNYMCESCGKSFLSQERLRCHSLTHGSRFRCNVCLETFNSLTQKNSHESKIHNKDKLLKCFFCPETFTNYNQRKKHHNITHDIKVPEFNCPVCGKVFQIMSKMKVHLKEVHIREKNFGCNMCDQKFFSRTHVQKHMIKHFGERVHQCEICKKSYARKQTLRDHMRIHNNDKSKDIAEYSELRKHTKSHGNCSTRDHSLKVLKGGQNMEIKIDVSDIACEICSEPFPSFDEIINHLHIKHKLEYDKSVEMAIEEYRLVDLNCIVCEEKFTYFGYLVSHVNTNHPKNCLICDKCNQKFNKKRDLFSHMKNYHRDGGYQCEMCPQVFSSLNILRKHRNNRHLTRCNICHLKLPSSALKQKHMELEHPDDGSLQCDNCFKEFHTKQGLRMHNRKCKGEGIFEFAIKKEEYVAMDIDQNYDDQVKRPSVKQIRENIVIVINMSTAIPFNFYKNKFNCFYCSKDFADSDLMREHTVLEHPVCDVKQKCIRKCRESVACVKIDVSSLACKVCFESISDLDDLLDHLIAKHNANYDKSITTCLQPYRLIKDHMACPNCPGEVFRFFGTLLKHMNNKHTNNNIICVYCGQTFRRDQNLRVHIWRHHRDGRFKCNICGAECNIPSRLYMHMARAHGVKAAKCPKCPESFATQYLRQKHLIEAHDCGHKCSYCGKLFTRNSFMRDHVRRTHLKEKNVECSICSEREPPKKSDNYVRRKNLLTLFNNTTLIPFKWRGKYLCFYCGNEVGSYKRLRKHTYNHGLCSDKDKAIRLVKSVDSEIKIDVSYIKCKLCCQSFLDLDNIVNHLISTHDLSFNKDAKLTITTYRLLDLQCLLCDEQFDYFQKLVSHMNTSHPDNSFLCTECDQMFNKMRDLRTHMRNYHKKEYICVTCNGTFTSHVALRFHRLHSHPSSCYICFQTFSSEMKRINHMKNEHTGDQVECGYCKQLLPNTNAVLRHGAKCTAKKDPALETIIVDDEEKKVATKDLRNSIATIINMSTAIPFKFFIKFRCFYCSKDFSNCDGLKEHTVMQHPQCNVGDKCMKLRNRYDGNKIKIDIASLSCKLCYEPLLDLDTLIEHLTTEHKIQFNKAVESHLQSFKLIKNNYSCPQCDEVFRYFTVLLKHMSKSHTGNKYICVFCGQSFRTYPNLRSHVKRRHKVSTTTYECNNCDLIFTSCASLKLHLGKDHDVKMFKCIDCQDKFSTQYWLQRHMLVVHGEGYKCTYCDKAFIKNSFLVNHVRRLHLKERNVKCKVCSEKFFDRQRLKMHMVKHVGERNFHCDICSKRFLWKRNLKAHIASHARNANAQTGIT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -