Apln003954.1
Basic Information
- Insect
- Arctia plantaginis
- Gene Symbol
- LUC7L3
- Assembly
- None
- Location
- CADEBC010000426.1:2239522-2269864[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 9.5e-05 0.0059 17.0 2.2 1 23 427 449 427 449 0.97 2 20 0.0049 0.3 11.6 0.6 1 20 455 474 455 477 0.94 3 20 2.5e-05 0.0015 18.9 5.6 1 23 496 518 496 518 0.98 4 20 0.00012 0.0071 16.8 4.1 1 23 524 546 524 546 0.99 5 20 4.4e-05 0.0027 18.1 5.3 1 23 552 574 552 574 0.97 6 20 1.1e-05 0.00069 20.0 7.9 1 23 580 602 580 602 0.97 7 20 8.5e-07 5.2e-05 23.5 2.9 1 23 608 630 608 630 0.97 8 20 0.00012 0.0074 16.7 6.7 1 23 636 658 636 658 0.97 9 20 0.00016 0.01 16.3 6.7 1 23 664 686 664 686 0.97 10 20 5.8e-07 3.6e-05 24.0 1.9 1 23 692 714 692 714 0.98 11 20 5.9e-05 0.0036 17.7 7.9 1 23 720 742 720 742 0.98 12 20 4.9e-05 0.003 18.0 6.8 1 23 748 770 748 770 0.98 13 20 2.3e-06 0.00014 22.1 4.2 1 23 776 798 776 798 0.98 14 20 3.4e-06 0.00021 21.6 6.1 1 23 804 826 804 826 0.97 15 20 1.9e-06 0.00012 22.4 4.1 1 23 832 854 832 854 0.98 16 20 3.6e-06 0.00022 21.5 6.0 1 23 860 882 860 882 0.98 17 20 0.00011 0.0065 16.9 7.5 1 23 888 910 888 910 0.97 18 20 1.8e-05 0.0011 19.3 6.3 1 23 916 938 916 938 0.96 19 20 0.0014 0.086 13.4 0.9 1 23 945 967 945 967 0.96 20 20 0.02 1.3 9.7 5.3 1 23 979 1001 979 1001 0.99
Sequence Information
- Coding Sequence
- ATGAATCCCGAGCACCATAGTATGACCACGGGTGGTGGCCAGCCACCGGGAAGTTCTGAGtcTCAGAATCAAAGAGTTCAATCTGCTCAGCAACAACAGCAAAATAACTTGCCTGCCACGACATCTGCTACTGATCTGCGAGTGAACTCTGTGAACTCGGCTGTGAATGTCGCTTTGTCCAGTGTAGCAAAATATTGGgtgtttacaaatttatttcctgGACCTATACCACAAGTTTCAGTGTATGGATTACCTGCTGGTGCCAGAATTGAAAATGGAAAACCTGTAcagGATCTCGGTCAAGCTCATGCGAGCATACTTAATGGAGATCCAAATATTATACTTGGCCACCATGCTGGCCAATCTCAAGTCACAGTGTCAGCTGCAGGAGGTCAGCAAATACCAGTTTCACAGATCATTGCTACTCAGTCCGGTCAAACACATGAAACTCTTGTGGCTCACAGTCAACAAGCAGAACTGGCAGCTGCTCAGGGAGCCAACAACGCACAGGTGTCAGTTAGCACAGGCCAGCCTACCCATCAGCAGGTACCCACTAATCGGGTCGAGTTTGTACAACACCATAACATTGATATGGGACATCATTCACAACAACACCTTATGCAACAACAACTCATGACTACAGCACGTCCAGAGCATAGCAATCAGCAGATACAACTGACAGTAAGCGAAGATGGTATTGTAACTGTAGTGGAACCGGCTGGCAGTAAGCTGGTGGACAAGGAAGAACTTCACGAGGCCATTAAGATGCCTGGCGATCATGGGCTCACTGTACATCAGCTTCAGCAAATAGTTGGACAACAGTCACATATTTCGAACCAGGTGATAGACAGCGTAGTTCGAATAGAGCAAGCTACTGGTGAGCCAGCTAACATACTAGTGACACACAACCCTGATGGTACGACGTCAATAGAAGCGGAGTCTCTCATCGTCAAGGATGAAAAGAACTCTTCAAAGATGGAAACAGCACAGTTTGCGATACCGACGGAAATTAAGGATATCAAAGGCATAGATTTAAAGAATGTGGGGTCTATGGGAATGGAAGGTGCAGTTGTCAAGATCTCAGCCGGTGCATCAGAACATGATCTTCATGCTATGTACAAAGTGAATGTGGAAGATCTCTCACAATTACTAGCTTACCATGAAGTCTTTGGAAAGTTAAATTCTGATGGACAACAGCAAGCTAaggTTATAACCGAAGTTGAAGTAGAGGCAGGTACGAGCGCTGCGATGTCAGAAGCAGAGTCATCGCCCGGCCATCATTCTTGTGATATTTGCGGAAAAATATTCCAATTTCGATATCAACTCATTGTTCATAGGCGCTATCATGGCGAAAGCAAACCATTTACGTGTCAAGTTTGCGGTTCAGCTTTTGCTAATCCTGTAGAGTTATCGAGACACGGGAAATGCCATCTTGCAGGTGATCCTAATGAGAGACATGCTAAAAGAATGGCACAAGATAAGCCGTATGCCTGTACTACTTGTCACAAAACATTTTCGAGAAAGGAACACTTAGACAATCACGTTCGGAGTCATACTGGGGAGACGCCTTACAGATGCGAGTTCTGCGCAAAAACTTTTACCCGTAAAGAGCACATGGTGAACCACGTGCGTAAACACACGGGAGAAACGCCCCATCGCTGCGACATTTGTAAGAAGAGCTTTACAAGAAAAGAACACTTCATGAACCATGTCATGTGGCATACAGGTGAAACGCCGCACCATTGTCAAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAATGAATCATATGAGGTCTCATACAAATGACACCCCCTTCCGATGCGAACTGTGCGGGAAATCGTTCACAAGAAAGGAACACTTCACCAATCACATATTGTGGCATACGGGTGAAACACCACATCGCTGCGATTTCTGCTCGAAAACATTTACACGTAAAGAACACTTATTAAACCACGTTCGTCAGCACACTGGCGAGTCACCACACAGATGTACTTTCTGCAGCAAATCTTTCACTCGGCGAGAACATCTAGTTAATCATGTTCGGCAGCATACGGGAGAAACTCCTTTCCAGTGTGGATACTGTCCTAAAGCATTCACCAGAAAGGATCATCTGGTGAACCACGTTCGGCAGCATACAGGGGAATCTCCACACAAGTGTTCGTTCTGTACAAAGTCGTTTACCCGTAAGGAGCATCTTACGAACCACGTGCGACAACACACCGGCGAGTCACCTCATCGTTGCACCTTCTGCGCTAAGTCTTTTACAAGAAAAGAACATCTTACCAATCATATCAGACAGCACACGGGTGAAACGCCACACAAGTGCACGTACTGTCCGCGCGCGTTCGCTCGCAAGGAGCACCTCAACAACCACATCCGCCAGCACACTGGCGTCACGCCGCACTCCTGCTCCTACTGCAACAAGAGCTTCACCCGGAAGGAACATCTCGTCAATCACATACGACAACACACGGGCGAAACACCATTCAAATGCACATACTGTGCCAAATCGTTTTCTCGTAAGGAACATTTGACGAATCACATAAATCTTCATACGGGAGAGACGCCGCACAAGTGTCCCTTCTGCACCAAAACTTTCTCAAGAAAGGAACATTTGACAAACCACGTCAGAATTCATACAGGCGAGTCACCACATCGTTGTGGGTTTTGCCAGAAAACATTTACACGAAAAGAACATCTAACTAACCACTTAAAACAACATACTGGCGACACTGCGCATGCGTGTAAAGTATGTTCAAAACATTTCACCAGAAAAGAACATCTTGTAGCACACATgagATCGCACAGTTGCGGTGAACGGCCGCACACTTGTGGAGAATGTGGTAAATCGTTTCCATTGAAAGGGAACCTTTTATTCCACGAACGCTCTCACAATAAGGCTAACGCCAATAACGCTAACAGACCATACCGGTGTGAAGTTTGCTCCAAGGAATTCATGTGTAAAGGACATCTGGTGACGCACAGGCGAACCCACACGGAGCAGGGCGAGGGCGCGCCGCCCAGTGCGGAGGCGGCGCCCGAACCTGACGACTGCACTGACTGCAATAAGTGTATCAAAGCAGAGCCCGAGCATACTGACAGAAAACTCGAAATCAGaTTAGATTTCCTACTAGAATTAGTTATTAAGGTAGTAATAATGGCGGTACTAGCCGCGGCTCAGCTGCTCGACGAGTTAATGGGTAGACATCGGAATACAAATCCTAATGAAAAAATCAAGAAGCCAAATTGGGAAGATCCTGAGTACTGTAAATATTACATGGTGAAGTTTTGTCCACAtgatttgtttgtaaatactaGAGCAGATCTCGGAGTTTGCCCTAAAGTGCATGATGATGAAGTTAAAGTGTTGTTTGATAAATGTGAGGTGTCATATAAGAAAGCACAATATGTTGAAGAATTCCTACGCTTTTGTCGCCACATGATCAATGATGTAgaaagaaaaatacaaaaaggtaAACAGAGGTTAGAACTAATGAATTCAAAACCTGAGGGTCCTCCAATGACTCAAGcccaaacagaaaaaaatcaaGAACAGgtGCAATTGCTATCAGAAAAAATTACTGCTTTGGTCCAAGAAGCTGAAGAAGCAGGGACAAGAGGAGATGTTGAACAAGCACAAGGGCTGATGAAACTCTGTGACAGGCTGAAGGAAGAAAAGGAACAGTTACTTAAACAACAAGAGAACAGCCACTGGTCCATGACAGCTGAACTAGCGGCAGCGCAAGAAAAACAAATGGAAGTATGTCCAGTGTGCGGCGCGTTCTTGATCGTTGGCGACGCGCAACAACGTATCGACGACCATCTTTCTGGGAAACAACATGTTGGATACTTTAAGCTTCGTCAAGCCTACGAAGAAATGATCGAATCGCGTGAAAAAGAACAACAAGAAAAAGAACGAAGGCGTAGGGAGGAAAGAGAAAGAGATCGTAGTGCTCGGAGTGGGGGTCTCGGGTCTGATCGGCGCGATCGTGAGCGTATGGAGCGTGACCGCGAACGTGATAGAGATCGTAGCGATCGTGGTGATAGAGATCGTGAACGGGAAAAAGAACGAGAAAAAGATAGGGATAAGGATAGAGAAAAGGACAGAGATAGGGAACGGGATAGAGACAGGGAAAGTCATCGCACCCGCGAGAAGTCGAGCCGCCATGAGGACCGCGATAGGGAACGGGAGCGCGATCGTGACAAGGACAGGGATCGCGAGCGCGACCGCAAGCACCGCAAGGAGAGAAGATCATCTCACGAGCGCTCGCGGCGACGTTCGCGCGACCGCCACTAG
- Protein Sequence
- MNPEHHSMTTGGGQPPGSSESQNQRVQSAQQQQQNNLPATTSATDLRVNSVNSAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPAGARIENGKPVQDLGQAHASILNGDPNIILGHHAGQSQVTVSAAGGQQIPVSQIIATQSGQTHETLVAHSQQAELAAAQGANNAQVSVSTGQPTHQQVPTNRVEFVQHHNIDMGHHSQQHLMQQQLMTTARPEHSNQQIQLTVSEDGIVTVVEPAGSKLVDKEELHEAIKMPGDHGLTVHQLQQIVGQQSHISNQVIDSVVRIEQATGEPANILVTHNPDGTTSIEAESLIVKDEKNSSKMETAQFAIPTEIKDIKGIDLKNVGSMGMEGAVVKISAGASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNSDGQQQAKVITEVEVEAGTSAAMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPNERHAKRMAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLMNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTFCAKSFTRKEHLTNHIRQHTGETPHKCTYCPRAFARKEHLNNHIRQHTGVTPHSCSYCNKSFTRKEHLVNHIRQHTGETPFKCTYCAKSFSRKEHLTNHINLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCGFCQKTFTRKEHLTNHLKQHTGDTAHACKVCSKHFTRKEHLVAHMRSHSCGERPHTCGECGKSFPLKGNLLFHERSHNKANANNANRPYRCEVCSKEFMCKGHLVTHRRTHTEQGEGAPPSAEAAPEPDDCTDCNKCIKAEPEHTDRKLEIRLDFLLELVIKVVIMAVLAAAQLLDELMGRHRNTNPNEKIKKPNWEDPEYCKYYMVKFCPHDLFVNTRADLGVCPKVHDDEVKVLFDKCEVSYKKAQYVEEFLRFCRHMINDVERKIQKGKQRLELMNSKPEGPPMTQAQTEKNQEQVQLLSEKITALVQEAEEAGTRGDVEQAQGLMKLCDRLKEEKEQLLKQQENSHWSMTAELAAAQEKQMEVCPVCGAFLIVGDAQQRIDDHLSGKQHVGYFKLRQAYEEMIESREKEQQEKERRRREERERDRSARSGGLGSDRRDRERMERDRERDRDRSDRGDRDREREKEREKDRDKDREKDRDRERDRDRESHRTREKSSRHEDRDRERERDRDKDRDRERDRKHRKERRSSHERSRRRSRDRH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -